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_4

Full identifier: https://w3id.org/np/RAG8znTopkvHhG060PKv0CP-Db-iWBncbDePPFdoUfNvU/_4

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Minted in Nanopublication

 RAG8znTopk RoCrate comment approve/disapprove edit as derived nanopublication

This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_1 _1 http://schema.org/identifier identifier (this is a literal) "_:FOR/08" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_1 _1 http://schema.org/name name (this is a literal) "08 - INFORMATION AND COMPUTING SCIENCES" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_1 _1 http://schema.org/url url (this is a literal) "_:FOR/08" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_2 _2 http://schema.org/identifier identifier (this is a literal) "_:FOR/06" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_2 _2 http://schema.org/name name (this is a literal) "06 - BIOLOGICAL SCIENCES" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_2 _2 http://schema.org/url url (this is a literal) "_:FOR/06" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_3 _3 http://schema.org/contactType contactType (this is a literal) "Data Manager" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_3 _3 http://schema.org/email email (this is a literal) "sidaswar.krishnan-1@student.uts.edu.au" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_3 _3 http://schema.org/identifier identifier (this is a literal) "_:contact/sidaswar.krishnan-1@student.uts.edu.au" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_3 _3 http://schema.org/name name (this is a literal) "" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_4 _4 http://schema.org/name name (this is a literal) "public_ocfl" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_4 _4 http://schema.org/value value (this is a literal) "ce2f83c013a711edb084ed90e8a0b9fc" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_5 _5 http://schema.org/name name (this is a literal) "repository" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_5 _5 http://schema.org/value value (this is a literal) "arcp://name,uts_public_data_repo/ce2f83c013a711edb084ed90e8a0b9fc" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_6 _6 http://schema.org/name name (this is a literal) "http://creativecommons.org/licenses/by-sa/4.0" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_6 _6 http://schema.org/url url (this is a literal) "http://creativecommons.org/licenses/by-sa/4.0" .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../_7 _7 http://schema.org/name name (this is a literal) "Attribution 4.0 International (CC BY 4.0)" .
arcp://name,uts_public_data_repo/ce2f83c013a711edb084ed90e8a0b9fc ce2f83c013a711edb084ed90e8a0b9fc http://schema.org/description description "Rhometa includes various models to perform population recombination rate estimation on metagenomic datasets. It is primarily built using nextflow, a workflow management tool and the python programming language. Here a repository of all the results generated for Rhometa and the scripts used is provided. In some cases, different pipelines were used during the course of developing rhometa such as our nextflow LDhat pipeline. LDHat is a population recombination rate estimation program for aligned sequences and simulation pipelines etc, all relevant scripts and nextflow works are included where applicable. The github repositories for all pipelines are provided in the accompanying manuscript. File names starting with “figure” are all related to the evaluation of different forms of simulated data. The simulated files are not included to save space, but the scripts used to generate the files are and final results are included. The file Lookup_tables.zip is related to all the lookup tables used during the analysis. Lookup tables themselves are very large and as such are not included, but all relevant scripts used to generate them are. The file s_pneumoniae.zip is related to the analysis of a real dataset involving an S. pneumoniae transformation experiment. Experiment accession codes are included but not bam files and the reference. The details of how the BAM was generated and the reference file used are described in the manuscript. All results and scripts used are included." .
arcp://name,uts_public_data_repo/uts_root_collection uts_root_collection http://schema.org/description description "This is the UTS Research Data Portal. For any questions, please get in touch with us at eResearch-it@uts.edu.au" .
git+https://github.com/Arkisto-Platform/oni-ocfl.git oni-ocfl.git http://schema.org/name name "git+https://github.com/Arkisto-Platform/oni-ocfl.git" .
This is the identifier for this whole nanopublication. https://w3id.org/np/RAG8znTopk... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal) "2025-07-18T14:16:56.792+02:00" (xsd:dateTime) .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../sig sig http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. https://w3id.org/np/RAG8znTopk... this nanopublication .
This is a local identifier minted within the nanopublication. https://w3id.org/np/RAG8znTopk.../sig sig http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal) "RSA" .

0009-0008-3635-347X, 18 Jul 2025, 12:16:56 UTC

References

Nanopublication Part Subject Predicate Object Published By Published On
links a nanopublication to its assertion http://www.nanopub.org/nschema#hasAssertion assertion
_4
(unknown)
2025-07-18T12:16:56.792Z
links a nanopublication to its assertion http://www.nanopub.org/nschema#hasAssertion assertion
_4
public_ocfl
(unknown)
2025-07-18T12:16:56.792Z
links a nanopublication to its assertion http://www.nanopub.org/nschema#hasAssertion assertion
_4
ce2f83c013a711edb084ed90e8a0b9fc
(unknown)
2025-07-18T12:16:56.792Z
links a nanopublication to its assertion http://www.nanopub.org/nschema#hasAssertion assertion
arcp://name,uts_public_data_repo/ce2f83c013a711edb084ed90e8a0b9fc
_4
(unknown)
2025-07-18T12:16:56.792Z

Raw

TriG(txt), JSON-LD(txt), N-Quads(txt), XML(txt)