assertion (explore)

assertion

Full identifier: https://w3id.org/np/RARhEnvsUzWmW9AzNfZoPFU05rMpsy1Tj02grJWohM8Bs/assertion

Searching for classes... Loading...

Searching for term descriptions... Loading...

use this template

Searching for instances... Loading...

Searching for parts... Loading...

Searching for templates... Loading...

Minted in Nanopublication

Expressing an association between an organism and a nucleotide sequence (extended) AssertionTemplate comment approve/disapprove edit as derived nanopublication create new with same template use template

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/AssertionTemplate assertion template .

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"Expressing an association between an organism and a nucleotide sequence (extended)"

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion http://purl.org/dc/terms/description has the description (this is a literal)

Such a nanopublication expresses an association between an organism (normally identified as belonging to a certain taxon concept) and a nucleotide sequence (that can correspond to a gene or subunit of a gene), for example expressing that Sequence ID (INSDC / Genbank accession number or BOLD Process ID) identifies Organism X as belonging to a Taxon Concept Y.

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion https://w3id.org/np/o/ntemplate/hasTag has tag (this is a literal)

"Biodiversity"

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion https://w3id.org/np/o/ntemplate/hasDefaultProvenance has default provenance http://purl.org/np/RAYfEAP8KA...

RAYfEAP8KA

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion https://w3id.org/np/o/ntemplate/hasTargetNanopubType has the target nanopub type https://w3id.org/kpxl/biodiv/terms/BiodivNanopub

BiodivNanopub

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion assigns a pattern used to generate a human-readable label for the whole nanopublication https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern has the nanopub label pattern (this is a literal)

"Organism of ${taxonname} - ${relation} - ${nucleotidesequence}"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st00

st00

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st00

st00

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/1999/02/22-rdf-syntax-ns#type

is a

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st00

st00

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object https://w3id.org/kpxl/biodiv/t...oNucleotideSequenceAssociation

OrganismToNucleotideSequenceAssociation

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st05

st05

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st05

st05

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/predicate

predicate

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st05

st05

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st09

st09

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st09

st09

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/subject

subject

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st09

st09

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st10

st10

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st10

st10

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/1999/02/22-rdf-syntax-ns#type

is a

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st10

st10

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxon

taxon

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st11

st11

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxon

taxon

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st11

st11

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasTaxonName

hasTaxonName

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st11

st11

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxonname

taxonname

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st12

st12

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxon

taxon

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st12

st12

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition

hasTaxonConceptDefinition

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st12

st12

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxondef

taxondef

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st20

st20

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st20

st20

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasLifeCycleStage

hasLifeCycleStage

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st20

st20

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st25

st25

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st25

st25

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasOccurrence

hasOccurrence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st25

st25

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../occurrence

occurrence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st30

st30

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st30

st30

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/2002/07/owl#sameAs

sameAs

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st30

st30

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organismAlt

organismAlt

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st80

st80

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st80

st80

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/2003/01/geo/wgs84_pos#location

location

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st80

st80

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../location

location

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st81

st81

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st81

st81

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasLocationCoordinates

hasLocationCoordinates

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st81

st81

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../coordinates

coordinates

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st82

st82

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st82

st82

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/timepoint

timepoint

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st82

st82

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../timepoint

timepoint

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st83

st83

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st83

st83

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasSampleType

hasSampleType

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st83

st83

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sampleType

sampleType

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st85

st85

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st85

st85

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/biolink/vocab/object

object

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st85

st85

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../nucleotidesequence

nucleotidesequence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st86

st86

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st86

st86

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasStrainID

hasStrainID

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st86

st86

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../strainid

strainid

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st87

st87

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st87

st87

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate https://w3id.org/kpxl/biodiv/terms/hasIsolationProtocol

hasIsolationProtocol

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st87

st87

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../isolationProtocol

isolationProtocol

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st90

st90

http://www.w3.org/1999/02/22-rdf-syntax-ns#subject has as subject https://w3id.org/np/o/ntemplate/ASSERTION

ASSERTION

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st90

st90

http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate has as predicate http://www.w3.org/2000/01/rdf-schema#comment

comment

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st90

st90

http://www.w3.org/1999/02/22-rdf-syntax-ns#object has as object This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../comment

comment

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion This assertion https://w3id.org/np/o/ntemplate/hasStatement includes This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st00

st00

st05

st09

st10

st11

st12

st20

st25

st30

st80

st81

st82

st83

st85

st86

st87

st90

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st12

st12

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st20

st20

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st25

st25

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st30

st30

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st30

st30

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/RepeatableStatement

repeatable statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st80

st80

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st81

st81

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st82

st82

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st83

st83

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st86

st86

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st86

st86

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/RepeatableStatement

repeatable statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st87

st87

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../st90

st90

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/OptionalStatement

optional statement

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/IntroducedResource

Introduced resource

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LocalResource

Local resource

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../comment

comment

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder

Long literal placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../coordinates

coordinates

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LiteralPlaceholder

Literal placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../isolationProtocol

isolationProtocol

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder

Restricted choice placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../location

location

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../nucleotidesequence

nucleotidesequence

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../occurrence

occurrence

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LocalResource

Local resource

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organismAlt

organismAlt

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder

Restricted choice placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sampleType

sampleType

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder

Guided choice placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../strainid

strainid

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LiteralPlaceholder

Literal placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxon

taxon

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LocalResource

Local resource

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxondef

taxondef

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder

External URI placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxonname

taxonname

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder

Guided choice placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../timepoint

timepoint

http://www.w3.org/1999/02/22-rdf-syntax-ns#type is a https://w3id.org/np/o/ntemplate/LiteralPlaceholder

Literal placeholder

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

https://w3id.org/np/o/ntemplate/possibleValue has as possible value http://purl.obolibrary.org/obo/BTO_0000487

BTO_0000487

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

https://w3id.org/np/o/ntemplate/possibleValue has as possible value http://purl.obolibrary.org/obo/BTO_0001171

BTO_0001171

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

https://w3id.org/np/o/ntemplate/possibleValue has as possible value https://w3id.org/kpxl/biodiv/terms/hasAssembledNucleotideSequence

hasAssembledNucleotideSequence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

https://w3id.org/np/o/ntemplate/possibleValue has as possible value https://w3id.org/kpxl/biodiv/terms/hasObservedNucleotideSequence

hasObservedNucleotideSequence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

https://w3id.org/np/o/ntemplate/possibleValue has as possible value https://w3id.org/kpxl/biodiv/terms/hasSequencedNucleotideSequence

hasSequencedNucleotideSequence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

https://w3id.org/np/o/ntemplate/possibleValue has as possible value https://w3id.org/kpxl/biodiv/terms/isIdentifiedByNuceotideSequence

isIdentifiedByNuceotideSequence

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

https://w3id.org/np/o/ntemplate/possibleValuesFrom has possible values from http://purl.org/np/RAVZS2MV-s...

RAVZS2MV-s

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sampleType

sampleType

https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal)

"https://www.ebi.ac.uk/ols/api/select?ontology=uberon&q="

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxonname

taxonname

https://w3id.org/np/o/ntemplate/possibleValuesFromApi has possible values from API (this is a literal)

"https://vodex.petapico.org/nidx/query?rows=100&q=label:"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

https://w3id.org/np/o/ntemplate/hasDefaultValue has the default value https://w3id.org/kpxl/biodiv/terms/hasObservedNucleotideSequence

hasObservedNucleotideSequence

http://purl.obolibrary.org/obo/BTO_0000487

BTO_0000487

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"fruit body"

http://purl.obolibrary.org/obo/BTO_0001171

BTO_0001171

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"spore"

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

is a

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"is an instance of"

http://www.w3.org/2000/01/rdf-schema#comment

comment

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the free-text comment"

http://www.w3.org/2002/07/owl#sameAs

sameAs

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"is the same as"

http://www.w3.org/2003/01/geo/wgs84_pos#location

location

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the location"

https://w3id.org/biolink/vocab/object

object

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"links the organism to the nucleotide sequence"

https://w3id.org/biolink/vocab/predicate

predicate

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"refers to the relation"

https://w3id.org/biolink/vocab/subject

subject

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"refers to"

https://w3id.org/biolink/vocab/timepoint

timepoint

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the time stamp - points to the date and time associated with this relation or organism (e.g. date of collection); if occurrence URI is given, this is redundant and does not need to be filled in"

https://w3id.org/kpxl/biodiv/t...oNucleotideSequenceAssociation

OrganismToNucleotideSequenceAssociation

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"an association of an organism to a nucleotide sequence"

https://w3id.org/kpxl/biodiv/terms/hasAssembledNucleotideSequence

hasAssembledNucleotideSequence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"assembled nucleotide sequence"

https://w3id.org/kpxl/biodiv/terms/hasIsolationProtocol

hasIsolationProtocol

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the isolation protocol"

https://w3id.org/kpxl/biodiv/terms/hasLifeCycleStage

hasLifeCycleStage

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the life cycle stage"

https://w3id.org/kpxl/biodiv/terms/hasLocationCoordinates

hasLocationCoordinates

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the location coordinates - points to the location coordinates associated with this relation or organism (e.g. place of collection); if occurrence URI is given, this is redundant and does not need to be filled in"

https://w3id.org/kpxl/biodiv/terms/hasObservedNucleotideSequence

hasObservedNucleotideSequence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"observed nucleotide sequence"

https://w3id.org/kpxl/biodiv/terms/hasOccurrence

hasOccurrence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the occurrence - links an organism to a record of a specific occurrence of it"

https://w3id.org/kpxl/biodiv/terms/hasSampleType

hasSampleType

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the sample type"

https://w3id.org/kpxl/biodiv/terms/hasSequencedNucleotideSequence

hasSequencedNucleotideSequence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"sequenced nucleotide sequence"

https://w3id.org/kpxl/biodiv/terms/hasStrainID

hasStrainID

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the strain ID"

https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition

hasTaxonConceptDefinition

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"is used as defined in"

https://w3id.org/kpxl/biodiv/terms/hasTaxonName

hasTaxonName

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"has the name - links a taxon usage to a taxon name"

https://w3id.org/kpxl/biodiv/terms/isIdentifiedByNuceotideSequence

isIdentifiedByNuceotideSequence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"identified by nucleotide sequence"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../association

association

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"this association"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../comment

comment

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"short explanation related to the above statement"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../coordinates

coordinates

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"lat/long in format like '+47.37+8.54' or with altitude '+47.37+8.54+410.5'"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../isolationProtocol

isolationProtocol

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"DOI of isolation protocol document"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../lifecyclestage

lifecyclestage

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"select the life cycle stage of the organism; leave blank if unknown"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../location

location

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"GeoNames location ID (https://sws.geonames.org/.../)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../nucleotidesequence

nucleotidesequence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"INSDC/Genbank accession # (e.g. https://www.ncbi.nlm.nih.gov/nuccore/...)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../occurrence

occurrence

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"occurrence URI from GBIF (https://www.gbif.org/occurrence/...) or iDigBio, BOLD, PlutoF, etc."

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organism

organism

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the organism"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../organismAlt

organismAlt

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"any existing URI identifier of organism (e.g. of digital collection specimen or observation in nature)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../relation

relation

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the relation between the organism and the nucleotide sequence"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sampleType

sampleType

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"choose the type of sample"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../strainid

strainid

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"Strain ID string (e.g. DSMZ, ATCC)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxon

taxon

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"the taxon concept"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxondef

taxondef

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxonname

taxonname

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"search and select from list (if not found, paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../timepoint

timepoint

http://www.w3.org/2000/01/rdf-schema#label is labeled as (this is a literal)

"time expressed in XSD DateTime format, e.g. '2023-03-30T22:17:11Z'"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../coordinates

coordinates

https://w3id.org/np/o/ntemplate/hasRegex has regular expression (this is a literal)

"[+-][0-9]+(\.[0-9]+)?[+-][0-9]+(\.[0-9]+)?([+-][0-9]+(\.[0-9]+)?)?"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../isolationProtocol

isolationProtocol

https://w3id.org/np/o/ntemplate/hasRegex has regular expression (this is a literal)

"https://doi\.org/.+"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../location

location

https://w3id.org/np/o/ntemplate/hasRegex has regular expression (this is a literal)

"https://sws\.geonames\.org/[0-9]+/"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../taxondef

taxondef

https://w3id.org/np/o/ntemplate/hasRegex has regular expression (this is a literal)

"(https://doi\.org/|https://treatment\.plazi\.org/id/).+"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../timepoint

timepoint

https://w3id.org/np/o/ntemplate/hasRegex has regular expression (this is a literal)

"-?([1-9]\d\d\d+|0\d\d\d)-(0[1-9]|1[0-2])-(0[1-9]|[12]\d|3[01])T(([01]\d|2[0-3]):[0-5]\d:[0-5]\d(\.\d+)?|24:00:00(\.0+)?)(Z|[+-](0\d|1[0-4]):[0-5]\d)?"

This is the identifier for the assertion of this nanopublication. https://w3id.org/np/RARhEnvsUz.../assertion The assertion above http://www.w3.org/ns/prov#wasAttributedTo is attributed to https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://www.w3.org/ns/prov#wasDerivedFrom was derived from http://purl.org/np/RACPgaoRpt...

RACPgaoRpt

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://purl.org/nanopub/x/supersedes supersedes https://w3id.org/np/RA3HssNGiI...

RA3HssNGiI

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://purl.org/dc/terms/creator is created by https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://purl.org/dc/terms/license is published under the license https://creativecommons.org/licenses/by/4.0/

Attribution 4.0 International (CC BY 4.0)

https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

http://xmlns.com/foaf/0.1/name has the name (this is a literal)

"Tobias Kuhn"

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://www.w3.org/2000/01/rdf-schema#label has the label (this is a literal)

"Expressing an association between an organism and a nucleotide sequence (extended)"

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal)

"2025-11-06T08:43:31.553Z"

(xsd:dateTime) .

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication links to the assertion template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate was created from the assertion template https://w3id.org/np/RA1XuAdO6L...

RA1XuAdO6L

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication links to the provenance template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate was created from the provenance template http://purl.org/np/RANwQa4ICW...

RANwQa4ICW

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication links to the publication info template that was used to create this nanopublication https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate was created from the publication info template https://w3id.org/np/RA0J4vUn_d...

RA0J4vUn_d

RARW4MsFkH

RAoTD7udB2

RAukAcWHRD

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sig

sig

http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... this nanopublication .

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sig

sig

http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal)

"RSA"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sig

sig

http://purl.org/nanopub/x/hasPublicKey has the public key (this is a literal)

"MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB"

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sig

sig

http://purl.org/nanopub/x/hasSignature has the signature (this is a literal)

"5+vjAn968iuAV55WNF9HZmNrNrxkobj/kPpSph2PdmyJGAw0B+vgcOTxEMpoavXz1+r2ioCDffYAqAk8PaysXqsEjG4ukpGnYGaULX11ArA4pfGmj0DnNB04o2wdPZhM87gF/oPIkbo3xRzLvdsERI1h9Dz8B3mSxPYFm2cRKvE="

This is a local identifier minted within the nanopublication. https://w3id.org/np/RARhEnvsUz.../sig

sig

http://purl.org/nanopub/x/signedBy is signed by https://orcid.org/0000-0002-1267-0234

Tobias Kuhn

This is the identifier for this whole nanopublication. https://w3id.org/np/RARhEnvsUz... This nanopublication http://purl.org/nanopub/x/wasCreatedAt was created at https://nanodash.knowledgepixels.com/

nanodash.knowledgepixels.com

Tobias Kuhn, 6 Nov 2025, 08:43:31 UTC

References

Raw

TriG(txt), JSON-LD(txt), N-Quads(txt), XML(txt)