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Full identifier: https://w3id.org/np/RAG8znTopkvHhG060PKv0CP-Db-iWBncbDePPFdoUfNvU/sig

Minted in Nanopublication

 RAG8znTopk RoCrate comment approve/disapprove edit as derived nanopublication

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arcp://name,uts_public_data_repo/ce2f83c013a711edb084ed90e8a0b9fc ce2f83c013a711edb084ed90e8a0b9fc http://schema.org/description description "Rhometa includes various models to perform population recombination rate estimation on metagenomic datasets. It is primarily built using nextflow, a workflow management tool and the python programming language. Here a repository of all the results generated for Rhometa and the scripts used is provided. In some cases, different pipelines were used during the course of developing rhometa such as our nextflow LDhat pipeline. LDHat is a population recombination rate estimation program for aligned sequences and simulation pipelines etc, all relevant scripts and nextflow works are included where applicable. The github repositories for all pipelines are provided in the accompanying manuscript. File names starting with “figure” are all related to the evaluation of different forms of simulated data. The simulated files are not included to save space, but the scripts used to generate the files are and final results are included. The file Lookup_tables.zip is related to all the lookup tables used during the analysis. Lookup tables themselves are very large and as such are not included, but all relevant scripts used to generate them are. The file s_pneumoniae.zip is related to the analysis of a real dataset involving an S. pneumoniae transformation experiment. Experiment accession codes are included but not bam files and the reference. The details of how the BAM was generated and the reference file used are described in the manuscript. All results and scripts used are included." .
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This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../sig
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"RSA"
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0009-0008-3635-347X, 18 Jul 2025, 12:16:56 UTC

References

Nanopublication Part Subject Predicate Object Published By Published On
links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo
sig
RSA
(unknown)
2025-07-18T12:16:56.792Z
links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo
sig
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2025-07-18T12:16:56.792Z
links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo
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2025-07-18T12:16:56.792Z
links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo
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(unknown)
2025-07-18T12:16:56.792Z
links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo
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(unknown)
2025-07-18T12:16:56.792Z

Raw

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