Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions (explore)

Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions

Full identifier: https://w3id.org/np/RA9OPnyNj7BPsCXWkvIrtXZZhlFOuub8lefTWxXkPCFFw

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Nanopublication

Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions BookChapter ScholarlyWork comment approve/disapprove edit as derived nanopublication

http://id.crossref.org/issn/0302-9743

0302-9743

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"Data Integration in the Life Sciences"

https://doi.org/10.1007/11799511_7

doi:10.1007/11799511_7

http://purl.org/dc/terms/abstract

abstract

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"Linking the biomedical literature to other data resources is notoriously difficult and requires text mining. Text mining aims to automatically extract facts from literature. Since authors write in natural language, text mining is a great natural language processing challenge, which is far from being solved. We propose an alternative: If authors and editors summarize the main facts in a controlled natural language, text mining will become easier and more powerful. To demonstrate this approach, we use the language Attempto Controlled English (ACE). We define a simple model to capture the main aspects of protein interactions. To evaluate our approach, we collected a dataset of 459 paragraph headings about protein interaction from literature. 56% of these headings can be represented exactly in ACE and another 23% partially. These results indicate that our approach is feasible."

https://doi.org/10.1007/11799511_7

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"2006"

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"Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions"

https://doi.org/10.1007/11799511_7

doi:10.1007/11799511_7

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Tobias Kuhn

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Tobias Kuhn

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Loic Royer

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Norbert E. Fuchs

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Michael Schroeder

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Michael Schroeder

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Norbert E. Fuchs

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Tobias Kuhn

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Loic Royer

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Michael Schroeder

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Norbert E. Fuchs

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Nanopublication	Part	Subject	Predicate	Object	Published By	Published On
https://w3id.org/np/RA5OYsuycb... RA5OYsuycb	links a nanopublication to its pubinfo http://www.nanopub.org/nschema#hasPublicationInfo pubinfo	https://w3id.org/np/RA5OYsuycb... RA5OYsuycb	http://purl.org/nanopub/x/supersedes supersedes	RA9OPnyNj7	DOI bot	2026-02-22T09:51:40.000Z

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