RAVrvVI8oc (explore)

RAVrvVI8oc

Full identifier: http://purl.org/np/temp/coxbase02/RAVrvVI8ocyhT_kNd261nQtjAfvk4Uzl3meFWALszzW8I

Assigned to 1 class:

http://www.nanopub.org/nschema#Nanopublication Nanopublication ( )

Status

Nanopublication

MLVA genotyping method for Coxiella burnetii DefinedTerm operation_3196 comment approve/disapprove edit as derived nanopublication

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://edamontology.org/has_format

has_format

http://edamontology.org/format_1929

format_1929

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://edamontology.org/has_input

has_input

http://edamontology.org/data_2044

data_2044

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://edamontology.org/has_output

has_output

http://edamontology.org/data_2048

data_2048

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/about

about

http://purl.obolibrary.org/obo/NCBITaxon_777

NCBITaxon_777

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/alternateName

alternateName

(this is a literal)

"MLVA"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/citation

citation

(this is a literal)

"Frangoulidis et al."

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/description

description

(this is a literal)

"High-resolution strain discrimination and comparison method based on tandem repeat analysis of 14 loci for Coxiella burnetii genotyping"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/isPartOf

isPartOf

https://coxbase.q-gaps.de

coxbase.q-gaps.de

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/isPartOf

isPartOf

https://w3id.org/np/RAnh-o0Grv...

RAnh-o0Grv

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/name

name

(this is a literal)

"MLVA - Multiple-Locus Variable-Number Tandem-Repeat Analysis"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://schema.org/potentialAction

potentialAction

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__1

__1

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://semanticscience.org/resource/SIO_000216

SIO_000216

(this is a literal)

"14"

(xsd:integer) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://semanticscience.org/resource/SIO_000229

SIO_000229

(this is a literal)

"high"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://edamontology.org/operation_3196

operation_3196

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://schema.org/DefinedTerm

DefinedTerm

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

http://www.w3.org/2000/01/rdf-schema#comment

comment

(this is a literal)

"Calculation formula: RN = (AL - FL) / RS where RN=repeat number, AL=amplicon length, FL=flanking length, RS=repeat size"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__1

__1

http://schema.org/instrument

instrument

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__2

__2

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__1

__1

http://schema.org/name

name

(this is a literal)

"e-PCR amplicon detection"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__1

__1

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://schema.org/Action

Action

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__2

__2

http://schema.org/description

description

(this is a literal)

"Tool for in silico extraction of MLVA amplicon lengths"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__2

__2

http://schema.org/name

name

(this is a literal)

"e-PCR tool"

(en) .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../__2

__2

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://schema.org/SoftwareApplication

SoftwareApplication

This is the identifier for the assertion of this nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../assertion The assertion above http://www.w3.org/ns/prov#generatedAtTime

generatedAtTime

(this is a literal)

"2026-01-10T23:00:00Z"

(xsd:dateTime) .

This is the identifier for the assertion of this nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../assertion The assertion above http://www.w3.org/ns/prov#wasAttributedTo

wasAttributedTo

https://orcid.org/0000-0002-1481-2996

0000-0002-1481-2996

This is the identifier for the assertion of this nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../assertion The assertion above http://www.w3.org/ns/prov#wasDerivedFrom

wasDerivedFrom

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

http://purl.org/ontology/bibo/doi

doi

(this is a literal)

"10.1128/mSystems.00403-21"

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

http://schema.org/datePublished

datePublished

(this is a literal)

"2021"

(xsd:gYear) .

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

http://schema.org/name

name

(this is a literal)

"CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences"

(en) .

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://purl.org/ontology/bibo/AcademicArticle

AcademicArticle

https://doi.org/10.1128/mSystems.00403-21

doi:10.1128/mSystems.00403-21

http://www.w3.org/1999/02/22-rdf-syntax-ns#type

type

http://schema.org/ScholarlyArticle

ScholarlyArticle

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc... This nanopublication http://www.w3.org/2000/01/rdf-schema#label has the label (this is a literal)

"MLVA genotyping method for Coxiella burnetii"

(en) .

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc... This nanopublication date and time when the nanopublication was created http://purl.org/dc/terms/created was created on (this is a literal)

"2026-01-10T23:00:00Z"

(xsd:dateTime) .

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc... This nanopublication the nanopublication consists of an introduction of the given resource http://purl.org/nanopub/x/introduces introduces This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../MLVAMethod

MLVAMethod

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../sig

sig

http://purl.org/nanopub/x/hasSignatureTarget has as target This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc... this nanopublication .

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../sig

sig

http://purl.org/nanopub/x/hasAlgorithm has the algorithm (this is a literal)

"RSA"

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../sig

sig

http://purl.org/nanopub/x/hasPublicKey has the public key (this is a literal)

"MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB"

This is a local identifier minted within the nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc.../sig

sig

http://purl.org/nanopub/x/hasSignature has the signature (this is a literal)

"dOUgqdG6dih+cY+DUCWOXcTq2uvzL24Vj0wT/CaJc1Pnvh3vpQeLC3maal3OILXGMjJuO7t23utwtrvONzWA86gTznor89prQU5/n2L6n32zH62xDF4cGc0he8hiZedJbQ1klb1VZexbxcuLHwqm9ZtzcFEH4L9M66f9YsoxC1RQ+gB7UT3OUaXjx3aICikPiHpZBAM8E1GdMvUUkleckcVFgz62+KFyfMYtxX3f2+Gr++QPIVdWbj6p69lgXJmzk6u0B0jfH1r15V1Ym+ej1gNNGsoiZc8yOk60eG13X0nAlM4o+b30R3dOf93x0VdcVw2TPzdY1/fxqoMoqYtPuw=="

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc...

this nanopublication

http://purl.org/dc/terms/creator

creator

https://orcid.org/0009-0005-7752-8203

Tiado Kollender

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc...

this nanopublication

http://purl.org/dc/terms/license

license

https://creativecommons.org/publicdomain/zero/1.0/

1.0

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc...

this nanopublication

http://purl.org/pav/authoredBy

authoredBy

https://orcid.org/0009-0005-7752-8203

Tiado Kollender

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc...

this nanopublication

http://www.w3.org/2000/01/rdf-schema#comment

comment

(this is a literal)

"This nanopublication describes the MLVA (Multiple-Locus Variable-Number Tandem-Repeat Analysis) genotyping method as implemented in CoxBase for high-resolution strain discrimination of Coxiella burnetii based on 14 tandem repeat loci"

(en) .

This is the identifier for this whole nanopublication. http://purl.org/np/temp/coxbase02/RAVrvVI8oc...

this nanopublication

http://www.w3.org/ns/prov#wasAttributedTo

wasAttributedTo

https://orcid.org/0009-0005-7752-8203

Tiado Kollender

Tiado Kollender (author), 0009-0005-7752-8203 (creator), 10 Jan 2026, 23:00:00 UTC

References

Nanopublication	Part	Subject	Predicate	Object	Published By	Published On
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Raw

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