Environmental research
https://doi.org/10.5281/zenodo.17171136
2025-09-22 10:48:24.562016+00:00
2025-09-22 10:48:25.226799+00:00
Contains outputs, (results), generated in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Outputs
2025-09-22 10:48:24.562016+00:00
https://doi.org/10.5281/zenodo.17175792
2025-09-22 10:48:22.888533+00:00
2025-09-22 10:48:23.594034+00:00
Contains input Input datasets used in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Input Input datasets
2025-09-22 10:48:22.888533+00:00
https://github.com/eds-book/dea59792-5a6d-4633-a74c-eb73edce61b8/blob/main/notebook.ipynb
2025-09-22 10:48:20.987054+00:00
2025-09-22 10:48:21.788847+00:00
Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
2025-09-22 10:48:20.987054+00:00
Rio de Janeiro State University
rpedruzzi@eng.uerj.br
Rizzieri Pedruzzi
0000-0003-0852-0396
Hangzhou Dianzi University
Zehao Liu
0009-0000-3855-6352
Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
0
https://api.rohub.org/api/ros/d14c540e-0a98-4c7f-a028-d535535369ac/crate/download/
2025-09-22 10:47:58.115149+00:00
2025-10-16 11:11:37.969501+00:00
2025-09-22 10:47:58.115149+00:00
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/d14c540e-0a98-4c7f-a028-d535535369ac
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Lucky J. Yang, Rizzieri Pedruzzi, and Zehao Liu. "Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Sep 22 ,2025. https://w3id.org/ro-id/d14c540e-0a98-4c7f-a028-d535535369ac.
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biblio
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2025-09-22 10:48:19.978707+00:00
image/png
Image showing an example of the vehicle-based observation emissions data
2025-09-22 10:48:18.468040+00:00
simulation
12.0
9.9
Environmental Data Science book
12.727272727272727
11.9
experiment
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mathematical and computer sciences
100.0
0.24472567439079285
earth sciences
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atmospheric sciences
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Economy, business and finance/Economic sector/Media/Book industry
aim
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computer operations and hardware
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Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book.
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46.0
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
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Environmental Data Science Book Community
Westlake University
yangjianqi@westlake.edu.cn
Lucky J. Yang
Environmental research
https://doi.org/10.5281/zenodo.17171136
2025-09-22 10:49:18.454535+00:00
2025-09-22 10:49:19.122602+00:00
Contains outputs, (results), generated in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Outputs
2025-09-22 10:49:18.454535+00:00
https://doi.org/10.5281/zenodo.17175792
2025-09-22 10:49:16.843742+00:00
2025-09-22 10:49:17.507885+00:00
Contains input Input datasets used in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Input Input datasets
2025-09-22 10:49:16.843742+00:00
https://github.com/eds-book/dea59792-5a6d-4633-a74c-eb73edce61b8/blob/main/notebook.ipynb
2025-09-22 10:49:14.547747+00:00
2025-09-22 10:49:15.345765+00:00
Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
2025-09-22 10:49:14.547747+00:00
Rio de Janeiro State University
rpedruzzi@eng.uerj.br
Rizzieri Pedruzzi
0000-0003-0852-0396
Hangzhou Dianzi University
Zehao Liu
0009-0000-3855-6352
0
https://api.rohub.org/api/ros/0b449ecb-dc8f-4ba0-9211-8bb9864ce7e2/crate/download/
2025-09-22 10:48:52.986447+00:00
2025-10-16 11:11:19.223037+00:00
2025-09-22 10:48:52.986447+00:00
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/0b449ecb-dc8f-4ba0-9211-8bb9864ce7e2
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Lucky J. Yang, Rizzieri Pedruzzi, and Zehao Liu. "Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Sep 22 ,2025. https://w3id.org/ro-id/0b449ecb-dc8f-4ba0-9211-8bb9864ce7e2.
output
biblio
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tool
100693
https://api.rohub.org/api/resources/41e32a87-e2e9-44a8-9317-e1a03e8423bc/download/
2025-09-22 10:49:12.096244+00:00
2025-09-22 10:49:13.527385+00:00
image/png
Image showing an example of the vehicle-based observation emissions data
2025-09-22 10:49:12.096244+00:00
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
53.95395395395395
53.9
aim
7.2727272727272725
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Environmental Data Science book
12.727272727272727
11.9
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book.
46.046046046046044
46.0
research
9.454545454545455
7.8
Book industry
Economy, business and finance/Economic sector/Media/Book industry
simulation
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9.9
notebook
11.516533637400228
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28.96969696969697
23.9
mathematical and computer sciences
100.0
0.24472567439079285
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100.0
0.7707348465919495
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100.0
0.24472567439079285
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Arts, culture and entertainment/Culture/Language
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9.007981755986316
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publishing
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simulation experiment
29.3048128342246
27.4
observation data processing
33.04812834224599
30.9
experiment
18.78787878787879
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Environmental Data Science
12.542759407069555
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research object
22.352941176470587
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notebook
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simulation experiments notebook
2.5668449197860963
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simulation
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atmospheric sciences
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Environmental Data Science Book Community
Westlake University
yangjianqi@westlake.edu.cn
Lucky J. Yang
Environmental research
https://doi.org/10.5281/zenodo.17171136
2025-09-22 10:50:40.131872+00:00
2025-09-22 10:50:40.766967+00:00
Contains outputs, (results), generated in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Outputs
2025-09-22 10:50:40.131872+00:00
https://doi.org/10.5281/zenodo.17175792
2025-09-22 10:50:38.422172+00:00
2025-09-22 10:50:39.116427+00:00
Contains input Input datasets used in the Jupyter notebook of Vehicle-based observation data processing and simple simulation experiments
Input Input datasets
2025-09-22 10:50:38.422172+00:00
https://github.com/eds-book/dea59792-5a6d-4633-a74c-eb73edce61b8/blob/main/notebook.ipynb
2025-09-22 10:50:36.343361+00:00
2025-09-22 10:50:37.222607+00:00
Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
2025-09-22 10:50:36.343361+00:00
Rio de Janeiro State University
rpedruzzi@eng.uerj.br
Rizzieri Pedruzzi
0000-0003-0852-0396
Hangzhou Dianzi University
Zehao Liu
0009-0000-3855-6352
0
https://api.rohub.org/api/ros/368f9594-6513-4f49-a510-275c07b1c3b6/crate/download/
2025-09-22 10:50:14.653665+00:00
2025-10-16 11:11:03.381864+00:00
2025-09-22 10:50:14.653665+00:00
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/368f9594-6513-4f49-a510-275c07b1c3b6
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Lucky J. Yang, Rizzieri Pedruzzi, and Zehao Liu. "Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Sep 22 ,2025. https://w3id.org/ro-id/368f9594-6513-4f49-a510-275c07b1c3b6.
output
tool
input
biblio
100693
https://api.rohub.org/api/resources/59322158-c890-4018-9316-71e09c41c47f/download/
2025-09-22 10:50:34.313127+00:00
2025-09-22 10:50:35.343626+00:00
image/png
Image showing an example of the vehicle-based observation emissions data
2025-09-22 10:50:34.313127+00:00
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
Language
Arts, culture and entertainment/Culture/Language
publishing
100.0
4.4
simulation
10.946408209806156
9.6
data processing
28.164196123147093
24.7
experiment
17.44583808437856
15.3
aim
7.2727272727272725
6.0
experiment
18.78787878787879
15.5
observation data processing
33.04812834224599
30.9
research object
22.352941176470587
20.9
research
9.007981755986316
7.9
research
9.454545454545455
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notebook
11.516533637400228
10.1
simulation experiments notebook
2.5668449197860963
2.4
Environmental Data Science book
12.727272727272727
11.9
atmospheric sciences
100.0
0.7707348465919495
Environmental Data Science
12.542759407069555
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mathematical and computer sciences
100.0
0.24472567439079285
data processing
28.96969696969697
23.9
Vehicle-based observation data processing and simple simulation experiments (Jupyter Notebook) published in the Environmental Data Science book.
46.046046046046044
46.0
simulation experiment
29.3048128342246
27.4
earth sciences
100.0
0.7707348465919495
computer operations and hardware
100.0
0.24472567439079285
book
11.515151515151516
9.5
The research object refers to the Vehicle-based observation data processing and simple simulation experiments notebook published in the Environmental Data Science book.
53.95395395395395
53.9
book
10.376282782212087
9.1
notebook
12.0
9.9
simulation
12.0
9.9
Book industry
Economy, business and finance/Economic sector/Media/Book industry
Environmental Data Science Book Community
Westlake University
yangjianqi@westlake.edu.cn
Lucky J. Yang
Environmental research
Anne Fouilloux
https://raw.githubusercontent.com/FAIR2Adapt/saarland-flooding/refs/heads/main/notebooks/Flood_protection_line_Saarland.ipynb
2025-10-08 08:47:29.592762+00:00
2025-10-08 08:47:30.239969+00:00
Visualizing Generalized Flood Areas for HQ100 Event and relate to an existing flooding event.
Flood analysis with JupterGIS
2025-10-08 08:47:29.592762+00:00
https://raw.githubusercontent.com/FAIR2Adapt/saarland-flooding/refs/heads/main/static/flood_in_saarland_with_jqgis.png
2025-10-08 08:46:18.994606+00:00
2025-10-08 08:46:19.636455+00:00
Example for FAIR2Adapt training on RO-Crate and ROHub
image/png
flood in saarland with JupyterGIS
2025-10-08 08:46:18.994606+00:00
0527eb4e-b7c8-4ac0-9b85-52e0773c3b79
POLYGON ((6.31 49.1, 6.31 49.64, 7.41 49.64, 7.41 49.1, 6.31 49.1))
POLYGON ((6.31 49.1, 6.31 49.64, 7.41 49.64, 7.41 49.1, 6.31 49.1))
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https://api.rohub.org/api/ros/8a351029-86a8-4e90-a9d1-a67d45d63656/crate/download/
2025-10-08 08:39:21.885634+00:00
2025-10-16 11:10:21.642786+00:00
2025-10-08 08:39:21.885634+00:00
This Research Object is an example for FAIR2Adapt Case Study 2
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https://w3id.org/ro-id/8a351029-86a8-4e90-a9d1-a67d45d63656
FAIR2Adapt RO-Crate with Jupyter Notebook
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "FAIR2Adapt RO-Crate with Jupyter Notebook." ROHub. Oct 08 ,2025. https://w3id.org/ro-id/8a351029-86a8-4e90-a9d1-a67d45d63656.
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https://api.rohub.org/api/resources/4d1eee3a-9631-4d76-a15a-ab1de329fde1/download/
2025-10-08 08:44:48.739835+00:00
2025-10-08 08:44:50.121842+00:00
image/png
Image to illustrate my case study
2025-10-08 08:44:48.739835+00:00
earth sciences
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geosciences
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FAIR2Adapt RO-Crate with Jupyter Notebook.
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Ro-crate with Jupyter Notebook
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20.67988668555241
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Food and drink
Lifestyle and leisure/Lifestyle/Food and drink
Language
Arts, culture and entertainment/Culture/Language
Food
Economy, business and finance/Economic sector/Consumer goods/Food
Environmental research
0
https://api.rohub.org/api/ros/bc6f13f4-e7d6-4490-ae63-3dff3939f914/crate/download/
2025-12-07 19:52:04.926440+00:00
2026-04-11 09:47:42.427406+00:00
2025-12-07 19:52:04.926440+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/bc6f13f4-e7d6-4490-ae63-3dff3939f914
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/bc6f13f4-e7d6-4490-ae63-3dff3939f914.
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biblio
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Climate change impacts, risks and adaptation
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Weather/Weather phenomena
Climate-ADAPT Adaptation Sectors
data pipelining tool
36.442786069651746
29.3
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water datum
5.72139303482587
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fact
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Book industry
Economy, business and finance/Economic sector/Media/Book industry
European Continent
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Arts, culture and entertainment/Culture/Language
book
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Storms
Key Type Measures
User Needs (RAST)
data visualization
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Funding
tool in r
26.74129353233831
21.5
datum
22.0795892169448
17.2
Methodology
Geosciences
pipeline processing
11.926605504587156
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research
9.82961992136304
7.5
IPCC
Climate Hazard
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22.63681592039801
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Geosciences (General)
Academic/ Institutional
Environmental Data Science
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Environmental Data Science book
8.45771144278607
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none
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
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Literature
Arts, culture and entertainment/Arts and entertainment/Literature
Environmental Science and Management
Weather
Weather
research
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pipelining
12.708600770218228
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aim
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Physical and Technological
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notebook
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Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Environmental research
data visualization
16.43132220795892
12.8
water datum
5.72139303482587
4.6
computer science
100.0
15.9
Policy Scale
IPCC
Weather
Weather
Environmental Science and Management
Climate-ADAPT Adaptation Sectors
research
10.141206675224646
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aim
6.553079947575361
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notebook
7.732634338138926
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Environmental Sciences
European Continent
tool in r
26.74129353233831
21.5
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
Water management
Climate change impacts, risks and adaptation
data pipelining tool
36.442786069651746
29.3
tool
18.485237483953785
14.4
Environmental Data Science book
8.45771144278607
6.8
research object
22.63681592039801
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Physical and Technological
Environmental Data Science
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Institutional: Government policies and programs
tool
17.95543905635649
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book
7.601572739187418
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research
9.82961992136304
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Methodology
Geosciences (General)
none
Book industry
Economy, business and finance/Economic sector/Media/Book industry
No policy or regulation
Funding
Storms
Geographical Scope
Language
Arts, culture and entertainment/Culture/Language
Engineering (General)
Weather phenomena
Weather/Weather phenomena
Knowledge Sector (EEA)
Geosciences
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
Engineering
Academia/ Research Institutions
fact
21.62516382699869
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Stakeholders
Academic/ Institutional
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https://api.rohub.org/api/ros/f4cfe8f4-abcc-41b0-9c8d-8a01bed66730/crate/download/
2025-12-07 19:52:30.693118+00:00
2026-04-11 09:48:02.572671+00:00
2025-12-07 19:52:30.693118+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/f4cfe8f4-abcc-41b0-9c8d-8a01bed66730
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Community, Environmental Data Science Book. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/f4cfe8f4-abcc-41b0-9c8d-8a01bed66730.
input
output
biblio
tool
Environmental Data Science Book Community
Environmental research
0
https://api.rohub.org/api/ros/3a33645c-7d45-452b-a53d-0133d12e991f/crate/download/
2025-12-07 19:54:27.990497+00:00
2026-04-11 09:47:22.278061+00:00
2025-12-07 19:54:27.990497+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/3a33645c-7d45-452b-a53d-0133d12e991f
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/3a33645c-7d45-452b-a53d-0133d12e991f.
output
biblio
input
tool
data
16.775884665792923
12.8
Preparing the ground
Academia/ Research Institutions
research object
22.63681592039801
18.2
Methodology
Physical and Technological
IPCC
Geographical Scope
Water management
Institutional: Government policies and programs
Climate change impacts, risks and adaptation
data visualization
16.43132220795892
12.8
Weather phenomena
Weather/Weather phenomena
book
7.601572739187418
5.8
pipeline processing
11.926605504587156
9.1
Storms
Weather
Weather
Book industry
Economy, business and finance/Economic sector/Media/Book industry
fact
21.62516382699869
16.5
aim
6.553079947575361
5.0
Environmental Data Science
9.242618741976893
7.2
Geosciences
Academic/ Institutional
Engineering (General)
Engineering
research
10.141206675224646
7.9
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
Knowledge Sector (EEA)
Language
Arts, culture and entertainment/Culture/Language
notebook
7.732634338138926
5.9
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
data pipelining tool
36.442786069651746
29.3
water datum
5.72139303482587
4.6
tool
17.95543905635649
13.7
Policy Scale
Environmental Data Science book
8.45771144278607
6.8
User Needs (RAST)
European Continent
Climate Hazard
computer science
100.0
15.9
No policy or regulation
tool in r
26.74129353233831
21.5
pipelining
12.708600770218228
9.9
tool
18.485237483953785
14.4
Climate-ADAPT Adaptation Sectors
research
9.82961992136304
7.5
Environmental Sciences
data
10.91142490372272
8.5
Environmental Science and Management
Geosciences (General)
Stakeholders
datum
22.0795892169448
17.2
Key Type Measures
none
Funding
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Environmental research
0
https://api.rohub.org/api/ros/acefb4d3-e320-4df8-a8b1-17cfa1a40ea0/crate/download/
2025-12-07 19:54:45.553533+00:00
2026-04-11 09:47:32.519324+00:00
2025-12-07 19:54:45.553533+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/acefb4d3-e320-4df8-a8b1-17cfa1a40ea0
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/acefb4d3-e320-4df8-a8b1-17cfa1a40ea0.
tool
output
input
biblio
none
Academia/ Research Institutions
Physical and Technological
Weather phenomena
Weather/Weather phenomena
research object
22.63681592039801
18.2
Geosciences (General)
Environmental Sciences
IPCC
Institutional: Government policies and programs
Climate change impacts, risks and adaptation
Methodology
data
10.91142490372272
8.5
Engineering (General)
research
9.82961992136304
7.5
Climate-ADAPT Adaptation Sectors
Knowledge Sector (EEA)
No policy or regulation
computer science
100.0
15.9
data visualization
16.43132220795892
12.8
Environmental Science and Management
Preparing the ground
aim
6.553079947575361
5.0
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
fact
21.62516382699869
16.5
tool
18.485237483953785
14.4
Geographical Scope
water datum
5.72139303482587
4.6
data
16.775884665792923
12.8
pipeline processing
11.926605504587156
9.1
Funding
Key Type Measures
Environmental Data Science
9.242618741976893
7.2
book
7.601572739187418
5.8
Weather
Weather
Book industry
Economy, business and finance/Economic sector/Media/Book industry
Engineering
Storms
tool in r
26.74129353233831
21.5
Environmental Data Science book
8.45771144278607
6.8
notebook
7.732634338138926
5.9
Language
Arts, culture and entertainment/Culture/Language
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
User Needs (RAST)
Stakeholders
pipelining
12.708600770218228
9.9
Water management
data pipelining tool
36.442786069651746
29.3
tool
17.95543905635649
13.7
European Continent
research
10.141206675224646
7.9
datum
22.0795892169448
17.2
Policy Scale
Academic/ Institutional
Geosciences
Climate Hazard
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Environmental research
0
https://api.rohub.org/api/ros/70040ead-8d3e-4e1d-ab67-2472d302dabd/crate/download/
2025-12-07 19:55:20.674161+00:00
2026-04-11 09:47:52.885307+00:00
2025-12-07 19:55:20.674161+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/70040ead-8d3e-4e1d-ab67-2472d302dabd
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/70040ead-8d3e-4e1d-ab67-2472d302dabd.
input
output
tool
biblio
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
Geographical Scope
research
10.141206675224646
7.9
Geosciences
aim
6.553079947575361
5.0
fact
21.62516382699869
16.5
data pipelining tool
36.442786069651746
29.3
IPCC
none
Storms
Climate change impacts, risks and adaptation
tool
17.95543905635649
13.7
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
pipeline processing
11.926605504587156
9.1
Preparing the ground
data
10.91142490372272
8.5
Book industry
Economy, business and finance/Economic sector/Media/Book industry
Methodology
Climate Hazard
Weather
Weather
datum
22.0795892169448
17.2
Climate-ADAPT Adaptation Sectors
Geosciences (General)
data
16.775884665792923
12.8
tool
18.485237483953785
14.4
No policy or regulation
research object
22.63681592039801
18.2
Weather phenomena
Weather/Weather phenomena
Funding
tool in r
26.74129353233831
21.5
Language
Arts, culture and entertainment/Culture/Language
water datum
5.72139303482587
4.6
Key Type Measures
Environmental Data Science
9.242618741976893
7.2
Stakeholders
Environmental Sciences
Engineering (General)
computer science
100.0
15.9
Policy Scale
Academic/ Institutional
Academia/ Research Institutions
European Continent
data visualization
16.43132220795892
12.8
Water management
Environmental Data Science book
8.45771144278607
6.8
Environmental Science and Management
User Needs (RAST)
Knowledge Sector (EEA)
Physical and Technological
Institutional: Government policies and programs
pipelining
12.708600770218228
9.9
book
7.601572739187418
5.8
Engineering
notebook
7.732634338138926
5.9
research
9.82961992136304
7.5
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Environmental research
0
https://api.rohub.org/api/ros/18c1e606-b72e-4971-964a-af90a0503f41/crate/download/
2025-12-07 19:55:29.829541+00:00
2026-04-11 09:48:22.768026+00:00
2025-12-07 19:55:29.829541+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/18c1e606-b72e-4971-964a-af90a0503f41
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/18c1e606-b72e-4971-964a-af90a0503f41.
biblio
output
tool
input
Policy Scale
water datum
5.72139303482587
4.6
Water management
Environmental Science and Management
Environmental Data Science book
8.45771144278607
6.8
Stakeholders
Climate change impacts, risks and adaptation
Physical and Technological
Key Type Measures
book
7.601572739187418
5.8
Institutional: Government policies and programs
Geosciences (General)
Environmental Sciences
Storms
tool
18.485237483953785
14.4
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
computer science
100.0
15.9
Academia/ Research Institutions
aim
6.553079947575361
5.0
User Needs (RAST)
Geosciences
pipelining
12.708600770218228
9.9
Weather phenomena
Weather/Weather phenomena
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
No policy or regulation
Climate-ADAPT Adaptation Sectors
none
Geographical Scope
datum
22.0795892169448
17.2
Funding
fact
21.62516382699869
16.5
Language
Arts, culture and entertainment/Culture/Language
pipeline processing
11.926605504587156
9.1
Knowledge Sector (EEA)
IPCC
European Continent
Methodology
Engineering (General)
research
10.141206675224646
7.9
research object
22.63681592039801
18.2
Academic/ Institutional
notebook
7.732634338138926
5.9
Environmental Data Science
9.242618741976893
7.2
Weather
Weather
data pipelining tool
36.442786069651746
29.3
Engineering
data
10.91142490372272
8.5
Preparing the ground
tool in r
26.74129353233831
21.5
tool
17.95543905635649
13.7
Book industry
Economy, business and finance/Economic sector/Media/Book industry
data
16.775884665792923
12.8
Climate Hazard
data visualization
16.43132220795892
12.8
research
9.82961992136304
7.5
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Environmental research
Stakeholders
Climate Hazard
book
7.601572739187418
5.8
User Needs (RAST)
tool
18.485237483953785
14.4
Engineering
IPCC
Environmental Data Science
9.242618741976893
7.2
Environmental Data Science book
8.45771144278607
6.8
research
10.141206675224646
7.9
Weather
Weather
pipeline processing
11.926605504587156
9.1
European Continent
computer science
100.0
15.9
Water management
research object
22.63681592039801
18.2
aim
6.553079947575361
5.0
Policy Scale
none
research
9.82961992136304
7.5
Language
Arts, culture and entertainment/Culture/Language
notebook
7.732634338138926
5.9
Climate change impacts, risks and adaptation
data
10.91142490372272
8.5
Literature
Arts, culture and entertainment/Arts and entertainment/Literature
Storms
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
100.0
100.0
Book industry
Economy, business and finance/Economic sector/Media/Book industry
Academic/ Institutional
Physical and Technological
Institutional: Government policies and programs
Climate-ADAPT Adaptation Sectors
Preparing the ground
Geosciences
No policy or regulation
water datum
5.72139303482587
4.6
fact
21.62516382699869
16.5
Geosciences (General)
Environmental Science and Management
Key Type Measures
data
16.775884665792923
12.8
Geographical Scope
tool in r
26.74129353233831
21.5
Weather phenomena
Weather/Weather phenomena
Engineering (General)
Knowledge Sector (EEA)
pipelining
12.708600770218228
9.9
Academia/ Research Institutions
Environmental Sciences
data visualization
16.43132220795892
12.8
datum
22.0795892169448
17.2
Methodology
data pipelining tool
36.442786069651746
29.3
tool
17.95543905635649
13.7
Funding
0
https://api.rohub.org/api/ros/fa165103-2ad7-426e-baf0-b8f52a130720/crate/download/
2025-12-07 19:55:45.229974+00:00
2026-04-11 09:48:12.622500+00:00
2025-12-07 19:55:45.229974+00:00
The research object refers to the Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data notebook published in the Environmental Data Science book.
application/ld+json
https://w3id.org/ro-id/fa165103-2ad7-426e-baf0-b8f52a130720
Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Abner Bogan, and Lindsay Platt. "Using a robust data pipelining tool in R to build a reproducible hurricane data visualization with multi-agency water data (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Dec 07 ,2025. https://w3id.org/ro-id/fa165103-2ad7-426e-baf0-b8f52a130720.
input
biblio
output
tool
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
abogan@cuahsi.org
Abner Bogan
Environmental Data Science Book Community
Consortium of Universities for the Advancement of Hydrologic Science, Inc.
lplatt@cuahsi.org
Lindsay Platt
Earth observation
https://github.com/EOPF-Sample-Service/eopf-sample-notebooks
2025-12-21 14:59:18.341013+00:00
2025-12-21 14:59:18.963543+00:00
ESA Earth Observation Processing Framework for Sentinel-1, 2 and 3 data access
EOPF Sample Service
2025-12-21 14:59:18.341013+00:00
https://github.com/geojupyter/jupytergis
2025-12-21 14:59:14.270649+00:00
2025-12-21 14:59:14.934927+00:00
Collaborative GIS environment for Jupyter - required to open .jGIS files
JupyterGIS
2025-12-21 14:59:14.270649+00:00
Anne Fouilloux
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/../requirements.txt
2025-12-21 14:59:16.320382+00:00
2025-12-21 14:59:16.930237+00:00
Conda environment specification with all Python dependencies
text/plain
Conda Environment
2025-12-21 14:59:16.320382+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/Wetland_ML_Demo_EOPF.ipynb
2025-12-21 14:59:20.404796+00:00
2025-12-21 14:59:21.070859+00:00
Main Jupyter notebook implementing the wetland classification workflow
Wetland ML Demo Notebook
2025-12-21 14:59:20.404796+00:00
0
https://api.rohub.org/api/ros/972ba092-9239-4947-9bf6-495c53e57266/crate/download/
2025-12-21 14:59:12.328362+00:00
2026-04-11 03:22:47.701619+00:00
2025-12-21 14:59:12.328362+00:00
Human-in-the-loop machine learning workflow for wetland classification
using Sentinel-2 data from ESA EOPF. Demonstrates collaborative annotation
using JupyterGIS, model retraining with expert corrections, and FAIR
research practices.
application/ld+json
https://w3id.org/ro-id/972ba092-9239-4947-9bf6-495c53e57266
JupyterGIS Wetland Classification Demo - ESA EOPF
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "JupyterGIS Wetland Classification Demo - ESA EOPF." ROHub. Dec 21 ,2025. https://w3id.org/ro-id/972ba092-9239-4947-9bf6-495c53e57266.
output
tool
biblio
input
Geographical Scope
annotation
13.086770981507822
9.2
Knowledge Sector (EEA)
Physical and Technological
Demonstrates collaborative annotation
using JupyterGIS, model retraining with expert corrections, and FAIR
research practices.
30.93093093093093
30.9
Academic/ Institutional
Preparing the ground
Aerospace Engineering
Climate Hazard
Mathematical and computer sciences (general)
classification
12.091038406827881
8.5
Policy Scale
JupyterGIS Wetland Classification Demo
IT-computer sciences
Science and technology/Technology and engineering/IT-computer sciences
Methodology
Academia/ Research Institutions
User Needs (RAST)
machine learning workflow
29.345372460496613
26.0
Geosciences
correction
9.174311926605505
6.0
Geosciences (General)
Funding
collaborative annotation
13.31828442437923
11.8
Key Type Measures
Mathematical and computer sciences
practice
7.339449541284403
4.8
Wetlands
Environment/Natural resources/Water/Wetlands
Retraining
Labour/Employment/Employment training/Retraining
JupyterGIS Wetland Classification Demo - ESA EOPF Human-in-the-loop machine learning workflow for wetland classification
using Sentinel-2 data from ESA EOPF.
69.06906906906906
69.0
computer science
100.0
11.7
European Continent
Education
Education
Computer programming and software
data
15.443425076452598
10.1
Other Technology
Case Study
Engineering
Sentinel-2
13.371266002844951
9.4
Climate-ADAPT Adaptation Sectors
Data Format
Land use planning
Engineering (General)
Teaching and learning
Education/Teaching and learning
Esa Eopf
15.07823613086771
10.6
Earth resources and remote sensing
Distributed Computing
none
workflow
11.009174311926605
7.2
IPCC
Esa Eopf
wetland
7.339449541284403
4.8
wetland classification
29.006772009029344
25.7
research
7.798165137614677
5.1
Stakeholders
note
13.608562691131498
8.9
Other Engineering
Other Information and Computing Sciences
No policy or regulation
Information Systems
Interdisciplinary Engineering
Biodiversity: state of habitats and species
category
13.30275229357798
8.7
Computer Software
Engineering
JupyterGIS Wetland Classification Demo
17.780938833570413
12.5
machine learning
14.22475106685633
10.0
Information and Computing Sciences
research practice
20.428893905191874
18.1
data from Esa eopf
7.900677200902933
7.0
machine learning
14.984709480122325
9.8
Technology
data
14.366998577524894
10.1
Computer systems
none
Earth observation
https://annefou.github.io/jupytergis-showcases/lab/index.html?path=Wetland_Annotation.jGIS
2025-12-21 16:29:01.808092+00:00
2025-12-21 16:29:02.435279+00:00
Interactive map with expert annotations for model corrections
text/html
JupyterGIS Annotation Document
2025-12-21 16:29:01.808092+00:00
https://github.com/EOPF-Sample-Service/eopf-sample-notebooks
2025-12-21 16:28:57.399750+00:00
2025-12-21 16:28:58.038982+00:00
ESA Earth Observation Processing Framework for Sentinel-1, 2 and 3 data access
EOPF Sample Service
2025-12-21 16:28:57.399750+00:00
https://github.com/annefou/jupytergis-showcases
2025-12-21 16:29:33.240998+00:00
2025-12-21 16:29:33.849049+00:00
Source repository for this demo
GitHub Repository
2025-12-21 16:29:33.240998+00:00
https://github.com/geojupyter/jupytergis
2025-12-21 16:28:53.494405+00:00
2025-12-21 16:28:54.119033+00:00
Collaborative GIS environment for Jupyter - required to open .jGIS files
JupyterGIS
2025-12-21 16:28:53.494405+00:00
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/../requirements.txt
2025-12-21 16:28:55.442396+00:00
2025-12-21 16:28:56.067960+00:00
Conda environment specification with all Python dependencies
text/plain
Conda Environment
2025-12-21 16:28:55.442396+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/Wetland_ML_Demo_EOPF.ipynb
2025-12-21 16:28:59.461288+00:00
2025-12-21 16:29:00.096604+00:00
Main Jupyter notebook implementing the wetland classification workflow
Wetland ML Demo Notebook
2025-12-21 16:28:59.461288+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/Wetland_ML_ROhub.ipynb
2025-12-21 16:41:18.541514+00:00
2025-12-21 16:41:19.390117+00:00
Jupyter notebook to create a RO-Crate in ROHub
Wetland_ML_ROhub
2025-12-21 16:41:18.541514+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/wetland_outputs/corrections.geojson
2025-12-21 16:29:08.929182+00:00
2025-12-21 16:29:13.322705+00:00
Expert corrections extracted from JupyterGIS annotations
Expert Corrections (GeoJSON)
2025-12-21 16:29:08.929182+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/wetland_outputs/sentinel2_rgb.tif
2025-12-21 16:29:04.078500+00:00
2025-12-21 16:54:53.937124+00:00
Cloud Optimized GeoTIFF - RGB composite from Sentinel-2 L2A
image/tiff
Sentinel-2 RGB Composite (COG)
2025-12-21 16:29:04.078500+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/wetland_outputs/wetland_model_v2.joblib
2025-12-21 16:29:27.413086+00:00
2025-12-21 16:29:31.950449+00:00
Serialized Random Forest model retrained with expert corrections
Trained Model v2 (joblib)
2025-12-21 16:29:27.413086+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/wetland_outputs/wetland_prediction_v1.tif
2025-12-21 16:29:06.069310+00:00
2025-12-21 16:29:06.645893+00:00
Initial Random Forest classification - before expert corrections
image/tiff
Wetland Prediction v1
2025-12-21 16:29:06.069310+00:00
https://raw.githubusercontent.com/annefou/jupytergis-showcases/refs/heads/main/content/wetland_outputs/wetland_prediction_v2_corrected.tif
2025-12-21 16:29:16.556974+00:00
2025-12-21 16:29:23.003791+00:00
Improved classification after retraining with expert corrections
image/tiff
Wetland Prediction v2 (Corrected)
2025-12-21 16:29:16.556974+00:00
0
https://api.rohub.org/api/ros/10dc322d-eedd-43ff-a4af-7adb6281cb6e/crate/download/
2025-12-21 16:28:47.782517+00:00
2026-04-11 03:23:09.225173+00:00
2025-12-21 16:28:47.782517+00:00
Human-in-the-loop machine learning workflow for wetland classification
using Sentinel-2 data from ESA EOPF. Demonstrates collaborative annotation
using JupyterGIS, model retraining with expert corrections, and FAIR
research practices.
application/ld+json
https://w3id.org/ro-id/10dc322d-eedd-43ff-a4af-7adb6281cb6e
JupyterGIS Wetland ML Classification Demo - ESA EOPF
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "JupyterGIS Wetland ML Classification Demo - ESA EOPF." ROHub. Dec 21 ,2025. https://w3id.org/ro-id/10dc322d-eedd-43ff-a4af-7adb6281cb6e.
biblio
tool
input
output
Biodiversity
Methodology
IT-computer sciences
Science and technology/Technology and engineering/IT-computer sciences
machine learning workflow
29.345372460496613
26.0
computer science
100.0
11.7
machine learning
14.22475106685633
10.0
Psychology and Cognitive Sciences
data
15.443425076452598
10.1
none
Computer Software
Engineering (General)
Other Physical Sciences
Other Mathematical Sciences
Wetlands
Environment/Natural resources/Water/Wetlands
Other History and Archaeology
Other Commerce, Management, Tourism and Services
Other Engineering
JupyterGIS Wetland ML Classification Demo - ESA EOPF Human-in-the-loop machine learning workflow for wetland classification
using Sentinel-2 data from ESA EOPF.
69.06906906906906
69.0
research
7.798165137614677
5.1
Other Technology
JupyterGIS Wetland ML Classification Demo
17.780938833570413
12.5
Engineering
Other Language, Literature and Culture
Sentinel-2
13.371266002844951
9.4
Medical and Health Sciences
Other Philosophy and Religious Studies
Distributed Computing
Institutional: Government policies and programs
European Continent
Other Agricultural and Veterinary Sciences
Information and Computing Sciences
Technology
Education
Other Studies in Human Society
Other Studies in Creative Arts and Writing
Other Medical and Health Sciences
Agricultural and Veterinary Sciences
Studies in Creative Arts and Writing
Mathematical Sciences
wetland classification
29.006772009029344
25.7
Preparing the ground
wetland
7.339449541284403
4.8
Biodiversity: state of habitats and species
Other Psychology and Cognitive Sciences
collaborative annotation
13.31828442437923
11.8
Commerce, Management, Tourism and Services
classification
12.091038406827881
8.5
Physical Sciences
History and Archaeology
Teaching and learning
Education/Teaching and learning
Stakeholders
Knowledge Sector (EEA)
Key Type Measures
Law and Legal Studies
Mathematical Physics
Climate-ADAPT Adaptation Sectors
Physical and Technological
Geographical Scope
Academic/ Institutional
Data Format
Artifical Intelligence and Image Processing
Case Study
annotation
13.086770981507822
9.2
Environmental Science and Management
machine learning
14.984709480122325
9.8
Earth resources and remote sensing
Philosophy and Religious Studies
Geosciences (General)
Geosciences
Computer systems
Astronomical and Space Sciences
Computation Theory and Mathematics
Studies in Human Society
Other Information and Computing Sciences
Policy Scale
Funding
Other Education
Retraining
Labour/Employment/Employment training/Retraining
Demonstrates collaborative annotation
using JupyterGIS, model retraining with expert corrections, and FAIR
research practices.
30.93093093093093
30.9
note
13.608562691131498
8.9
research practice
20.428893905191874
18.1
data from Esa eopf
7.900677200902933
7.0
User Needs (RAST)
Mathematical and computer sciences (general)
Other Environmental Sciences
Environmental Sciences
Esa Eopf
workflow
11.009174311926605
7.2
Built Environment and Design
Other Law and Legal Studies
Computer programming and software
Engineering
Mathematical and computer sciences
IPCC
practice
7.339449541284403
4.8
Other Built Environment and Design
correction
9.174311926605505
6.0
Economics
data
14.366998577524894
10.1
Language, Communication and Culture
category
13.30275229357798
8.7
Esa Eopf
15.07823613086771
10.6
Climate Hazard
Education
Education
Academia/ Research Institutions
No policy or regulation
Other Economics
Information Systems
JupyterGIS Wetland ML Classification Demo
Applied sciences
https://fair2adapt.github.io/riomar-dashboard/
2026-03-20 15:22:58.427334+00:00
2026-03-20 18:12:17.330524+00:00
Dashboard
Dashboard
2026-03-20 15:22:58.427334+00:00
https://pangeo-eosc-minioapi.vm.fedcloud.eu/afouilloux-dggs/sentinel_bbox_l20_pyramid.zarr/7
2026-03-20 18:13:34.399299+00:00
2026-03-20 19:26:14.441919+00:00
sentinel_bbox_l20_pyramid.zarr
2026-03-20 18:13:34.399299+00:00
https://pangeo-eosc-minioapi.vm.fedcloud.eu/afouilloux-dggs/sentinel_bbox_l20_pyramid.zarr/7
Academia/ Research Institutions
HEALPix DGGS
15.098468271334792
6.9
Monitoring, evaluating and learning
HEALPix DGGS approach
23.11046511627907
15.9
Climate-ADAPT Adaptation Sectors
Rouen
Climate Hazard
database
28.448275862068968
3.3
Information Systems
Mathematical Sciences
Funding
Geographical Scope
Computer Software
Stakeholders
France
Mathematical and computer sciences
France
10.48951048951049
7.5
Methodology
none
Computer systems
pyramid
14.879649890590809
6.8
satellite
8.251748251748252
5.9
Paris
HEALPix Discrete Global Grid System
26.744186046511626
18.4
visualization
6.013986013986014
4.3
Normandie
Mathematical Physics
Social and information sciences
Physics
Case Study
Key Type Measures
computer science
30.17241379310345
3.5
Structural/physical: Ecosystem-based
Discrete Global Grid System
12.472647702407002
5.7
geometry
13.793103448275863
1.6
Information and Computing Sciences
Mathematical and computer sciences (general)
metadata
6.293706293706293
4.5
EU
pyramid
12.167832167832167
8.7
nested HEALPix
15.116279069767442
10.4
Geosciences (General)
collection
4.895104895104895
3.5
Engineering (General)
### FAIRification
- Satellite imagery converted to DGGS using [xhealpixify](https://github.com/IAOCEA/xhealpixify)
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization at any zoom level
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
23.014804845222073
17.1
### Dataset
- **Variable**: Band 02 (Blue, 490nm) top-of-atmosphere reflectance
- **Spatial coverage**: Normandy, France (~48.5°N–49.5°N, 0.5°E–1.5°E)
- **Grid**: HEALPix multiscale pyramid (11 levels)
- Finest: level 20 (nside=1,048,576, ~10m resolution, 208M cells)
- Coarsest: level 10 (nside=1,024, ~10km resolution)
- Resampling: mean aggregation between levels
- **Format**: Cloud-optimized Zarr with nested HEALPix indexing on WGS84 ellipsoid
26.514131897711973
19.7
User Needs (RAST)
Nanotechnology
Science and technology/Technology and engineering/Micro science/Nanotechnology
Physics (General)
http
13.426573426573427
9.6
Knowledge Sector (EEA)
IPCC
European Continent
Geosciences
reflectivity
7.972027972027972
5.7
Documentation and information science
dataset
13.006993006993008
9.3
Numerical and Computational Mathematics
Policy Scale
Normandie
10.48951048951049
7.5
FAIR2Adapt — Sentinel-2 B02 reflectance on HEALPix DGGS (multiscale pyramid) Sentinel-2 Level-1C satellite observation converted to a HEALPix Discrete Global Grid System (DGGS) multiscale pyramid, covering a region in **Normandy, France** (Seine Valley, between Rouen and Paris)
50.47106325706594
37.5
Statistics
information technology
27.586206896551726
3.2
Engineering
France
12.691466083150983
5.8
Earth resources and remote sensing
Climate change impacts, risks and adaptation
Physical and Technological
Physical Sciences
http
16.192560175054705
7.4
spirit level
6.993006993006993
5.0
Agriculture
Astronomical and Space Sciences
Regional policy
FAIR2Adapt
12.910284463894966
5.9
multiscale pyramid
10.755813953488373
7.4
IT-computer sciences
Science and technology/Technology and engineering/IT-computer sciences
dataset
15.754923413566738
7.2
satellite observation
24.27325581395349
16.7
Seine Valley
Data Format
2026-03-20 18:12:17.997118+00:00
0
https://api.rohub.org/api/ros/fdc1c071-76d7-44df-a565-8217ebcc59fe/crate/download/
2026-02-20 22:03:58.321018+00:00
2026-04-11 02:51:16.533696+00:00
2026-02-20 22:03:58.321018+00:00
Sentinel-2 Level-1C satellite observation converted to a HEALPix Discrete Global Grid System (DGGS) multiscale pyramid, covering a region in **Normandy, France** (Seine Valley, between Rouen and Paris).
### Dataset
- **Variable**: Band 02 (Blue, 490nm) top-of-atmosphere reflectance
- **Spatial coverage**: Normandy, France (~48.5°N–49.5°N, 0.5°E–1.5°E)
- **Grid**: HEALPix multiscale pyramid (11 levels)
- Finest: level 20 (nside=1,048,576, ~10m resolution, 208M cells)
- Coarsest: level 10 (nside=1,024, ~10km resolution)
- Resampling: mean aggregation between levels
- **Format**: Cloud-optimized Zarr with nested HEALPix indexing on WGS84 ellipsoid
### FAIRification
- Satellite imagery converted to DGGS using [xhealpixify](https://github.com/IAOCEA/xhealpixify)
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization at any zoom level
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
### Context
Part of the [FAIR2Adapt](https://fair2adapt.eu) project, demonstrating that the HEALPix DGGS approach works for both ocean model outputs and Earth observation data. The multiscale pyramid enables efficient visualization from global overview to full 10m resolution.
application/ld+json
https://w3id.org/ro-id/fdc1c071-76d7-44df-a565-8217ebcc59fe
FAIR2Adapt — Sentinel-2 B02 reflectance on HEALPix DGGS (multiscale pyramid)
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "FAIR2Adapt — Sentinel-2 B02 reflectance on HEALPix DGGS (multiscale pyramid)." ROHub. Feb 20 ,2026. https://w3id.org/ro-id/fdc1c071-76d7-44df-a565-8217ebcc59fe.
View Sentinel-2 data in FAIR2Adapt Dashboard
https://fair2adapt.github.io/riomar-dashboard/#{dataset_url}
The Sentinel-2 Level-1C satellite observation can be converted to a HEALPix DGGS multiscale pyramid, enabling efficient visualization from global overview to 10m resolution.
The HEALPix DGGS multiscale pyramid allows for efficient visualization of Sentinel-2 Level-1C satellite data from global overview to 10m resolution.
The Sentinel-2 Level-1C satellite observation is converted to a HEALPix DGGS multiscale pyramid, covering a region in Normandy, France, with a spatial coverage of ~48.5°N–49.5°N, 0.5°E–1.5°E.
The HEALPix multiscale pyramid has 11 levels, with the finest level having a resolution of approximately 10 meters and the coarsest level having a resolution of approximately 10 kilometers.
Mean aggregation between levels is used for resampling in the HEALPix multiscale pyramid.
The dataset is stored in a Cloud-optimized Zarr format with nested HEALPix indexing on the WGS84 ellipsoid, enabling efficient data retrieval and visualization.
The Sentinel-2 Level-1C satellite observation was successfully converted to a HEALPix Discrete Global Grid System (DGGS) multiscale pyramid using the xhealpixify tool.
The dataset is machine-actionable, allowing for interactive visualization at any zoom level through the FAIR2Adapt dashboard.
I-ADOPT variable decomposition is applied to the metadata of the Sentinel-2 Level-1C satellite observation dataset.
The HEALPix Discrete Global Grid System (DGGS) can be applied to both ocean model outputs and Earth observation data, such as Sentinel-2 Level-1C satellite observations, for efficient visualization and analysis.
biblio
output
tool
input
Normandy, France (Seine Valley)
Sentinel-2 b02 reflectance
https://w3id.org/sciencelive/np/RA2Cp-j2iDsRzhpuoyq6rqhZCjCV6GFX3qOmt68irgRRs
2026-03-22 10:50:50.167563+00:00
2026-03-22 10:50:50.525764+00:00
AIDA Claim 4: The dataset is machine-actionable, allowing for interactive visualization at any...
2026-03-22 10:50:50.167563+00:00
https://w3id.org/sciencelive/np/RA4unVW6jtvBeBsMW_XM69mXq-umYgZ35GA3TT4DtoJcw
2026-03-22 10:50:47.231042+00:00
2026-03-22 10:50:47.597248+00:00
AIDA Claim 3: The dataset is stored in a Cloud-optimized Zarr format with nested HEALPix index...
2026-03-22 10:50:47.231042+00:00
https://w3id.org/sciencelive/np/RA6lk8d22TSZCdI2WnnZXAm2aO5JMvaEVM1zlpR6BdaLM
2026-03-22 10:51:02.220190+00:00
2026-03-22 10:51:02.595615+00:00
AIDA Claim 8: The Sentinel-2 Level-1C satellite observation was successfully converted to a HE...
2026-03-22 10:51:02.220190+00:00
https://w3id.org/sciencelive/np/RAAES9N-NOvhLFhdkybwLFzvx6sseVlH8B5t6woBpJf_Y
2026-03-22 10:50:53.297244+00:00
2026-03-22 10:50:53.658092+00:00
AIDA Claim 5: The HEALPix Discrete Global Grid System (DGGS) can be applied to both ocean mode...
2026-03-22 10:50:53.297244+00:00
https://w3id.org/sciencelive/np/RAISh_0MxXiTLY_5F1FUo0hECp2wPhI0RsLbPeiamW6pw
2026-03-22 10:50:59.299305+00:00
2026-03-22 10:50:59.670709+00:00
AIDA Claim 7: Mean aggregation between levels is used for resampling in the HEALPix multiscale...
2026-03-22 10:50:59.299305+00:00
https://w3id.org/sciencelive/np/RAJwqE_J7SsyDKi3aH6MkLvJlMf0N_9mVlx83_Ka0jT9M
2026-03-22 10:51:08.175488+00:00
2026-03-22 10:51:08.570679+00:00
AIDA Claim 10: The Sentinel-2 Level-1C satellite observation can be converted to a HEALPix DGGS...
2026-03-22 10:51:08.175488+00:00
https://w3id.org/sciencelive/np/RAaJZOla75L703Yidp2zrTxDPLxKKaUVyCyr3GRacTtAI
2026-03-22 10:50:44.309113+00:00
2026-03-22 10:50:44.682697+00:00
AIDA Claim 2: The HEALPix multiscale pyramid has 11 levels, with the finest level having a res...
2026-03-22 10:50:44.309113+00:00
https://w3id.org/sciencelive/np/RAbOTm3IKX_isnQvjnNePD9i6I1EiwqjFeukAwDvH7avY
2026-03-22 10:51:05.331972+00:00
2026-03-22 10:51:05.672327+00:00
AIDA Claim 9: I-ADOPT variable decomposition is applied to the metadata of the Sentinel-2 Leve...
2026-03-22 10:51:05.331972+00:00
https://w3id.org/sciencelive/np/RAoxsjIwlHNmLaHjZ5isgye2W7ttFTtk7H6NVdBvugGJY
2026-03-22 10:50:40.600533+00:00
2026-03-22 10:50:40.958827+00:00
AIDA Claim 1: The HEALPix DGGS multiscale pyramid allows for efficient visualization of Sentin...
2026-03-22 10:50:40.600533+00:00
https://w3id.org/sciencelive/np/RAridbsSM86NKY8_8ndXhNBX563gMIHNrR7hBy8hCR0XE
2026-03-22 10:50:56.145571+00:00
2026-03-22 10:50:56.546047+00:00
AIDA Claim 6: The Sentinel-2 Level-1C satellite observation is converted to a HEALPix DGGS mul...
2026-03-22 10:50:56.145571+00:00
Earth sciences
10.24424/e8am-pd37
https://github.com/FAIR2Adapt/urban_pfr_toolbox_hamburg
2026-03-21 12:56:39.535363+00:00
2026-03-21 12:56:42.651509+00:00
Python package conversion of the ArcGIS workflow from Urban Pluvial Flood Risk Mapping: A High-Resolution Assessment for the City of Hamburg (von Szombathely et al., 2025).
Urban Pluvial Flood Risk Assessment
2026-03-21 12:56:39.535363+00:00
POLYGON ((9.849243164062502 53.525615259225226, 9.849243164062502 53.643009642582335, 10.1898193359375 53.643009642582335, 10.1898193359375 53.525615259225226, 9.849243164062502 53.525615259225226))
9.849243164062502 53.525615259225226, 9.849243164062502 53.643009642582335, 10.1898193359375 53.643009642582335, 10.1898193359375 53.525615259225226, 9.849243164062502 53.525615259225226
ad6788c7-ad07-4290-b24b-cd990a931c1d
POLYGON ((9.849243164062502 53.525615259225226, 9.849243164062502 53.643009642582335, 10.1898193359375 53.643009642582335, 10.1898193359375 53.525615259225226, 9.849243164062502 53.525615259225226))
0
https://api.rohub.org/api/ros/8ee17c14-089e-40a7-98ea-023dd03358fc/crate/download/
2026-03-21 12:55:13.194418+00:00
2026-04-21 18:38:20.301920+00:00
2026-03-21 12:55:13.194418+00:00
Python package conversion of the ArcGIS workflow from Urban Pluvial Flood Risk Mapping: A High-Resolution Assessment for the City of Hamburg (von Szombathely et al., 2025).
application/ld+json
https://w3id.org/ro-id/8ee17c14-089e-40a7-98ea-023dd03358fc
Urban Pluvial Flood Risk Assessment
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
GONZALEZ GUARDIA, ESTEBAN. "Urban Pluvial Flood Risk Assessment." ROHub. Mar 21 ,2026. https://w3id.org/ro-id/8ee17c14-089e-40a7-98ea-023dd03358fc.
POLYGON ((9.849243164062502 53.525615259225226, 9.849243164062502 53.643009642582335, 10.1898193359375 53.643009642582335, 10.1898193359375 53.525615259225226, 9.849243164062502 53.525615259225226))
output
biblio
input
tool
Szombathely
11.533586818757923
9.1
Identification of risks
Weather
Weather
Environmental Science and Management
python
17.748917748917748
12.3
Knowledge and Behavioural Change
Computer Software
assessment
15.728715728715729
10.9
workflow
12.265512265512266
8.5
Academia/ Research Institutions
Academic/ Institutional
flood risk assessment python package conversion
5.751173708920187
4.9
package
19.624819624819626
13.6
Szombathely
13.131313131313131
9.1
Knowledge Sector (EEA)
Climate Hazard
assessment
13.814955640050698
10.9
Meteorology and climatology
conversion of the ArcGIS workflow
32.27699530516431
27.5
Stakeholders
flood risk
18.25095057034221
14.4
Key Type Measures
Language
Arts, culture and entertainment/Culture/Language
Engineering
flood risk assessment python package conversion of the ArcGIS workflow
3.5211267605633796
3.0
Urban
Mathematical and computer sciences
Computer programming and software
von Szombathely
8.68544600938967
7.4
package
17.49049429657795
13.8
Geosciences (General)
Geosciences
Hamburg
13.70851370851371
9.5
Local policy
Modeling/ Simulation
Hamburg
12.040557667934095
9.5
Policy Scale
Hamburg
Geographical Scope
workflow
10.899873257287707
8.6
Funding
Environment pollution
Szombathely
Environmental Sciences
Information and Computing Sciences
none
User Needs (RAST)
python
15.969581749049432
12.6
IPCC
Climate-ADAPT Adaptation Sectors
Extreme weather: floods, droughts, heatwaves
Flooding
Fluid mechanics and thermodynamics
none
city
7.792207792207792
5.4
Urban and Regional Planning
assessment python package conversion
49.76525821596243
42.4
Built Environment and Design
Urban Pluvial Flood Risk Assessment Python package conversion of the ArcGIS workflow from Urban Pluvial Flood Risk Mapping: A High-Resolution Assessment for the City of Hamburg (von Szombathely et al., 2025)
100.0
100.0
Methodology
ESTEBAN GONZALEZ GUARDIA
Applied sciences
https://fair2adapt.duckdns.org/afouilloux-noresm/JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 14:36:50.419688+00:00
2026-03-21 14:36:51.227235+00:00
JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 14:36:50.419688+00:00
https://fair2adapt.github.io/riomar-dashboard/
2026-03-20 15:22:58.427334+00:00
2026-03-21 13:58:21.687298+00:00
Dashboard
Dashboard
2026-03-20 15:22:58.427334+00:00
https://fair2adapt.duckdns.org/afouilloux-noresm/JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 13:58:22.446540+00:00
0
https://api.rohub.org/api/ros/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965/crate/download/
2026-02-20 22:03:58.321018+00:00
2026-03-23 09:45:52.099813+00:00
2026-02-20 22:03:58.321018+00:00
Ocean reanalysis data from the **NorESM2/BLOM** model (JRA-OC20 forcing), providing monthly average sea surface temperature and 3D ocean temperature fields for 2010–2018.
### Dataset
- **Variables**: sea surface temperature (SST), ocean temperature on 53 sigma density levels
- **Temporal coverage**: January 2010 – December 2018, monthly averages (108 timesteps)
- **Spatial coverage**: Near-global ocean (-80°S to 90°N), BLOM tripolar curvilinear grid (385×360)
- **Grid**: Original BLOM tripolar curvilinear grid with 2D latitude/longitude coordinates
- **Format**: Cloud-optimized Zarr (Zstd compressed)
### FAIRification
- NetCDF model outputs converted to Zarr with 2D coordinates from the BLOM grid file
- Served through an authenticated HTTPS proxy for access-controlled sharing
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
### Context
Part of the [FAIR2Adapt](https://fair2adapt.eu) project. Data generated by Yanchun He (NERSC) and formatted by NERSC under the FAIR2Adapt project (EU grant 101188256). Licensed under CC-BY 4.0.
application/ld+json
https://w3id.org/ro-id/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965
FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018." ROHub. Feb 20 ,2026. https://w3id.org/ro-id/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965.
View ARCTIC dataset in dashboard
https://fair2adapt.github.io/riomar-dashboard/#{dataset_url}
tool
output
input
biblio
Global ocean (-80S to 90N)
Ocean surface temperature
Temperature
re-analysis
5.837173579109062
3.8
108 timesteps
NorESM2
sea surface temperature
13.013698630136986
5.7
information technology
31.645569620253166
7.5
Physical and Technological
Information Systems
proxy server
8.755760368663593
5.7
Earth Sciences
Oceans
Environment/Natural resources/Water/Oceans
Meteorology and climatology
Geosciences
Engineering (General)
Cloud-optimized Zarr
16.504854368932037
10.2
FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018 Ocean reanalysis data from the **NorESM2/BLOM** model (JRA-OC20 forcing), providing monthly average sea surface temperature and 3D ocean temperature fields for 2010–2018.
46.51162790697674
40.0
coordinate
12.78538812785388
5.6
European Continent
database
26.582278481012658
6.3
User Needs (RAST)
Key Type Measures
Weather statistic
Weather/Weather statistic
sea surface temperature
11.82795698924731
7.7
Environmental Science and Management
Policy Scale
Environmental Sciences
Yanchun He
NERSC
Geosciences (General)
Fluid mechanics and thermodynamics
Climate Hazard
Data on climate-relate hazards
Data Format
Engineering
output
8.755760368663593
5.7
Oceanography
### FAIRification
- NetCDF model outputs converted to Zarr with 2D coordinates from the BLOM grid file
- Served through an authenticated HTTPS proxy for access-controlled sharing
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
22.093023255813954
19.0
Climatology
Computer Software
European Union
grid
14.15525114155251
6.2
Information and Computing Sciences
Sea Level Rise
ocean temperature
23.300970873786408
14.4
### Dataset
- **Variables**: sea surface temperature (SST), ocean temperature on 53 sigma density levels
- **Temporal coverage**: January 2010 – December 2018, monthly averages (108 timesteps)
- **Spatial coverage**: Near-global ocean (-80°S to 90°N), BLOM tripolar curvilinear grid (385×360)
- **Grid**: Original BLOM tripolar curvilinear grid with 2D latitude/longitude coordinates
- **Format**: Cloud-optimized Zarr (Zstd compressed)
31.3953488372093
27.0
Geographical Scope
Zstd
IT-computer sciences
Science and technology/Technology and engineering/IT-computer sciences
Oceanography
No policy or regulation
BLOM
14.383561643835614
6.3
Funding
Methodology
Knowledge Sector (EEA)
dataset
15.753424657534245
6.9
Academia/ Research Institutions
Zarr
grid network
13.056835637480797
8.5
NetCDF
coordinate
11.674347158218124
7.6
BLOM grid
26.051779935275086
16.1
ocean reanalysis
14.563106796116505
9.0
Jan-2010 - Dec-2018
Zarr
12.557077625570775
5.5
dataset
13.978494623655912
9.1
Structural/physical: Technological
http
17.35159817351598
7.6
http
15.821812596006142
10.3
Climate-ADAPT Adaptation Sectors
temperature
10.291858678955451
6.7
Physics
BLOM tripolar curvilinear grid
19.57928802588997
12.1
Climate change impacts, risks and adaptation
none
2010-2018
computer science
41.77215189873418
9.9
IPCC
Stakeholders
Physics (General)
Academic/ Institutional
Applied sciences
https://fair2adapt.duckdns.org/afouilloux-noresm/JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 14:36:50.419688+00:00
2026-03-21 14:36:51.227235+00:00
JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 14:36:50.419688+00:00
https://fair2adapt.github.io/riomar-dashboard/
2026-03-20 15:22:58.427334+00:00
2026-03-21 13:58:21.687298+00:00
Dashboard
Dashboard
2026-03-20 15:22:58.427334+00:00
https://fair2adapt.duckdns.org/afouilloux-noresm/JRAOC20TRNRPv2_2010-2018.zarr
2026-03-21 13:58:22.446540+00:00
0
https://api.rohub.org/api/ros/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965/crate/download/
2026-02-20 22:03:58.321018+00:00
2026-03-23 09:45:52.099813+00:00
2026-02-20 22:03:58.321018+00:00
Ocean reanalysis data from the **NorESM2/BLOM** model (JRA-OC20 forcing), providing monthly average sea surface temperature and 3D ocean temperature fields for 2010–2018.
### Dataset
- **Variables**: sea surface temperature (SST), ocean temperature on 53 sigma density levels
- **Temporal coverage**: January 2010 – December 2018, monthly averages (108 timesteps)
- **Spatial coverage**: Near-global ocean (-80°S to 90°N), BLOM tripolar curvilinear grid (385×360)
- **Grid**: Original BLOM tripolar curvilinear grid with 2D latitude/longitude coordinates
- **Format**: Cloud-optimized Zarr (Zstd compressed)
### FAIRification
- NetCDF model outputs converted to Zarr with 2D coordinates from the BLOM grid file
- Served through an authenticated HTTPS proxy for access-controlled sharing
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
### Context
Part of the [FAIR2Adapt](https://fair2adapt.eu) project. Data generated by Yanchun He (NERSC) and formatted by NERSC under the FAIR2Adapt project (EU grant 101188256). Licensed under CC-BY 4.0.
application/ld+json
https://w3id.org/ro-id/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965
FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne. "FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018." ROHub. Feb 20 ,2026. https://w3id.org/ro-id/1f0b5044-ae4f-483d-b7a2-48a5a6ac3965.
View ARCTIC dataset in dashboard
https://fair2adapt.github.io/riomar-dashboard/#{dataset_url}
tool
output
input
biblio
Global ocean (-80S to 90N)
Ocean surface temperature
Temperature
re-analysis
5.837173579109062
3.8
108 timesteps
NorESM2
sea surface temperature
13.013698630136986
5.7
information technology
31.645569620253166
7.5
Physical and Technological
Information Systems
proxy server
8.755760368663593
5.7
Earth Sciences
Oceans
Environment/Natural resources/Water/Oceans
Meteorology and climatology
Geosciences
Engineering (General)
Cloud-optimized Zarr
16.504854368932037
10.2
FAIR2Adapt ARCTIC — NorESM2 ocean reanalysis (SST + Temperature) 2010-2018 Ocean reanalysis data from the **NorESM2/BLOM** model (JRA-OC20 forcing), providing monthly average sea surface temperature and 3D ocean temperature fields for 2010–2018.
46.51162790697674
40.0
coordinate
12.78538812785388
5.6
European Continent
database
26.582278481012658
6.3
User Needs (RAST)
Key Type Measures
Weather statistic
Weather/Weather statistic
sea surface temperature
11.82795698924731
7.7
Environmental Science and Management
Policy Scale
Environmental Sciences
Yanchun He
NERSC
Geosciences (General)
Fluid mechanics and thermodynamics
Climate Hazard
Data on climate-relate hazards
Data Format
Engineering
output
8.755760368663593
5.7
Oceanography
### FAIRification
- NetCDF model outputs converted to Zarr with 2D coordinates from the BLOM grid file
- Served through an authenticated HTTPS proxy for access-controlled sharing
- Machine-actionable: `schema:ViewAction` links the dataset to the [FAIR2Adapt dashboard](https://fair2adapt.github.io/riomar-dashboard/) for interactive visualization
- Metadata enriched with [I-ADOPT](https://i-adopt.github.io/) variable decomposition
22.093023255813954
19.0
Climatology
Computer Software
European Union
grid
14.15525114155251
6.2
Information and Computing Sciences
Sea Level Rise
ocean temperature
23.300970873786408
14.4
### Dataset
- **Variables**: sea surface temperature (SST), ocean temperature on 53 sigma density levels
- **Temporal coverage**: January 2010 – December 2018, monthly averages (108 timesteps)
- **Spatial coverage**: Near-global ocean (-80°S to 90°N), BLOM tripolar curvilinear grid (385×360)
- **Grid**: Original BLOM tripolar curvilinear grid with 2D latitude/longitude coordinates
- **Format**: Cloud-optimized Zarr (Zstd compressed)
31.3953488372093
27.0
Geographical Scope
Zstd
IT-computer sciences
Science and technology/Technology and engineering/IT-computer sciences
Oceanography
No policy or regulation
BLOM
14.383561643835614
6.3
Funding
Methodology
Knowledge Sector (EEA)
dataset
15.753424657534245
6.9
Academia/ Research Institutions
Zarr
grid network
13.056835637480797
8.5
NetCDF
coordinate
11.674347158218124
7.6
BLOM grid
26.051779935275086
16.1
ocean reanalysis
14.563106796116505
9.0
Jan-2010 - Dec-2018
Zarr
12.557077625570775
5.5
dataset
13.978494623655912
9.1
Structural/physical: Technological
http
17.35159817351598
7.6
http
15.821812596006142
10.3
Climate-ADAPT Adaptation Sectors
temperature
10.291858678955451
6.7
Physics
BLOM tripolar curvilinear grid
19.57928802588997
12.1
Climate change impacts, risks and adaptation
none
2010-2018
computer science
41.77215189873418
9.9
IPCC
Stakeholders
Physics (General)
Academic/ Institutional
Applied sciences
Climatology
https://doi.org/10.5281/zenodo.4543739
2022-03-28 14:18:39.324751+00:00
2022-03-29 12:31:10.297007+00:00
By deploying JupyterLab with PANGEO, CESM and ESMValTool conda environments as a new Climate Galaxy interactive tool, we are aiming at bridging the gap between climate scientists and non-climate specialists.
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational research. One of the strength of Galaxy is that it does not require programming experience and allow researchers to easily upload data, run complex tools and workflows in a reproducible manner, and visualize results. Galaxy Climate is quite new and aims at offering tools to everyone interested in Climate Science so that they can analyse and visualize climate data produced by climate scientists. However, climate scientists and in particular climate modellers have very different working practices: they often like to use command lines for running climate models and thanks to the PANGEO community (a community platform for Big Data geoscience) the Jupyter ecosystem has become very popular with several deployments of JupyterHubs dedicated to climate data analysis. By deploying JupyterLab with PANGEO, CESM and ESMValTool conda environments as a new Climate Galaxy interactive tool (https://live.usegalaxy.eu/?tool_id=interactive_tool_climate_notebook), we are aiming at bridging the gap between climate scientists and non-climate specialists. On this poster, we will show typical use cases both for research (https://nordicesmhub.github.io/eosc-nordic-climate-demonstrator/02-use-cases/) and for teaching (https://nordicesmhub.github.io/NEGI-Abisko-2019/intro).
Climate JupyterLab as an interactive tool in Galaxy
2022-03-28 14:18:39.324751+00:00
https://doi.org/10.5281/zenodo.6394185
2022-03-29 17:55:05.034625+00:00
2022-03-29 17:55:28.200093+00:00
This is a tarball for the Docker climate-JupyterLab image - Version 2021-03-18.
To use it:
download the image file docker-climate-notebook-2021-03-18.tar
load it with docker with the command: docker load --input docker-climate-notebook-2021-03-18.tar
launch the Docker container binding of your data folder (on the local machine) with the /import folder i(inside the container) with the command: docker run -v my_data_folder:/import -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
start your favorite web browser and go to: http://localhost:7777/ipython/
See https://github.com/NordicESMhub/docker-climate-notebook for more details
Docker climate-JupyterLab image Version 2021-03-18
2022-03-29 17:55:05.034625+00:00
https://github.com/NordicESMhub/docker-climate-notebook
2022-03-29 12:01:31.834492+00:00
2022-03-29 12:01:32.864725+00:00
This github repository contains all the sources required for building the docker containers that are made available in Quay Container Registry.
Source code for building the docker container (github repository)
2022-03-29 12:01:31.834492+00:00
https://jupyterlab.readthedocs.io/en/stable/
2022-03-28 14:14:45.648769+00:00
2022-03-28 14:14:48.916367+00:00
Link to the online JupyterLab documentation.
JupyterLab Documentation
2022-03-28 14:14:45.648769+00:00
University of Freiburg, Freiburg (Germany)
bjoern.gruening@gmail.com
Björn Grüning
0000-0002-3079-6586
https://quay.io/repository/nordicesmhub/docker-climate-notebook
2022-03-29 11:58:28.213223+00:00
2022-03-29 11:58:28.966930+00:00
These docker images (different tags) correspond to the docker images built for Galaxy Climate JupyterLab.
The docker images can be used within Galaxy and as standalone docker images.
You can use the same images we use in Galaxy on your local computer or any other platform:
1. Pull an existing image locally
docker pull quay.io/nordicesmhub/docker-climate-notebook
2. Run a pre-build image from docker registry
3. To start your JupyterLab:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook
and you will top open a new terminal and start your favorite web browser.
your running Jupyter Notebook instance on http://localhost:7777/ipython/.
Remark: for reproducibility purpose, we suggest you use a specific tag e.g.
docker pull quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
Then use the same tag when starting your JupyterLab application:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
Docker images for Galaxy Climate JupyterLab (Quay Container Registry)
2022-03-29 11:58:28.213223+00:00
https://raw.githubusercontent.com/NordicESMhub/docker-climate-notebook/ie2/climate-jupyter-galaxy_web.gif
2022-03-29 11:41:30.552728+00:00
2022-03-29 11:41:31.321829+00:00
This is a gif animated image showing how to start the Galaxy Climate JupyterLab in Galaxy Europe
image/gif
How to start Galaxy Climate JupyterLab (gif animated)
2022-03-29 11:41:30.552728+00:00
https://raw.githubusercontent.com/NordicESMhub/docker-climate-notebook/ie2/map_vis_Galaxy.gif
2022-03-29 11:43:11.075459+00:00
2022-03-29 11:44:13.311536+00:00
This is a gif animated image showing some of the functionalities of the Galaxy Climate JupyterLab
image/gif
Demo of some of the functionalities of the Galaxy Climate JupyterLab (gif animated)
2022-03-29 11:43:11.075459+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
2022-03-30 15:55:20.341672+00:00
False
2022-03-29 18:08:11.857053+00:00
docker container
17.88793103448276
16.6
shipping container
23.324022346368718
16.7
Climate
5.112474437627812
5.0
container
17.45810055865922
12.5
docker Climate analysis Jupyter container
7.004310344827586
6.5
image
11.452513966480446
8.2
Waterway and maritime transport
Economy, business and finance/Economic sector/Transport/Waterway and maritime transport
atmospheric sciences
100.0
0.8577955365180969
Jupyter Docker container
7.112068965517242
6.6
http
7.262569832402235
5.2
Samsung Galaxy
31.005586592178773
22.2
Docker Climate Analysis Jupyter Container.
33.460559796437664
26.3
Occupations
Labour/Employment/Occupations
r. This image can be used to integrate Jupyter into Gala
34.09669211195929
26.8
loader
9.497206703910615
6.8
y. This Jupyter Docker container is used by the Galaxy Project and can be installed from the quay.io index (https://quay.io/repository/nordicesmhub/docker-climate-notebo
32.44274809160306
25.5
integrate Jupyter
4.310344827586207
4.0
analysis Jupyter container
63.685344827586206
59.1
Wireless technology
Economy, business and finance/Economic sector/Computing and information technology/Wireless technology
docker
6.6462167689161555
6.5
Jupyter
25.869120654396728
25.3
Samsung Galaxy
26.789366053169736
26.2
image
8.895705521472392
8.7
mathematical and computer sciences
100.0
0.7481239438056946
earth sciences
100.0
0.8577955365180969
http
6.543967280163599
6.4
container
20.143149284253578
19.7
computer programming and software
100.0
0.7481239438056946
7.8337097307667145
48.01044395569975
POINT (7.8337097307667145 48.01044395569975)
12aaf30f-c9e6-4402-b143-6fef6ccf96da
POINT (10.766601562500002 59.921531172441085)
b13e19bc-25cc-4219-b1fa-699c641da28c
POINT (7.8337097307667145 48.01044395569975)
10.766601562500002
59.921531172441085
POINT (10.766601562500002 59.921531172441085)
31827
https://api.rohub.org/api/ros/f55e746b-6a1e-4712-ac21-a3c99869783d/crate/download/
2022-03-26 09:45:54.364171+00:00
2025-10-18 11:54:43.023442+00:00
2022-03-26 09:45:54.364171+00:00
🐳 🔬 📚 Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy. This Jupyter Docker container is used by the Galaxy Project and can be installed from the quay.io index (https://quay.io/repository/nordicesmhub/docker-climate-notebook).
application/ld+json
https://w3id.org/ro-id/f55e746b-6a1e-4712-ac21-a3c99869783d
cesm
climate
docker
esmvaltool
jupyterlab
pangeo
Docker Climate Analysis Jupyter Container
MANUAL
Anne Foilloux, and Björn Grüning. "Docker Climate Analysis Jupyter Container." ROHub. Mar 26 ,2022. https://w3id.org/ro-id/f55e746b-6a1e-4712-ac21-a3c99869783d.
POINT (7.8337097307667145 48.01044395569975)
POINT (10.766601562500002 59.921531172441085)
output
tool
biblio
input
6716
https://api.rohub.org/api/resources/1ed42fe1-b9ab-45aa-93fa-e4711e59ee46/download/
2022-03-29 12:06:48.073820+00:00
2022-03-29 12:06:52.673203+00:00
This is the Galaxy Climate JupyterLab tool wrapper used by Galaxy to start the Galaxy Climate JupyterLab on a Galaxy instance.
application/xml
Galaxy Climate JupyterLab Tool wrapper (xml)
2022-03-29 12:06:48.073820+00:00
29705
https://api.rohub.org/api/resources/c478e527-cbca-4660-b2fa-cbfc9124b7d6/download/
2022-03-29 12:16:49.457762+00:00
2022-03-29 12:16:54.235688+00:00
Most of the resources and information of this Research Object were created from this Jupyter Notebook.
Jupyter Notebook used to create/update this Research Object
2022-03-29 12:16:49.457762+00:00
1729
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Default Jupyter Notebook used when starting Galaxy Climate JupyterLab if no other Jupyter Notebook is passed by the user.
Default Jupyter Notebook for Galaxy Climate JupyterLab
2022-03-29 12:08:38.781608+00:00
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
service-account-enrichment
Economic geography
Applied sciences
Climatology
https://github.com/NordicESMhub/DIAM
2022-04-02 10:28:02.316031+00:00
2022-04-02 10:28:03.068630+00:00
Private Github repository containing the source code for DIAM economic model.
DIAM economic model (private github repo)
2022-04-02 10:28:02.316031+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
10055
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2022-03-27 09:41:06.094693+00:00
2025-10-18 11:54:37.705484+00:00
2022-03-27 09:41:06.094693+00:00
This Research Object is related to the work on the coupling of the Norwegian Earth System Model with DIAM economic model to explore the economic impact of climate change.
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economic models
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Coupling NorESM and DIAM economic model
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Anne Foilloux, and Jenny Bjordal. "Coupling NorESM and DIAM economic model." ROHub. Mar 27 ,2022. https://w3id.org/ro-id/e05b90f7-5c22-4741-8b27-c43f5a5d70b4.
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This Research Object is related to the work on the coupling of the Norwegian Earth System Model with DIAM economic model to explore the economic impact of climate change.
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Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
jenny.bjordal@rohub.com
Jenny Bjordal
admin NordicESMHub
service-account-enrichment
Environmental research
Ecology
https://doi.org/10.5281/zenodo.5494629
2022-03-27 19:36:02.837817+00:00
2022-03-27 19:36:04.663786+00:00
Contains input Datasets of detectreeRGB AI4ER MRes Project used in the Jupyter notebook of Tree crown delineation using detectreeRGB
Input Datasets of detectreeRGB AI4ER MRes Project
2022-03-27 19:36:02.837817+00:00
https://doi.org/10.5281/zenodo.6387953
2022-03-27 19:36:05.938260+00:00
2022-03-27 19:36:08.079903+00:00
Contains outputs, (vector, raster and figures), generated in the Jupyter notebook of Tree crown delineation using detectreeRGB
Outputs
2022-03-27 19:36:05.938260+00:00
https://edsbook.org/notebooks/gallery/94486a7f-e046-461f-bbb9-334ec7b57040/notebook.html
2022-03-27 20:06:13.133384+00:00
2023-03-20 17:55:40.164091+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
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Online rendered version of the Jupyter notebook
2022-03-27 20:06:13.133384+00:00
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Lock conda file for linux-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for linux-64
2022-03-27 20:06:15.896048+00:00
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Lock conda file for osx-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for osx-64
2022-03-27 20:06:19.150229+00:00
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2022-03-27 20:06:22.327765+00:00
2023-03-20 17:54:03.329146+00:00
Pip requirements file containing libraries to install after conda lock
text/plain
Pip requirements for lock conda environments
2022-03-27 20:06:22.327765+00:00
https://github.com/shmh40/detectreeRGB
2022-03-27 19:36:09.352889+00:00
2022-03-27 19:36:10.266703+00:00
Related publication of the modelling presented in the Jupyter notebook
detectreeRGB source code
2022-03-27 19:36:09.352889+00:00
https://raw.githubusercontent.com/eds-book-gallery/94486a7f-e046-461f-bbb9-334ec7b57040/main/.binder/environment.yml
2022-03-27 20:06:25.797573+00:00
2023-03-20 17:54:19.636105+00:00
Conda environment when user want to have the same libraries installed without concerns of package versions
Conda environment
2022-03-27 20:06:25.797573+00:00
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Jupyter Notebook hosted by the Environmental Data Science Book
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2022-03-27 19:36:00.835434+00:00
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2022-03-27 19:35:37.653424+00:00
The research object refers to the Tree crown delineation using detectreeRGB notebook published in the Environmental Data Science book.
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Environmental Science
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Tree crown delineation using detectreeRGB (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
Sebastian H. M. Hickman, and Alejandro Coca-Castro. "Tree crown delineation using detectreeRGB (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Mar 27 ,2022. https://w3id.org/ro-id/94486a7f-e046-461f-bbb9-334ec7b57040.
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Image showing interactive plot of detectreeRGB model predictions of tree crown over a sample drone image in Sepilok, Sabah, Malaysia
2022-03-27 19:35:54.932203+00:00
2023-05-03 14:48:41.389917+00:00
Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
The research object refers to the Tree crown delineation using detectreeRGB notebook published in the Environmental Data Science book.
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Environmental Data Science Book Community
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The Alan Turing Institute
Alejandro Coca-Castro
University of Cambridge
Sebastian H. M. Hickman
service-account-enrichment
Applied sciences
Climatology
10.13039/501100000781
European Commission
https://doi.org/10.5281/zenodo.4543739
2022-03-28 14:18:39.324751+00:00
2022-03-29 18:08:07.800368+00:00
By deploying JupyterLab with PANGEO, CESM and ESMValTool conda environments as a new Climate Galaxy interactive tool, we are aiming at bridging the gap between climate scientists and non-climate specialists.
Galaxy is an open, web-based platform for accessible, reproducible, and transparent computational research. One of the strength of Galaxy is that it does not require programming experience and allow researchers to easily upload data, run complex tools and workflows in a reproducible manner, and visualize results. Galaxy Climate is quite new and aims at offering tools to everyone interested in Climate Science so that they can analyse and visualize climate data produced by climate scientists. However, climate scientists and in particular climate modellers have very different working practices: they often like to use command lines for running climate models and thanks to the PANGEO community (a community platform for Big Data geoscience) the Jupyter ecosystem has become very popular with several deployments of JupyterHubs dedicated to climate data analysis. By deploying JupyterLab with PANGEO, CESM and ESMValTool conda environments as a new Climate Galaxy interactive tool (https://live.usegalaxy.eu/?tool_id=interactive_tool_climate_notebook), we are aiming at bridging the gap between climate scientists and non-climate specialists. On this poster, we will show typical use cases both for research (https://nordicesmhub.github.io/eosc-nordic-climate-demonstrator/02-use-cases/) and for teaching (https://nordicesmhub.github.io/NEGI-Abisko-2019/intro).
Climate JupyterLab as an interactive tool in Galaxy
2022-03-28 14:18:39.324751+00:00
https://doi.org/10.5281/zenodo.6394185
2022-03-29 17:55:05.034625+00:00
2022-03-29 18:08:05.535928+00:00
This is a tarball for the Docker climate-JupyterLab image - Version 2021-03-18.
To use it:
download the image file docker-climate-notebook-2021-03-18.tar
load it with docker with the command: docker load --input docker-climate-notebook-2021-03-18.tar
launch the Docker container binding of your data folder (on the local machine) with the /import folder i(inside the container) with the command: docker run -v my_data_folder:/import -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
start your favorite web browser and go to: http://localhost:7777/ipython/
See https://github.com/NordicESMhub/docker-climate-notebook for more details
Docker climate-JupyterLab image Version 2021-03-18
2022-03-29 17:55:05.034625+00:00
https://github.com/NordicESMhub/docker-climate-notebook
2022-03-29 12:01:31.834492+00:00
2022-03-29 18:08:06.488065+00:00
This github repository contains all the sources required for building the docker containers that are made available in Quay Container Registry.
Source code for building the docker container (github repository)
2022-03-29 12:01:31.834492+00:00
https://jupyterlab.readthedocs.io/en/stable/
2022-03-28 14:14:45.648769+00:00
2022-03-29 18:08:02.576584+00:00
Link to the online JupyterLab documentation.
JupyterLab Documentation
2022-03-28 14:14:45.648769+00:00
University of Freiburg, Freiburg (Germany)
bjoern.gruening@gmail.com
Björn Grüning
0000-0002-3079-6586
https://quay.io/repository/nordicesmhub/docker-climate-notebook
2022-03-29 11:58:28.213223+00:00
2022-03-29 18:08:06.281346+00:00
These docker images (different tags) correspond to the docker images built for Galaxy Climate JupyterLab.
The docker images can be used within Galaxy and as standalone docker images.
You can use the same images we use in Galaxy on your local computer or any other platform:
1. Pull an existing image locally
docker pull quay.io/nordicesmhub/docker-climate-notebook
2. Run a pre-build image from docker registry
3. To start your JupyterLab:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook
and you will top open a new terminal and start your favorite web browser.
your running Jupyter Notebook instance on http://localhost:7777/ipython/.
Remark: for reproducibility purpose, we suggest you use a specific tag e.g.
docker pull quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
Then use the same tag when starting your JupyterLab application:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-climate-notebook:2021-03-18
Docker images for Galaxy Climate JupyterLab (Quay Container Registry)
2022-03-29 11:58:28.213223+00:00
https://raw.githubusercontent.com/NordicESMhub/docker-climate-notebook/ie2/climate-jupyter-galaxy_web.gif
2022-03-29 11:41:30.552728+00:00
2022-03-29 18:08:02.662870+00:00
This is a gif animated image showing how to start the Galaxy Climate JupyterLab in Galaxy Europe
image/gif
How to start Galaxy Climate JupyterLab (gif animated)
2022-03-29 11:41:30.552728+00:00
https://raw.githubusercontent.com/NordicESMhub/docker-climate-notebook/ie2/map_vis_Galaxy.gif
2022-03-29 11:43:11.075459+00:00
2022-03-29 18:08:03.597880+00:00
This is a gif animated image showing some of the functionalities of the Galaxy Climate JupyterLab
image/gif
Demo of some of the functionalities of the Galaxy Climate JupyterLab (gif animated)
2022-03-29 11:43:11.075459+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
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EOSC-Nordic
EOSC-Nordic
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2022-03-29 18:08:11.857053+00:00
30283
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2022-03-26 09:45:54.364171+00:00
2025-10-18 11:54:14.993216+00:00
2022-03-26 09:45:54.364171+00:00
🐳 🔬 📚 Jupyter running in a docker container. This image can be used to integrate Jupyter into Galaxy. This Jupyter Docker container is used by the Galaxy Project and can be installed from the quay.io index (https://quay.io/repository/nordicesmhub/docker-climate-notebook).
application/ld+json
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cesm
climate
docker
esmvaltool
jupyterlab
pangeo
Docker Climate Analysis Jupyter Container - snapshot
Docker Climate Analysis Jupyter Container Version 2021-03-18
MANUAL
Anne Foilloux, and Björn Grüning. "Docker Climate Analysis Jupyter Container Version 2021-03-18." ROHub. Mar 26 ,2022. https://doi.org/10.24424/6mwg-cq92.
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2022-03-29 12:08:38.781608+00:00
2022-03-29 18:08:11.623739+00:00
Default Jupyter Notebook used when starting Galaxy Climate JupyterLab if no other Jupyter Notebook is passed by the user.
Default Jupyter Notebook for Galaxy Climate JupyterLab
2022-03-29 12:08:38.781608+00:00
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2022-03-29 12:06:48.073820+00:00
2022-03-29 18:08:09.556008+00:00
This is the Galaxy Climate JupyterLab tool wrapper used by Galaxy to start the Galaxy Climate JupyterLab on a Galaxy instance.
application/xml
Galaxy Climate JupyterLab Tool wrapper (xml)
2022-03-29 12:06:48.073820+00:00
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2022-03-29 12:16:49.457762+00:00
2022-03-29 18:08:08.669861+00:00
Most of the resources and information of this Research Object were created from this Jupyter Notebook.
Jupyter Notebook used to create/update this Research Object
2022-03-29 12:16:49.457762+00:00
y. This Jupyter Docker container is used by the Galaxy Project and can be installed from the quay.io index (https://quay.io/repository/nordicesmhub/docker-climate-notebo
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Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
service-account-enrichment
Applied sciences
Climatology
https://doi.org/10.5281/zenodo.5805953
2022-03-30 16:52:19.796786+00:00
2022-03-30 16:52:38.338353+00:00
Dataset used in the Galaxy Pangeo tutorials on Xarray.
Data is in netCDF format and is from Copernicus Air Monitoring Service and more precisely PM2.5 (Particle Matter < 2.5 μm) 4 days forecast from December, 22 2021. This dataset is very small and there is no need to parallelize our data analysis. Parallel data analysis with Pangeo is not covered in this tutorial and will make use of another dataset.
netCDF input file PM2.5 4 days forecast from December, 22 2020
2022-03-30 16:52:19.796786+00:00
https://doi.org/10.5281/zenodo.6399102
2022-03-29 17:55:05.034625+00:00
2022-03-30 17:17:17.151947+00:00
This is a tarball for the Docker Galaxy pangeo-JupyterLab image - Version 1c0f66b.
To use it:
download the image file docker-pangeo-notebook-1c0f66b.tar
load it with docker with the command: docker load --input docker-pangeo-notebook-1c0f66b.tar
launch the Docker container binding of your data folder (on the local machine) with the /import folder i(inside the container) with the command: docker run -v my_data_folder:/import -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
start your favorite web browser and go to: http://localhost:7777/ipython/
See https://github.com/NordicESMhub/docker-pangeo-notebook for more details
Docker Galaxy pangeo-JupyterLab image Version 1c0f66b
2022-03-29 17:55:05.034625+00:00
https://github.com/NordicESMhub/docker-pangeo-notebook
2022-03-29 12:01:31.834492+00:00
2022-03-30 16:06:06.525422+00:00
This github repository contains all the sources required for building the docker containers that are made available in Quay Container Registry.
Source code for building the docker container (github repository)
2022-03-29 12:01:31.834492+00:00
https://jupyterlab.readthedocs.io/en/stable/
2022-03-28 14:14:45.648769+00:00
2022-03-30 15:55:12.084920+00:00
Link to the online JupyterLab documentation.
JupyterLab Documentation
2022-03-28 14:14:45.648769+00:00
Anne Fouilloux
University of Freiburg, Freiburg (Germany)
bjoern.gruening@gmail.com
Björn Grüning
0000-0002-3079-6586
https://quay.io/repository/nordicesmhub/docker-pangeo-notebook
2022-03-29 11:58:28.213223+00:00
2022-03-30 16:03:33.448105+00:00
These docker images (different tags) correspond to the docker images built for Galaxy Pangeo JupyterLab.
The docker images can be used within Galaxy and as standalone docker images.
You can use the same images we use in Galaxy on your local computer or any other platform:
1. Pull an existing image locally
docker pull quay.io/nordicesmhub/docker-pangeo-notebook
2. Run a pre-build image from docker registry
3. To start your JupyterLab:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook
and you will top open a new terminal and start your favorite web browser.
your running Jupyter Notebook instance on http://localhost:7777/ipython/.
Remark: for reproducibility purpose, we suggest you use a specific tag e.g.
docker pull quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
Then use the same tag when starting your JupyterLab application:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
Docker images for Galaxy Pangeo JupyterLab (Quay Container Registry)
2022-03-29 11:58:28.213223+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
https://training.galaxyproject.org/training-material/topics/climate/tutorials/pangeo-notebook/tutorial.html
2022-03-30 15:59:56.246391+00:00
2022-03-30 15:59:56.695375+00:00
Training material (hands-on) where Pangeo Notebook is used to learn Xarray. This training is part of the Galaxy Training Network (GTN).
In this tutorial, we will learn about Xarray, one of the most used Python library from the Pangeo ecosystem.
We will be using data from Copernicus Atmosphere Monitoring Service and more precisely PM2.5 (Particle Matter < 2.5 μm) 4 days forecast from December, 22 2021. Parallel data analysis with Pangeo is not covered in this tutorial.
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Pangeo Notebook in Galaxy - Introduction to Xarray (GTN)
2022-03-30 15:59:56.246391+00:00
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2022-03-26 09:45:54.364171+00:00
This Jupyter Docker container is used by the Galaxy Project. It is based on Pangeo notebook docker image (https://github.com/pangeo-data/pangeo-docker-images) and contained a few additional packages required for Galaxy (to exchange data, etc.).
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Anne Foilloux, and Björn Grüning. "Docker for Galaxy Pangeo notebook from official Pangeo image." ROHub. Mar 26 ,2022. https://w3id.org/ro-id/9c3bfd43-7e4f-4073-8735-f280ad4ab419.
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Default Jupyter Notebook used when starting Galaxy Climate JupyterLab if no other Jupyter Notebook is passed by the user.
Default Jupyter Notebook for Galaxy Climate JupyterLab
2022-03-29 12:08:38.781608+00:00
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2022-03-30 16:45:05.654555+00:00
This is a gif animated image showing how to start the Galaxy Pangeo JupyterLab in Galaxy Europe. In this video, we pass an input file (this file will be imported in the Jupyter Notebook /import folder).
image/gif
How to start Galaxy Pangeo JupyterLab (gif animated)
2022-03-30 16:44:58.679622+00:00
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This is the Galaxy Pangeo JupyterLab tool wrapper used by Galaxy to start the Galaxy Pangeo JupyterLab on a Galaxy instance.
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Galaxy Pangeo JupyterLab Tool wrapper (xml)
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Copernicus Atmosphere Monitoring Service PM2.5, 2 day forecasts, 24th December 2021 at 12:00 UTC
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CAMS PM2.5, 2 day forecasts, 24th December 2021 at 12:00 UTC
2022-03-30 16:49:24.424570+00:00
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
2022-04-03 22:38:16.381912+00:00
Contains input Dataset for IceNet's demo notebook used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Dataset for IceNet's demo notebook
2022-04-03 22:38:16.031702+00:00
https://doi.org/10.5281/zenodo.6410246
2022-04-03 22:38:17.386248+00:00
2022-04-03 22:38:17.886319+00:00
Contains outputs, (table and figures), generated in the Jupyter notebook of Sea ice forecasting using IceNet
Outputs
2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
2022-04-03 22:38:14.669821+00:00
2022-04-03 22:38:15.064256+00:00
Contains input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning' used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning'
2022-04-03 22:38:14.669821+00:00
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Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
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Online rendered version of the Jupyter notebook
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Conda environment when user want to have the same libraries installed without concerns of package versions
Conda environment
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Jupyter Notebook hosted by the Environmental Data Science Book
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The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book.
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Alejandro Coca-Castro, Tom Andersson, and Nick Barlow. "Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Apr 03 ,2022. https://w3id.org/ro-id/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef.
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Image showing interactive plot of IceNet seasonal forecasts of Artic sea ice according to four lead times and months in 2020
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Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
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Jupyter Notebook for running the VSM code with geodetic data
Notebook with the modelling by VSM
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https://datahub.egi.eu/share/061f00e904101f2062a6e54f99c76278ch444d
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Models generated by VSM during the search
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VSM input file
VSM input file
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GNSS data from 2011-2012 at Santorini (Greece)
GNSS data
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Parameters vs sampling
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https://datahub.egi.eu/share/7660c9472d9f85542bf1d20d57232d5dch09f6
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1D2D statistics plot
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https://datahub.egi.eu/share/8d4964fa04786ebdb7c220ccb65b4be8chaf0f
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Synthetic SAR data
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Synthetic GNSS data
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1D statistics
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https://datahub.egi.eu/share/dfdc97a96d6bc5322167aca4449a71d1ch6a9a
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Subsampled descending ENVISAT data from 2011-2012 at Santorini (Greece)
InSAR data
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https://doi.org/10.24424/t83f-5t97
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Research Object containing the details on the VSM Python tool
VSM tool - RO
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Istituto Nazionale di Geofisica e Vulcanologia
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2022-04-07 14:19:39.168772+00:00
This Research Object contains results from the run of the VSM code, related to the modelling of the inflation phase at Santorni during 2011-2012. The forward model is a spheroidal source arbitrary oriented in space. Input data are InSAR and GNSS data. This RO has been created using the Reliance services.
application/ld+json
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Volcano
deformation
Jupyter Notebook
Modelling of the 2011-2012 inflation at Santorini (Greece) detected by remote sensing and GPS data
MANUAL
Michael Foumelis, and Elisa Trasatti. "Modelling of the 2011-2012 inflation at Santorini (Greece) detected by remote sensing and GPS data." ROHub. Apr 07 ,2022. https://w3id.org/ro-id/a25c47c7-f4dd-44d2-be2c-ab74b6a99070.
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biblio
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Data - Model - Residuals with InSAR descending data
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Data - Model - Residuals with InSAR descending data
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VSM code - Research Object
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Modelling of the 2011-2012 inflation at Santorini (Greece) detected by remote sensing and GPS data.
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This Research Object contains results from the run of the VSM code, related to the modelling of the inflation phase at Santorni during 2011-2012.
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Greece
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atmospheric sciences
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software
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results from the run
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Jupyter Notebook for running the VSM code with geodetic data
Notebook with the modelling by VSM
2022-04-07 16:58:35.637439+00:00
https://datahub.egi.eu/share/024963fef4709843cef70c2840c4c80cch5405
2022-04-07 17:00:23.321658+00:00
2022-04-07 17:00:23.684218+00:00
Synthetic GNSS data
2022-04-07 17:00:23.321658+00:00
https://datahub.egi.eu/share/08129f021c9fdd6c2782973caf9f95ffchd0f1
2022-04-07 16:59:53.305500+00:00
2022-04-07 16:59:53.879572+00:00
Synthetic SAR data - Cosmo-Skymed descending orbit
2022-04-07 16:59:53.305500+00:00
https://datahub.egi.eu/share/0b6279fa7195700776f186afeadd96aach2fc4
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2022-04-07 16:58:55.302021+00:00
Models generated by VSM during the search
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https://datahub.egi.eu/share/274d9f811ea5787d910c8f47de9a3dbech42e3
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2022-04-07 16:58:46.794376+00:00
Parameters vs sampling
2022-04-07 16:58:46.471801+00:00
https://datahub.egi.eu/share/2cccc92db1ff1a1cb90e6ad97f80df37ch6937
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2022-04-07 16:58:53.475972+00:00
2D statistics
2022-04-07 16:58:53.247385+00:00
https://datahub.egi.eu/share/426b7f67a573ef34b110940437ed4ac9chbc69
2022-04-07 16:58:28.322060+00:00
2022-04-07 16:58:28.666438+00:00
VSM input file
VSM input file
2022-04-07 16:58:28.322060+00:00
https://datahub.egi.eu/share/6740d7b8d834b1b25cf6117a2adea845ch3b24
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2022-04-07 16:58:51.089068+00:00
1D2D statistics plot
2022-04-07 16:58:50.856789+00:00
https://datahub.egi.eu/share/8988693c09e1d7207a952d39e3a70b23ch8dbe
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2022-04-07 16:57:41.692163+00:00
Subsampled descending orbit Cosmo-Skymed data of the Van earthquake
InSAR data - Cosmo Skymed descending orbit
2022-04-07 16:57:41.334870+00:00
https://datahub.egi.eu/share/8a2d27826ee34eacaad638db6a5ff353cha553
2022-04-07 17:00:17.480634+00:00
2022-04-07 17:00:17.789098+00:00
Synthetic SAR data - ENVISAT descending orbit
2022-04-07 17:00:17.480634+00:00
https://datahub.egi.eu/share/980e8441348fd986f8f503148ea16838ch4b74
2022-04-07 16:56:18.637163+00:00
2022-04-07 16:56:19.004145+00:00
Subsampled azimuth direction Cosmo-Skymed data of the Van earthquake
InSAR data - Cosmo Skymed azimuth displacements
2022-04-07 16:56:18.637163+00:00
https://datahub.egi.eu/share/ac4452cb8bc8b1dc987d83bd6939a246ch553a
2022-04-07 16:58:25.005904+00:00
2022-04-07 16:58:25.321506+00:00
GNSS data of the Van earthquake
GNSS data
2022-04-07 16:58:25.005904+00:00
https://datahub.egi.eu/share/c6c4bc4e622ceb1cacee0b378e455338ch9b36
2022-04-07 16:58:07.473755+00:00
2022-04-07 16:58:07.809047+00:00
Subsampled descending orbit ENVISAR data of the Van earthquake
InSAR data - ENVISAT descending orbit
2022-04-07 16:58:07.473755+00:00
https://datahub.egi.eu/share/f0323e4ee868f32962241161494d4634chb633
2022-04-07 16:59:19.226938+00:00
2022-04-07 16:59:19.422965+00:00
Synthetic SAR data - Cosmo-Skymed azimuth direction
2022-04-07 16:59:19.226938+00:00
https://datahub.egi.eu/share/f86907a9990b5f73ff993092072ded18ch8dc9
2022-04-07 16:58:48.957832+00:00
2022-04-07 16:58:49.246350+00:00
1D statistics
2022-04-07 16:58:48.957832+00:00
INGV
cristiano.tolomei@ingv.it
Tolomei, Cristiano
0000-0001-7378-0712
Elisa Trasatti
https://pubs.geoscienceworld.org/ssa/bssa/article-abstract/75/4/1135/118782/Surface-deformation-due-to-shear-and-tensile?redirectedFrom=fulltext
2022-04-08 13:41:09.800483+00:00
2022-04-08 13:41:13.065031+00:00
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2022-04-07 16:47:13.793671+00:00
This Research Object has been created using the Reliance services. It aggregates results from the VSM run, related to the modelling of the coseismic deformation due to the Van earthquake (Turkey) of 23 October 2011. The geodetic dataset consists of InSAR slant and azimuth range measurements from COSMO-Skymed satellite, descending orbit ENVISAT data, and GNSS data. The forward model used is Okada (1985).
application/ld+json
https://w3id.org/ro-id/51daf908-532a-4e36-b7fc-9902de63f694
earthquake
fault modelling
geodetic data
seismic cycle
Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data
MANUAL
Trasatti, Elisa, and Tolomei, Cristiano. "Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data." ROHub. Apr 07 ,2022. https://w3id.org/ro-id/51daf908-532a-4e36-b7fc-9902de63f694.
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output
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Data - Model - Residuals with InSAR azimuth direction
image/png
Data - Model - Residuals with InSAR azimuth direction
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Logo of VSM in Reliance
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Data - Model - Residuals with InSAR descending data
image/png
Data - Model - Residuals with InSAR descending data
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Best-fit values of the source
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Log of the run
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66144
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Data - Model - Residuals with InSAR ENVISAT descending orbit
image/png
Data - Model - Residuals with InSAR ENVISAT descending orbit
2022-04-07 17:02:55.597886+00:00
2022-04-08 13:52:09.446343+00:00
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VSM code - Research Object
VSM code - Research Object
2022-04-07 17:04:41.544818+00:00
It aggregates results from the VSM run, related to the modelling of the coseismic deformation due to the Van earthquake (Turkey) of 23 October 2011.
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Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data.
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2022-04-07 16:50:29.530172+00:00
Deformation and Related Slip Due to the 2011 Van Earthquake (Turkey) Sequence Imaged by SAR Data and Numerical Modeling - by E. Trasatti, C. Tolomei, G. Pezzo, S. Atzori, S. Salvi Rem. Sens., 2016. https://doi.org/10.3390/rs8060532
Deformation and Related Slip Due to the 2011 Van Earthquake (Turkey) Sequence Imaged by SAR Data and Numerical Modeling
2022-04-07 16:50:28.997286+00:00
Raul Palma
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
INGV
cristiano.tolomei@ingv.it
Tolomei, Cristiano
0000-0001-7378-0712
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
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This Research Object has been created using the Reliance services. It aggregates results from the VSM run, related to the modelling of the coseismic deformation due to the Van earthquake (Turkey) of 23 October 2011. The geodetic dataset consists of InSAR slant and azimuth range measurements from COSMO-Skymed satellite, descending orbit ENVISAT data, and GNSS data. The forward model used is Okada (1985).
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fault modelling
geodetic data
seismic cycle
Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data - archive
Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data
MANUAL
Turkey
Van
azimuth
dataset
datum
earthquake
measure
orbit
reliance
remote sensing
service
earth sciences
Athletics, track and field
Earthquake
Geology
IT-computer sciences
GPS data
Research Object
Turkey
dataset
datum
earthquake
measurement
geosciences
Van earthquake
azimuth range measurement
geodetic dataset
orbit ENVISAT datum
reliance service
It aggregates results from the VSM run, related to the modelling of the coseismic deformation due to the Van earthquake (Turkey) of 23 October 2011.
Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data.
The geodetic dataset consists of InSAR slant and azimuth range measurements from COSMO-Skymed satellite, descending orbit ENVISAT data, and GNSS data.
1985
of Oct-23-2011
the 2011
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database
Turkey
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Trasatti, Elisa, and Tolomei, Cristiano. "Modelling of the 2011 Van Earthquake (Turkey) of Magnitude 7.1 from remote sensing and GPS data." ROHub. Apr 07 ,2022. https://doi.org/10.24424/dxfh-x940.
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1D2D statistics plot
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2022-04-07 17:00:23.321658+00:00
2022-04-08 13:51:59.910753+00:00
Synthetic GNSS data
2022-04-07 17:00:23.321658+00:00
https://datahub.egi.eu/share/2cccc92db1ff1a1cb90e6ad97f80df37ch6937
2022-04-07 16:58:53.247385+00:00
2022-04-08 13:52:08.082692+00:00
2D statistics
2022-04-07 16:58:53.247385+00:00
https://datahub.egi.eu/share/f0323e4ee868f32962241161494d4634chb633
2022-04-07 16:59:19.226938+00:00
2022-04-08 13:52:00.823714+00:00
Synthetic SAR data - Cosmo-Skymed azimuth direction
2022-04-07 16:59:19.226938+00:00
179
https://api.rohub.org/api/resources/22013e8c-a5c3-4d27-9d20-76be2ac62fff/download/
2022-04-07 16:58:56.994221+00:00
2022-04-08 13:51:57.282828+00:00
text/csv
Best-fit values of the source
2022-04-07 16:58:56.994221+00:00
https://datahub.egi.eu/share/980e8441348fd986f8f503148ea16838ch4b74
2022-04-07 16:56:18.637163+00:00
2022-04-08 13:52:03.833043+00:00
Subsampled azimuth direction Cosmo-Skymed data of the Van earthquake
InSAR data - Cosmo Skymed azimuth displacements
2022-04-07 16:56:18.637163+00:00
https://datahub.egi.eu/share/8a2d27826ee34eacaad638db6a5ff353cha553
2022-04-07 17:00:17.480634+00:00
2022-04-08 13:51:45.109683+00:00
Synthetic SAR data - ENVISAT descending orbit
2022-04-07 17:00:17.480634+00:00
16805
https://api.rohub.org/api/resources/59a5f153-7c69-45c3-8484-41b0afc288c7/download/
2022-04-07 16:50:33.205752+00:00
2022-04-08 13:52:01.944940+00:00
image/gif
Logo of VSM in Reliance
2022-04-07 16:50:33.205752+00:00
https://datahub.egi.eu/share/426b7f67a573ef34b110940437ed4ac9chbc69
2022-04-07 16:58:28.322060+00:00
2022-04-08 13:52:08.413387+00:00
VSM input file
VSM input file
2022-04-07 16:58:28.322060+00:00
https://pubs.geoscienceworld.org/ssa/bssa/article-abstract/75/4/1135/118782/Surface-deformation-due-to-shear-and-tensile?redirectedFrom=fulltext
2022-04-08 13:41:09.800483+00:00
2022-04-08 13:51:49.685325+00:00
Okada (1985) paper
2022-04-08 13:41:09.800483+00:00
https://datahub.egi.eu/share/ac4452cb8bc8b1dc987d83bd6939a246ch553a
2022-04-07 16:58:25.005904+00:00
2022-04-08 13:52:00.213810+00:00
GNSS data of the Van earthquake
GNSS data
2022-04-07 16:58:25.005904+00:00
139163
https://api.rohub.org/api/resources/691406e2-ec05-4cda-b974-c345a4b2c2bb/download/
2022-04-07 17:02:31.138908+00:00
2022-04-08 13:51:40.951945+00:00
Data - Model - Residuals with InSAR azimuth direction
image/png
Data - Model - Residuals with InSAR azimuth direction
2022-04-07 17:02:31.138908+00:00
https://datahub.egi.eu/share/f86907a9990b5f73ff993092072ded18ch8dc9
2022-04-07 16:58:48.957832+00:00
2022-04-08 13:52:02.577308+00:00
1D statistics
2022-04-07 16:58:48.957832+00:00
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007ED547736861726547756964233636636663636263393839363438393231643732613364633038373431383935636866613633233732356634616233366362323664306662666330633132346337373565666565636865653439233463633635336234326364616162333330366139666564376136626365643563636863663330/content
2022-04-07 16:58:35.637439+00:00
2023-05-16 18:04:53.537869+00:00
Jupyter Notebook for running the VSM code with geodetic data
Notebook with the modelling by VSM
2022-04-07 16:58:35.637439+00:00
https://datahub.egi.eu/share/c6c4bc4e622ceb1cacee0b378e455338ch9b36
2022-04-07 16:58:07.473755+00:00
2022-04-08 13:51:14.712013+00:00
Subsampled descending orbit ENVISAR data of the Van earthquake
InSAR data - ENVISAT descending orbit
2022-04-07 16:58:07.473755+00:00
https://datahub.egi.eu/share/8988693c09e1d7207a952d39e3a70b23ch8dbe
2022-04-07 16:57:41.334870+00:00
2022-04-08 13:51:52.275813+00:00
Subsampled descending orbit Cosmo-Skymed data of the Van earthquake
InSAR data - Cosmo Skymed descending orbit
2022-04-07 16:57:41.334870+00:00
142128
https://api.rohub.org/api/resources/9ca4b563-9c60-461c-969d-0424189b6c98/download/
2022-04-07 16:48:55.771391+00:00
2022-04-08 13:51:51.502733+00:00
Data - Model - Residuals with InSAR descending data
image/png
Data - Model - Residuals with InSAR descending data
2022-04-07 16:48:55.771391+00:00
https://datahub.egi.eu/share/274d9f811ea5787d910c8f47de9a3dbech42e3
2022-04-07 16:58:46.471801+00:00
2022-04-08 13:51:37.377179+00:00
Parameters vs sampling
2022-04-07 16:58:46.471801+00:00
https://w3id.org/ro-id/bf3d5a76-1be0-4221-8ee0-b3cb40faf6f7
2022-04-07 17:04:41.544818+00:00
2022-04-08 13:51:53.275503+00:00
VSM code - Research Object
VSM code - Research Object
2022-04-07 17:04:41.544818+00:00
https://www.mdpi.com/2072-4292/8/6/532
2022-04-07 16:50:28.997286+00:00
2022-04-08 13:52:07.126110+00:00
Deformation and Related Slip Due to the 2011 Van Earthquake (Turkey) Sequence Imaged by SAR Data and Numerical Modeling - by E. Trasatti, C. Tolomei, G. Pezzo, S. Atzori, S. Salvi Rem. Sens., 2016. https://doi.org/10.3390/rs8060532
Deformation and Related Slip Due to the 2011 Van Earthquake (Turkey) Sequence Imaged by SAR Data and Numerical Modeling
2022-04-07 16:50:28.997286+00:00
https://datahub.egi.eu/share/0b6279fa7195700776f186afeadd96aach2fc4
2022-04-07 16:58:55.111044+00:00
2022-04-08 13:52:05.264138+00:00
Models generated by VSM during the search
2022-04-07 16:58:55.111044+00:00
66144
https://api.rohub.org/api/resources/d6fd480f-eef3-427a-895e-871d7b4e5a48/download/
2022-04-07 17:02:55.597886+00:00
2022-04-08 13:51:59.607697+00:00
Data - Model - Residuals with InSAR ENVISAT descending orbit
image/png
Data - Model - Residuals with InSAR ENVISAT descending orbit
2022-04-07 17:02:55.597886+00:00
https://datahub.egi.eu/share/08129f021c9fdd6c2782973caf9f95ffchd0f1
2022-04-07 16:59:53.305500+00:00
2022-04-08 13:52:06.880847+00:00
Synthetic SAR data - Cosmo-Skymed descending orbit
2022-04-07 16:59:53.305500+00:00
Raul Palma
Earth sciences
Climate Change Centre Austria, Vienna (Austria)
matthias.schwarz@ccca.ac.at
Matthias Schwarz
0000-0002-0043-3522
01xtthb56
University of Oslo
339b4361-2df7-4c7b-9413-12b7dc7653c2
POLYGON ((-180 -90, 180 -90, 180 90, -180 90, -180 -90))
POLYGON ((-180 -90, 180 -90, 180 90, -180 90, -180 -90))
-180 -90, 180 -90, 180 90, -180 90, -180 -90
8645587
https://api.rohub.org/api/ros/dd948b04-bfa4-44b0-814b-19f7daff6b8c/crate/download/
2022-04-27 19:51:22.717733+00:00
2025-10-18 11:43:51.375779+00:00
2022-04-27 19:51:22.717733+00:00
The aerosol-cloud interaction has been much explored in recent studies because of its high uncertain contribution to the anthropogenic forcing of climate change. The high uncertainty relies on the high difficulty in understanding the multiple processes and players involved, related to the non-linearity between the change in aerosols and multiple cloud properties. Earth system models are an indispensable tool to predict the future climate. They are process-based models, and they are directly affected by the uncertainty in the understanding of the aerosol-cloud dynamics. The present work investigates the ability of the CMIP6 models to reproduce the relationship between the cloud droplet number concentration (CDNC) and the aerosol optical depth (AOD), taken as a proxy of the number of aerosols (or CCN, cloud condensation nuclei). First a comparison between the modelled and observed AOD (data was not available for CDNC) was conducted to individuate the best performance within the models in reproducing this variable. The observational data were from MODIS data and the comparison was done on the climatological mean over the 2000-2014 period. Using different statistical parameters, a ranking was produced and the model GFDL-ESM4 resulted to better perform over the other models. Afterwards, in order to account for the non-linearity of the process, joint histogram have been used to reproduce the relationship between AOD and CDNC. The objective was to compare the modelled results on a global and local scale with the MODIS data from the study Gryspeerdt et al 2016, in order to see if the model could capture the complex relationship. The different time resolution didn’t allow to proceed to a direct comparison of the plots, but they result to be compatible, leading to the conclusion that GFDL-ESM4 model is able to well reproduce this interaction. The importance of separating the analysis into the liquid water content and the ice content is also appreciated, which is even more evident in regional analysis. Further investigations are needed to better compare and quantify the performance of the CMIP6 models in reproducing the observed aerosol-cloud interaction.
application/ld+json
https://w3id.org/ro-id/dd948b04-bfa4-44b0-814b-19f7daff6b8c
aerosol
cloud
cmip6
modis
Jupyter Notebook
OCTOPUS project - explOring aerosol-Cloud inTeractiOns in CMIP6 models Using joint-histogramS
MANUAL
Adele Zaini, and Matthias Schwarz. "OCTOPUS project - explOring aerosol-Cloud inTeractiOns in CMIP6 models Using joint-histogramS." ROHub. Apr 27 ,2022. https://w3id.org/ro-id/dd948b04-bfa4-44b0-814b-19f7daff6b8c.
POLYGON ((-180 -90, 180 -90, 180 90, -180 90, -180 -90))
output
input
tool
biblio
56439
https://api.rohub.org/api/resources/399b0eb3-2277-43bb-9a94-220f97f925c3/download/
2022-04-27 20:09:36.263904+00:00
2022-04-27 20:09:40.261457+00:00
This Jupyter notebook has been used to generate the Research Object and also to update it e.g. add all the internal and external resources used and generated during the eScience course.
Jupyter Notebook for creating RO and aggregating all the resources used/generated
2022-04-27 20:09:36.263904+00:00
556001
https://api.rohub.org/api/resources/49da3cdc-b072-443d-bf26-f1c19824933d/download/
2022-05-20 08:18:34.743656+00:00
2022-05-20 08:18:39.112677+00:00
Overview of the study areas using data from GFDL-ESM4 climatological mean (2000 - 2014) of AOD at 550 nm.
image/png
Overview of the study areas
2022-05-20 08:18:34.743656+00:00
3285925
https://api.rohub.org/api/resources/4b685a29-a30d-4f28-a44b-e9c8f3af802b/download/
2022-04-27 20:02:34.161725+00:00
2022-04-27 20:02:38.502133+00:00
This is the final report written for the FORCeS eScience course 'Tools in Climate Science: Linking Observations with Modelling'.
It has been built from the Jupyter Notebook and also contains the scientific discussion of the results as well as references.
application/pdf
Final Report on 'explOring aerosol-Cloud inTeractiOns in CMIP6 models Using joint-histogramS'
2022-04-27 20:02:34.161725+00:00
4941701
https://api.rohub.org/api/resources/5246cbe0-36cf-45ce-a0bc-8b26b5a4850e/download/
2022-04-27 20:00:37.934740+00:00
2022-05-20 08:29:13.469096+00:00
This jupyter notebook support the report written for the FORCeS eScience course 'Tools in Climate Science: Linking Observations with Modelling'
Jupyter Notebook for explOring aerosol-Cloud inTeractiOns in CMIP6 models Using joint-histogramS.
2022-04-27 20:00:37.934740+00:00
97335
https://api.rohub.org/api/resources/d7763e55-e8e7-41b6-ac27-ca3483458b94/download/
2022-05-20 08:24:00.395613+00:00
2022-05-20 08:27:27.772700+00:00
Plotting of statistical analysis of the comparison between CMIP6 models and MODIS observations.
image/png
Statistical analysis of the comparison CMIP6-MODIS
2022-05-20 08:24:00.395613+00:00
551064
https://api.rohub.org/api/resources/e1c47b1b-1e9b-4d0c-b738-d7829c50bfad/download/
2022-05-20 08:14:37.188724+00:00
2022-05-20 08:15:30.323686+00:00
Overview of the AOD data with a) MODIS: Climatological mean (2000-2014) of AOD; b) KACE-1-0-G: climatological mean (2000-2014) of AOD.
image/png
Overview of the AOD data
2022-05-20 08:14:37.188724+00:00
559
https://api.rohub.org/api/resources/ecb6ef8b-761c-4615-ac37-98ae2ee4728b/download/
2022-04-27 20:05:37.626912+00:00
2022-04-27 20:05:41.472675+00:00
This GeoJSON file shows the entire globe e.g. the analysis has been done on a global scale.
GeoJSON for the entire world
2022-04-27 20:05:37.626912+00:00
553089
https://api.rohub.org/api/resources/f150366f-6033-41cb-af49-152d9536cd9c/download/
2022-05-20 08:22:29.285147+00:00
2022-05-20 08:26:38.476590+00:00
Plotting of the joint histograms figures for different regions and models.
image/png
Joint histograms AOD-CDNC of 'GFDL-ESM4' model
2022-05-20 08:22:29.285147+00:00
32280
https://api.rohub.org/api/resources/fa18d64a-8e93-44aa-8d58-233b00078b15/download/
2022-04-27 20:01:11.273827+00:00
2022-04-27 20:01:15.335170+00:00
This is a Python script where all the functions used in the Jupyter Notebook were gathered.
This Python script needs to be downloaded with the Jupyter Notebook and must be in the same folder than the Jupyter Notebook itself.
text/x-python
Python script containing all the functions used in the Jupyter Notebook
2022-04-27 20:01:11.273827+00:00
2016
dynamics
7.969639468690703
4.2
earth sciences
100.0
0.9981259703636169
atmospheric sciences
100.0
0.9981259703636169
physics
73.52941176470588
7.5
aerosol-cloud interaction
14.908256880733944
6.5
cloud property
17.906976744186046
7.7
operation
7.969639468690703
4.2
aerosol-cloud dynamics
31.3953488372093
13.5
aerosol
11.926605504587156
5.2
data
11.57495256166983
6.1
investigation
7.400379506641367
3.9
The aerosol-cloud interaction has been much explored in recent studies because of its high uncertain contribution to the anthropogenic forcing of climate change.
34.550561797752806
12.3
cloud
16.513761467889907
7.2
Climate change
Environment/Climate change
over the 2000-2014 period
MODIS data
12.55813953488372
5.4
interaction
15.37001897533207
8.1
GFDL-ESM4
13.073394495412844
5.7
They are process-based models, and they are directly affected by the uncertainty in the understanding of the aerosol-cloud dynamics.
28.089887640449437
10.0
cloud
17.4573055028463
9.2
meteorology
26.47058823529412
2.7
CMIP6
15.137614678899082
6.6
OCTOPUS project - explOring aerosol-Cloud inTeractiOns in CMIP6 models Using joint-histogramS.
37.359550561797754
13.3
exploring aerosol-cloud interaction
24.651162790697676
10.6
aerosol
22.011385199240987
11.6
Weather
Weather
cloud condensation nucleus
13.488372093023257
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geosciences
100.0
0.5867840647697449
interaction
15.36697247706422
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meteorology and climatology
100.0
0.5867840647697449
aerosol optical depth
13.073394495412844
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Science and technology
Science and technology
information
10.246679316888047
5.4
Department of Geosciences, University of Oslo (Norway)
adelez@student.matnat.uio.no
Adele Zaini
admin NordicESMHub
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007E8FDC736861726547756964236361656261326133613536366231366533363638303031653865323334326665636833343036233732356634616233366362323664306662666330633132346337373565666565636865653439236339613764623439633034663665373333343237356161323766613434323763636830393237/content
2022-04-29 14:58:51.762712+00:00
2022-06-10 20:17:15.198184+00:00
Jupyter Notebook for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
Jupyter Notebook of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Germany and variable Particulate matter < 10 µm
2022-04-29 14:58:51.762712+00:00
https://datahub.egi.eu/share/17f83ad80b8994f3435c8e24d33023b7che032
2022-04-29 14:58:08.006253+00:00
2022-04-29 14:58:08.385071+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2021
Data-Cube from ADAM platform over Germany in September 2021
2022-04-29 14:58:08.006253+00:00
https://datahub.egi.eu/share/5f63ea1c3854ead77c13a17c0f712ddech42bb
2022-04-29 14:59:07.286456+00:00
2022-04-29 14:59:07.652015+00:00
Monthly average maps of CAMS Particulate matter < 10 µm [µg m-3] over Germany in 2019, 2020 and 2021
Particulate matter < 10 µm [µg m-3] over Germany for September 2019, 2020 and 2021
2022-04-29 14:59:07.286456+00:00
https://datahub.egi.eu/share/608cee9653bb1a113cbcfcb666662788ch3928
2022-04-29 14:59:38.484953+00:00
2022-04-29 14:59:38.870050+00:00
Daily average of CAMS Particulate matter < 10 µmµg m-3] over Düsseldorf in September 2021
Timeseries of Particulate matter < 10 µm [µg m-3] over Düsseldorf in september 2021
2022-04-29 14:59:38.484953+00:00
https://datahub.egi.eu/share/6785ea47d138ef526f5f58321d849676ch4eeb
2022-04-29 14:58:03.529232+00:00
2022-04-29 14:58:03.910063+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2019
Data-Cube from ADAM platform over Germany in September 2019
2022-04-29 14:58:03.529232+00:00
https://datahub.egi.eu/share/77fa7903d73b67f7262c7312a9c92cd5ch1386
2022-04-29 14:59:52.132495+00:00
2022-04-29 14:59:52.521179+00:00
netCDF data corresponding to daily average of CAMS Particulate matter < 10 µm [µg m-3] over Germany for September 2019, September 2020 and September 2021
netCDF data for daily PM10over Germany in September 2019, 2020 and 2021
2022-04-29 14:59:52.132495+00:00
https://datahub.egi.eu/share/9272d9f87eda07caf8cd2d089a68b812ch5a34
2022-04-29 14:58:05.739000+00:00
2022-04-29 14:58:06.224395+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2020
Data-Cube from ADAM platform over Germany in September 2020
2022-04-29 14:58:05.739000+00:00
https://datahub.egi.eu/share/9d583c3078d449166832b905499bd00echa70c
2022-04-29 14:59:31.260537+00:00
2022-04-29 14:59:31.677956+00:00
Daily average maps of CAMS Particulate matter < 10 µmµg m-3] over Germany on September 15, 2021
Particulate matter < 10 µm [µg m-3] over Germany on September 15, 2021
2022-04-29 14:59:31.260537+00:00
https://datahub.egi.eu/share/f17678673167e4963be6cfe6258b857ach37b8
2022-04-29 14:57:45.729760+00:00
2022-04-29 14:57:46.132284+00:00
Geojson file used for retrieving data from the ADAM platform over Germany
Geojson for Germany
2022-04-29 14:57:45.729760+00:00
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
bbeaba09-2cc8-4df4-a08d-78e21da1ad5a
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191336
https://api.rohub.org/api/ros/0583f2dd-d42a-4f20-9104-519d587cb30e/crate/download/
2022-04-29 14:55:19.274708+00:00
2025-10-18 11:43:45.996498+00:00
2022-04-29 14:55:19.274708+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of PM10 over a given geographical area, here Germany
application/ld+json
https://w3id.org/ro-id/0583f2dd-d42a-4f20-9104-519d587cb30e
CAMS
Germany
PM10
air quality
copernicus
jupyter-notebook
Jupyter Notebook
PM10 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, and Jean Iaquinta. "PM10 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. Apr 29 ,2022. https://w3id.org/ro-id/0583f2dd-d42a-4f20-9104-519d587cb30e.
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biblio
tool
output
input
136498
https://api.rohub.org/api/resources/c8960e21-be3f-4511-960c-038e09517a5a/download/
2022-04-29 14:57:04.759012+00:00
2022-04-29 14:57:08.532327+00:00
Monthly average maps of CAMS Particulate matter < 10 µm [µg m-3] over Germany in 2019, 2020 and 2021
image/png
Particulate matter < 10 µm [µg m-3] over Germany for September 2019, 2020 and 2021
2022-04-29 14:57:04.759012+00:00
Germany Jupyter notebook
7.367149758454106
6.1
usage of cam
7.971014492753623
6.6
analysis from Copernicus Atmosphere Monitoring
31.40096618357488
26.0
area
6.690140845070423
3.8
geosciences
100.0
0.5820832848548889
earth sciences
100.0
0.9861456751823425
usage
7.746478873239438
4.4
atmospheric sciences
100.0
0.9861456751823425
Research Object
14.552736982643523
10.9
Copernicus Atmosphere Monitoring
15.48731642189586
11.6
reliance
11.443661971830986
6.5
earth resources and remote sensing
100.0
0.5820832848548889
map
9.212283044058744
6.9
PM10
14.018691588785046
10.5
PM10 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services.
44.04404404404404
44.0
service
6.690140845070423
3.8
map
11.091549295774648
6.3
air quality
27.816901408450704
15.8
Germany
9.859154929577466
5.6
analysis
14.686248331108143
11.0
cam
9.078771695594124
6.8
air quality analysis
39.371980676328505
32.6
Air pollution
Environment/Environmental pollution/Air pollution
air quality
22.96395193591455
17.2
reliance service
13.88888888888889
11.5
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of PM10 over a given geographical area, here Germany
55.95595595595595
55.9
analysis
18.661971830985916
10.6
Germany
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007EE3C5736861726547756964233765303939613265356266646534336234323865313536323765623331313631636830633131233732356634616233366362323664306662666330633132346337373565666565636865653439236537646230333631396464343430616362643762623737333035666139353930636837366464/content
2022-04-29 18:37:53.769233+00:00
2022-06-10 20:15:42.990829+00:00
Jupyter Notebook for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
Jupyter Notebook of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Germany and variable Nitrogen Dioxide
2022-04-29 18:37:53.769233+00:00
https://datahub.egi.eu/share/2cd0ce095d1600326cb0b79aa2711bb4ch3919
2022-04-29 18:37:44.209939+00:00
2022-04-29 18:37:44.558465+00:00
Geojson file used for retrieving data from the ADAM platform over Germany
Geojson for Germany
2022-04-29 18:37:44.209939+00:00
https://datahub.egi.eu/share/31647d22887219d3f57b29b04d6eec29ch24a3
2022-04-29 18:37:50.871788+00:00
2022-04-29 18:37:51.235975+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2021
Data-Cube from ADAM platform over Germany in September 2021
2022-04-29 18:37:50.871788+00:00
https://datahub.egi.eu/share/5302252f6741f5bdb5ac72b4ae6dd826chf3c8
2022-04-29 18:38:02.562504+00:00
2022-04-29 18:38:03.196751+00:00
netCDF data corresponding to daily average of CAMS Nitrogen Dioxide [kg m-3] over Germany for September 2019, September 2020 and September 2021
netCDF data for daily NO2over Germany in September 2019, 2020 and 2021
2022-04-29 18:38:02.562504+00:00
https://datahub.egi.eu/share/c7e77d088ee3f522f123b04c14283869ch5773
2022-04-29 18:37:48.548167+00:00
2022-04-29 18:37:48.938257+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2020
Data-Cube from ADAM platform over Germany in September 2020
2022-04-29 18:37:48.548167+00:00
https://datahub.egi.eu/share/d2d2c982c6c5f023b448ef1c6127f6cdch3ab8
2022-04-29 18:37:46.204836+00:00
2022-04-29 18:37:46.578769+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Germany in September 2019
Data-Cube from ADAM platform over Germany in September 2019
2022-04-29 18:37:46.204836+00:00
https://datahub.egi.eu/share/dc6f591ad056a4bfd8e21441498b7e6ach56dc
2022-04-29 18:37:58.035639+00:00
2022-04-29 18:37:58.431400+00:00
Daily average maps of CAMS Nitrogen Dioxidekg m-3] over Germany on September 15, 2021
Nitrogen Dioxide [kg m-3] over Germany on September 15, 2021
2022-04-29 18:37:58.035639+00:00
https://datahub.egi.eu/share/e906c43da1e60413e2e4b1671601fe89ch1026
2022-04-29 18:38:00.293198+00:00
2022-04-29 18:38:00.684460+00:00
Daily average of CAMS Nitrogen Dioxidekg m-3] over Düsseldorf in September 2021
Timeseries of Nitrogen Dioxide [kg m-3] over Düsseldorf in september 2021
2022-04-29 18:38:00.293198+00:00
https://datahub.egi.eu/share/f4fec3504ccda5bcd38f549ca563175bch53eb
2022-04-29 18:37:56.003379+00:00
2022-04-29 18:37:56.382445+00:00
Monthly average maps of CAMS Nitrogen Dioxide [kg m-3] over Germany in 2019, 2020 and 2021
Nitrogen Dioxide [kg m-3] over Germany for September 2019, 2020 and 2021
2022-04-29 18:37:56.003379+00:00
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
749257b7-779e-42a2-bbf2-61e321baf525
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195061
https://api.rohub.org/api/ros/056d9dcb-cb4a-41bb-91fc-97ef3d0e8f6f/crate/download/
2022-04-29 18:30:11.293583+00:00
2025-10-18 11:43:41.114898+00:00
2022-04-29 18:30:11.293583+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Germany
application/ld+json
https://w3id.org/ro-id/056d9dcb-cb4a-41bb-91fc-97ef3d0e8f6f
CAMS
Germany
NO2
air quality
copernicus
jupyter-notebook
Jupyter Notebook
NO2 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. Apr 29 ,2022. https://w3id.org/ro-id/056d9dcb-cb4a-41bb-91fc-97ef3d0e8f6f.
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input
output
biblio
tool
140394
https://api.rohub.org/api/resources/3413ab80-9a33-4e12-852a-36cf28865e6c/download/
2022-04-29 18:37:35.221196+00:00
2022-04-29 18:37:39.437817+00:00
Monthly average maps of CAMS Nitrogen Dioxide [kg m-3] over Germany in 2019, 2020 and 2021
image/png
Nitrogen Dioxide [kg m-3] over Germany for September 2019, 2020 and 2021
2022-04-29 18:37:35.221196+00:00
geosciences
100.0
0.5453707575798035
NO2
15.44607190412783
11.6
analysis
14.513981358189083
10.9
air quality analysis
39.27710843373494
32.6
Germany Jupyter notebook
7.349397590361446
6.1
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Germany
55.45545545545545
55.4
reliance service
13.734939759036145
11.4
earth sciences
100.0
0.9842240810394287
area
6.7736185383244205
3.8
Germany
9.80392156862745
5.5
air quality
27.98573975044563
15.7
map
8.921438082556591
6.7
air quality
22.63648468708389
17.0
NO2 in Germany Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services.
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44.5
cam
8.921438082556591
6.7
analysis
18.71657754010695
10.5
map
11.05169340463458
6.2
Air pollution
Environment/Environmental pollution/Air pollution
earth resources and remote sensing
100.0
0.5453707575798035
Research Object
14.380825565912119
10.8
atmospheric sciences
100.0
0.9842240810394287
reliance
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6.4
Germany
Copernicus Atmosphere Monitoring
15.179760319573903
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usage
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service
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analysis from Copernicus Atmosphere Monitoring
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usage of cam
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6.6
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
mantovani@meeo.it
Simone Mantovani
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007E2D01736861726547756964233866363535393930616166386237363861316564633362396432366239366161636834653466233732356634616233366362323664306662666330633132346337373565666565636865653439233665353832303261613234313237343666363338356365633037646633336666636832313166/content
2022-05-26 11:43:27.890726+00:00
2022-05-26 19:40:51.109381+00:00
Jupyter Notebook of CAMS European air quality analysis from Copernicus Atmosphere Monitoring during the covid-19 pandemic with RELIANCE services - Applied over Spain and variable Nitrogen Dioxide.
NO2_CAMS_jupyter.ipynb
2022-05-26 11:43:27.890726+00:00
https://datahub.egi.eu/share/3de1a9c0c965ae826fbda0b9b437a86cche668
2022-04-29 19:47:27.972968+00:00
2022-04-29 19:47:28.805516+00:00
netCDF data corresponding to daily average of CAMS Nitrogen Dioxide [kg m-3] over Spain for September 2019, September 2020 and September 2021
netCDF data for daily NO2over Spain in September 2019, 2020 and 2021
2022-04-29 19:47:27.972968+00:00
https://datahub.egi.eu/share/489f00848111c8cbd499758e3b218325ch9898
2022-04-29 19:47:09.991875+00:00
2022-04-29 19:47:10.342987+00:00
Geojson file used for retrieving data from the ADAM platform over Spain
Geojson for Spain
2022-04-29 19:47:09.991875+00:00
https://datahub.egi.eu/share/6092cd7dbbce61c24786690b1769b107chd637
2022-04-29 19:47:14.019386+00:00
2022-04-29 19:47:14.387938+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in September 2020
Data-Cube from ADAM platform over Spain in September 2020
2022-04-29 19:47:14.019386+00:00
https://datahub.egi.eu/share/7b091439cbe2495e666055a7345d02e4chdbd6
2022-04-29 19:47:12.006961+00:00
2022-04-29 19:47:12.377200+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in September 2019
Data-Cube from ADAM platform over Spain in September 2019
2022-04-29 19:47:12.006961+00:00
https://datahub.egi.eu/share/bae209d165d191dc2b35335df13dcf6fch07f4
2022-04-29 19:47:21.263306+00:00
2022-04-29 19:47:21.657982+00:00
Monthly average maps of CAMS Nitrogen Dioxide [kg m-3] over Spain in 2019, 2020 and 2021
Nitrogen Dioxide [kg m-3] over Spain for September 2019, 2020 and 2021
2022-04-29 19:47:21.263306+00:00
https://datahub.egi.eu/share/d0e748d67d2b1321a993e797a5e32f89che6a4
2022-04-29 19:47:25.870789+00:00
2022-04-29 19:47:26.221358+00:00
Daily average of CAMS Nitrogen Dioxidekg m-3] over Madrid in September 2021
Timeseries of Nitrogen Dioxide [kg m-3] over Madrid in september 2021
2022-04-29 19:47:25.870789+00:00
https://datahub.egi.eu/share/de7d41cb8f42cebeb7ccc182ab6f0822che597
2022-04-29 19:47:23.477955+00:00
2022-04-29 19:47:23.825865+00:00
Daily average maps of CAMS Nitrogen Dioxidekg m-3] over Spain on September 15, 2021
Nitrogen Dioxide [kg m-3] over Spain on September 15, 2021
2022-04-29 19:47:23.477955+00:00
https://datahub.egi.eu/share/e00e6916d9c8dfe2fe1ae3d44b1ab4f5ch0283
2022-04-29 19:47:16.006763+00:00
2022-04-29 19:47:16.352262+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in September 2021
Data-Cube from ADAM platform over Spain in September 2021
2022-04-29 19:47:16.006763+00:00
https://nordicesmhub.github.io/RELIANCE/demo-eosc-future/RELIANCE_Spain_NO2_month.html
2022-04-29 19:47:19.197013+00:00
2022-05-26 19:44:24.772790+00:00
Jupyter Notebook for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
text/html
HTML (jupyter book) of the Jupyter Notebook.
2022-04-29 19:47:19.197013+00:00
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
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181630
https://api.rohub.org/api/ros/c2142845-3530-447b-9936-b1684a8f7776/crate/download/
2022-04-29 19:46:43.833571+00:00
2025-10-18 11:43:36.361514+00:00
2022-04-29 19:46:43.833571+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
application/ld+json
https://w3id.org/ro-id/c2142845-3530-447b-9936-b1684a8f7776
CAMS
NO2
Spain
air quality
copernicus
jupyter-notebook
Jupyter Notebook
NO2 (Sept. 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 (Sept. 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. Apr 29 ,2022. https://w3id.org/ro-id/c2142845-3530-447b-9936-b1684a8f7776.
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biblio
output
input
tool
159619
https://api.rohub.org/api/resources/8139c8a0-8537-4fb1-8c8c-ee6f11235301/download/
2022-04-29 19:47:01.151452+00:00
2022-04-29 19:47:05.398622+00:00
Monthly average maps of CAMS Nitrogen Dioxide [kg m-3] over Spain in 2019, 2020 and 2021
image/png
Nitrogen Dioxide [kg m-3] over Spain for September 2019, 2020 and 2021
2022-04-29 19:47:01.151452+00:00
NO2 (Sept. 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services.
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43.1
area
7.24907063197026
3.9
Sep-2019
analysis
20.07434944237918
10.8
reliance service
13.389626055488542
11.1
Research Object
15.384615384615387
11.6
usage
8.364312267657992
4.5
usage of cam
7.840772014475272
6.5
earth resources and remote sensing
100.0
0.4471573829650879
geosciences
100.0
0.4471573829650879
Spain
10.780669144981411
5.8
Spain Jupyter notebook
7.35826296743064
6.1
Copernicus Atmosphere Monitoring
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2020
reliance
8.753315649867375
6.6
air quality
22.413793103448274
16.9
air quality
29.92565055762082
16.1
Spain
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
56.85685685685685
56.8
Air pollution
Environment/Environmental pollution/Air pollution
earth sciences
100.0
0.9815923571586609
atmospheric sciences
100.0
0.9815923571586609
air quality analysis
39.56574185765983
32.8
map
11.524163568773233
6.2
cam
8.885941644562335
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analysis
14.456233421750666
10.9
NO2
14.190981432360743
10.7
analysis from Copernicus Atmosphere Monitoring
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reliance
12.0817843866171
6.5
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
mantovani@meeo.it
Simone Mantovani
service-account-enrichment
Earth sciences
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007EDEE6736861726547756964236335616136613735373432353332343532623632653533653738663732373439636834366632233732356634616233366362323664306662666330633132346337373565666565636865653439233435386236633362393566303966653363323935373631346461373539666330636839376163/content
2022-05-01 20:18:43.754840+00:00
2023-05-16 18:06:58.961328+00:00
Jupyter Notebook for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
Jupyter Notebook of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Spain and variable Nitrogen Dioxide
2022-05-01 20:18:43.754840+00:00
https://datahub.egi.eu/share/00d23664c695cb6ce4c3f0438b1778f5ch5ad3
2022-05-01 20:18:45.772814+00:00
2022-05-01 20:18:46.118573+00:00
Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
Nitrogen Dioxide [µg m-3] over Spain for March 2019, 2020 and 2021
2022-05-01 20:18:45.772814+00:00
https://datahub.egi.eu/share/2a9a7f334fe6e73f55bf83595d9aef84ch59d8
2022-05-01 20:18:36.927892+00:00
2022-05-01 20:18:37.296723+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2019
Data-Cube from ADAM platform over Spain in March 2019
2022-05-01 20:18:36.927892+00:00
https://datahub.egi.eu/share/35c15202651e9a56b5791ddd9897fb33chd796
2022-05-01 20:18:50.139193+00:00
2022-05-01 20:18:50.505603+00:00
netCDF data corresponding to daily average of CAMS Nitrogen Dioxide [µg m-3] over Spain for March 2019, March 2020 and March 2021
netCDF data for daily NO2over Spain in March 2019, 2020 and 2021
2022-05-01 20:18:50.139193+00:00
https://datahub.egi.eu/share/50b107f60f369ff2414e679f6e411575ch4e1a
2022-05-01 20:18:47.735278+00:00
2022-05-01 20:18:48.113605+00:00
Daily average maps of CAMS Nitrogen Dioxideµg m-3] over Spain on March 15, 2021
Nitrogen Dioxide [µg m-3] over Spain on March 15, 2021
2022-05-01 20:18:47.735278+00:00
https://datahub.egi.eu/share/d7fb646b024a1d1f8b285f4ad9f313f6che876
2022-05-01 20:18:39.077503+00:00
2022-05-01 20:18:39.442685+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2020
Data-Cube from ADAM platform over Spain in March 2020
2022-05-01 20:18:39.077503+00:00
https://datahub.egi.eu/share/f79280441b0944a05a60c79f4cc3ef22che4a8
2022-05-01 20:18:41.097182+00:00
2022-05-01 20:18:41.478649+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2021
Data-Cube from ADAM platform over Spain in March 2021
2022-05-01 20:18:41.097182+00:00
https://datahub.egi.eu/share/fa58b7afada92ccf75ff97d1db4c1febch82eb
2022-05-01 20:18:34.542298+00:00
2022-05-01 20:18:34.967516+00:00
Geojson file used for retrieving data from the ADAM platform over Spain
Geojson for Spain
2022-05-01 20:18:34.542298+00:00
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
b9e063be-849a-4a79-99c3-a8d5368be106
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232757
https://api.rohub.org/api/ros/2f4c4963-ba0f-4069-a211-988fb62006ef/crate/download/
2022-05-01 20:15:42.899723+00:00
2025-10-18 11:43:31.408976+00:00
2022-05-01 20:15:42.899723+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
application/ld+json
https://w3id.org/ro-id/2f4c4963-ba0f-4069-a211-988fb62006ef
CAMS
NO2
Spain
air quality
copernicus
jupyter-notebook
Jupyter Notebook
NO2 (March 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 (March 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. May 01 ,2022. https://w3id.org/ro-id/2f4c4963-ba0f-4069-a211-988fb62006ef.
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biblio
output
tool
input
113226
https://api.rohub.org/api/resources/5fb2de1b-7f4d-417a-8282-c9a6bd8ce821/download/
2022-05-01 20:17:42.168217+00:00
2022-05-01 20:17:45.947272+00:00
Conda environment generated with conda-lock for linux-64
Conda environment linux-64
2022-05-01 20:17:42.168217+00:00
103103
https://api.rohub.org/api/resources/6d99c455-e836-4094-9157-4007d558fccf/download/
2022-05-01 20:17:48.671583+00:00
2022-05-01 20:17:52.451532+00:00
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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Jupyter Notebook for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
Jupyter Notebook of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Spain and variable Nitrogen Dioxide
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
Nitrogen Dioxide [µg m-3] over Spain for March 2019, 2020 and 2021
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2022-05-01 20:22:56.674576+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2019
Data-Cube from ADAM platform over Spain in March 2019
2022-05-01 20:18:36.927892+00:00
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netCDF data corresponding to daily average of CAMS Nitrogen Dioxide [µg m-3] over Spain for March 2019, March 2020 and March 2021
netCDF data for daily NO2over Spain in March 2019, 2020 and 2021
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2022-05-01 20:23:06.803802+00:00
Daily average maps of CAMS Nitrogen Dioxideµg m-3] over Spain on March 15, 2021
Nitrogen Dioxide [µg m-3] over Spain on March 15, 2021
2022-05-01 20:18:47.735278+00:00
https://datahub.egi.eu/share/d7fb646b024a1d1f8b285f4ad9f313f6che876
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This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2020
Data-Cube from ADAM platform over Spain in March 2020
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This dataset is a data-Cube retrieved from the ADAM platform over Spain in March 2021
Data-Cube from ADAM platform over Spain in March 2021
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Geojson file used for retrieving data from the ADAM platform over Spain
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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Jupyter Notebook Analysing the Air quality during Covid-19 pandemic using Copernicus Atmosphere Monitoring Service - Applied over Spain (March 2019, 2020, 2021) with Nitrogen Dioxide
NO2 (March 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - snapshot
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "Jupyter Notebook Analysing the Air quality during Covid-19 pandemic using Copernicus Atmosphere Monitoring Service - Applied over Spain (March 2019, 2020, 2021) with Nitrogen Dioxide." ROHub. May 01 ,2022. https://doi.org/10.24424/y6d7-b622.
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
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Nitrogen Dioxide [µg m-3] over Spain for March 2019, 2020 and 2021
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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Jupyter Notebook Analysing the Air quality during Covid-19 pandemic using Copernicus Atmosphere Monitoring Service - Applied over Spain (March 2019, 2020, 2021) with Nitrogen Dioxide.
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Simone Mantovani
Raul Palma
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Geojson file used for retrieving data from the ADAM platform over Spain
Geojson for Spain
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Daily average maps of CAMS Nitrogen Dioxideµg m-3] over Spain on April 15, 2021
Nitrogen Dioxide [µg m-3] over Spain on April 15, 2021
2022-05-02 19:59:31.650811+00:00
https://datahub.egi.eu/share/55a555fcb1d8a480405fc1d3618a6e7ech88c1
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
Nitrogen Dioxide [µg m-3] over Spain for April 2019, 2020 and 2021
2022-05-02 19:59:29.493185+00:00
https://datahub.egi.eu/share/6e08d114f88622a14d01b8b29b180accch183d
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2022-05-02 19:59:14.857932+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in April 2019
Data-Cube from ADAM platform over Spain in April 2019
2022-05-02 19:59:14.525168+00:00
https://datahub.egi.eu/share/7a5b1d8369dbb09ea444c09eaff53771ch7101
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2022-05-02 19:59:19.273457+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in April 2021
Data-Cube from ADAM platform over Spain in April 2021
2022-05-02 19:59:18.768728+00:00
https://datahub.egi.eu/share/8bea2c8acfcd7b49c811da980e5f4aa3ch479d
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2022-05-02 19:59:16.957468+00:00
This dataset is a data-Cube retrieved from the ADAM platform over Spain in April 2020
Data-Cube from ADAM platform over Spain in April 2020
2022-05-02 19:59:16.595981+00:00
https://datahub.egi.eu/share/d0db13cc6a4898930516a24eb1563cb1ch13bb
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2022-05-02 19:59:34.241696+00:00
netCDF data corresponding to daily average of CAMS Nitrogen Dioxide [µg m-3] over Spain for April 2019, April 2020 and April 2021
netCDF data for daily NO2over Spain in April 2019, 2020 and 2021
2022-05-02 19:59:33.791418+00:00
https://nordicesmhub.github.io/RELIANCE/demo-eosc-future/RELIANCE_Spain_NO2_month.html
2022-05-02 19:59:25.599292+00:00
2022-05-02 19:59:26.060435+00:00
Jupyter Notebook (stored in Github) for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
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online rendered jupyter book of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Spain and variable Nitrogen Dioxide
2022-05-02 19:59:25.599292+00:00
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2022-05-02 19:59:23.681279+00:00
2022-05-02 19:59:24.032351+00:00
Jupyter Notebook (stored in Github) for discovering, accessing and processing RELIANCE data cube, and creating a Research Object with results, and finally publish it in Zenodo
Jupyter Notebook (Github) of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services - Applied over Spain and variable Nitrogen Dioxide
2022-05-02 19:59:23.681279+00:00
https://reliance-dev.adamplatform.eu/69618:MODh20chlMO_4km/60e846ed6dfebc0806c823a6
2022-05-27 13:13:27.399314+00:00
2022-05-27 13:13:27.782299+00:00
Copernicus Atmosphere Monitoring Service
ADAM viewer CAMS NO2 April 1st 2019
2022-05-27 13:13:27.399314+00:00
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RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
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Iaquinta, Jean, Simone Mantovani, and Anne Foilloux. "NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. May 02 ,2022. https://w3id.org/ro-id/ee66eeb4-0b7e-4417-871e-fb9ddae286d9.
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
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Nitrogen Dioxide [µg m-3] over Spain for April 2019, 2020 and 2021
2022-05-02 19:58:42.071806+00:00
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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Related publication of the exploration presented in the Jupyter notebook
Soil water content in southern england derived from a cosmic-ray soil moisture observing system – cosmos-uk
2022-05-20 22:39:28.244049+00:00
https://doi.org/10.5194/hess-16-4079-2012
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2022-05-20 22:39:30.738071+00:00
Related publication of the exploration presented in the Jupyter notebook
Cosmos: the cosmic-ray soil moisture observing system
2022-05-20 22:39:29.949068+00:00
https://doi.org/10.5281/zenodo.6566942
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Contains outputs, (table and figures), generated in the Jupyter notebook of Cosmos-UK soil moisture
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https://doi.org/10.5281/zenodo.6567018
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Related publication of the exploration presented in the Jupyter notebook
Daily and sub-daily hydrometeorological and soil data (2013-2019) [cosmos-uk]
2022-05-20 22:39:26.375450+00:00
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The research object refers to the Cosmos-UK soil moisture notebook published in the Environmental Data Science book.
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Alejandro Coca-Castro, Doran Khamis, and Matt Fry. "Cosmos-UK soil moisture (Jupyter Notebook) published in the Environmental Data Science book." ROHub. May 20 ,2022. https://w3id.org/ro-id/435f534c-e49b-43c3-9bd6-3393100bef3f.
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Contains input Datasets of detectreeRGB AI4ER MRes Project used in the Jupyter notebook of Tree crown delineation using detectreeRGB
Input Datasets of detectreeRGB AI4ER MRes Project
2022-03-27 19:36:02.837817+00:00
https://doi.org/10.5281/zenodo.6387953
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Contains outputs, (vector, raster and figures), generated in the Jupyter notebook of Tree crown delineation using detectreeRGB
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https://github.com/shmh40/detectreeRGB
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Related publication of the modelling presented in the Jupyter notebook
detectreeRGB source code
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Lock conda file for osx-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for osx-64
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Pip requirements file containing libraries to install after conda lock
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Jupyter Notebook hosted by the Environmental Data Science Book.
Jupyter Notebook Forest modelling tree crown detect tree RGB
2022-03-27 19:36:00.835434+00:00
https://the-environmental-ds-book.netlify.app/gallery/modelling/forest-modelling-treecrown_detectreergb/forest-modelling-treecrown_detectreergb
2022-03-27 20:06:13.133384+00:00
2022-05-24 07:41:38.821589+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book.
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2022-03-27 20:06:13.133384+00:00
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The research object refers to the Tree crown delineation using detectreeRGB notebook published in the Environmental Data Science book.
Purpose:
Accurately delineating trees using detectron2, a library that provides state-of-the-art deep learning detection and segmentation algorithms.
Modelling approach:
An established deep learning model, Mask R-CNN was deployed from detectron2 library to delineate tree crowns accurately. A pre-trained model, named detectreeRGB, is provided to predict the location and extent of tree crowns from a top-down RGB image, captured by drone, aircraft or satellite. detectreeRGB was implemented in python 3.8 using pytorch v1.7.1 and detectron2 v0.5. Further details can be found in the repository documentation.
Highlights:
detectreeRGB advances the state-of-the-art in tree identification from RGB images by delineating exactly the extent of the tree crown.
We demonstrate how to apply the pretrained model to a sample image fetched from a Zenodo repository.
Our pre-trained model was developed using aircraft images of tropical forests in Malaysia.
The model can be further trained using the user’s own images
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Jupyter Notebook
Tree crown delineation using detectreeRGB (Jupyter Notebook) published in the Environmental Data Science book - fork
Tree crown delineation using detectreeRGB (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
Sebastian H. M. Hickman, and Alejandro Coca-Castro. "Tree crown delineation using detectreeRGB (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Mar 27 ,2022. https://w3id.org/ro-id/6bc62582-2f11-4983-a51c-0af32459eca6.
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image/png
Image showing interactive plot of detectreeRGB model predictions of tree crown over a sample drone image in Sepilok, Sabah, Malaysia
2022-03-27 19:35:54.932203+00:00
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detectreeRGB advances the state-of-the-art in tree identification from RGB images by delineating exactly the extent of the tree crown.
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Anne Fouilloux
environmental.ds.book@gmail.com
Environmental Data Science Book Community
The Alan Turing Institute
Alejandro Coca-Castro
University of Cambridge
Sebastian H. M. Hickman
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
166501
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2022-05-27 19:38:17.085220+00:00
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2022-05-27 19:38:17.085220+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. May 27 ,2022. https://w3id.org/ro-id/ef5953b8-d6b7-47a2-b115-929ac8179864.
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
image/png
Nitrogen Dioxide [µg m-3] over Spain for April 2019, 2020 and 2021
2022-05-27 19:39:07.926994+00:00
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Anne Fouilloux
0000-0002-1784-2920
mantovani@meeo.it
Simone Mantovani
admin NordicESMHub
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
222677
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2022-05-27 19:51:54.292278+00:00
This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. May 27 ,2022. https://w3id.org/ro-id/4e8ee688-dd76-4faa-a088-028fe709bd37.
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
image/png
Nitrogen Dioxide [µg m-3] over Spain for April 2019, 2020 and 2021
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Anne Fouilloux
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mantovani@meeo.it
Simone Mantovani
admin NordicESMHub
service-account-enrichment
Earth sciences
10.13039/501100000781
European Commission
UiO
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
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This Research Object demonstrates how to use CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services and compute monthly map of NO2 over a given geographical area, here Spain
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NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services
MANUAL
Anne Foilloux, Jean Iaquinta, and Simone Mantovani. "NO2 (April 2019, 2020, 2021) in Spain Jupyter notebook demonstrating the usage of CAMS European air quality analysis from Copernicus Atmosphere Monitoring with RELIANCE services." ROHub. May 27 ,2022. https://w3id.org/ro-id/192c3541-b61d-4e21-80d5-691d667b44cb.
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Monthly average maps of CAMS Nitrogen Dioxide [µg m-3] over Spain in 2019, 2020 and 2021
image/png
Nitrogen Dioxide [µg m-3] over Spain for April 2019, 2020 and 2021
2022-05-27 21:37:22.700545+00:00
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Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
mantovani@meeo.it
Simone Mantovani
admin NordicESMHub
service-account-enrichment
Applied sciences
10.13039/501100000781
European Commission
https://raw.githubusercontent.com/annefou/galaxy-xarray/main/climate-pangeo-notebook.ipynb
2022-05-29 18:54:29.002656+00:00
2022-05-29 18:54:29.574943+00:00
In this tutorial, we will learn about Xarray, one of the most used Python library from the Pangeo ecosystem
Pangeo Notebook in Galaxy - Introduction to Xarray
2022-05-29 18:54:29.002656+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
https://training.galaxyproject.org/training-material/topics/climate/images/CAMS-PM2_5-fc-20211224.png
2022-05-29 17:49:12.449425+00:00
2022-05-29 18:04:37.384814+00:00
Jupyter Notebook showing Copernicus Monitoring Service PM2.5 forecasts 24th December 2021 at 12:00 UTC.
image/png
CAMS PM2.5 forecasts 24th December 2021 at 12:00 UTC
2022-05-29 17:49:12.449425+00:00
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https://api.rohub.org/api/ros/c3aa751b-c32d-48d2-b781-0ab44bedc252/crate/download/
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2025-10-18 11:32:52.356190+00:00
2022-05-29 17:44:36.557158+00:00
This [tutorial](https://training.galaxyproject.org/training-material/topics/climate/tutorials/pangeo-notebook/tutorial.html) is from the Galaxy Training Network.
In this tutorial, we will learn about Xarray, one of the most used Python library from the Pangeo ecosystem.
We will be using data from Copernicus Atmosphere Monitoring Service and more precisely PM2.5 (Particle Matter < 2.5 μm) 4 days forecast from December, 22 2021. Parallel data analysis with Pangeo is not covered in this tutorial.
application/ld+json
https://w3id.org/ro-id/c3aa751b-c32d-48d2-b781-0ab44bedc252
Jupyter Notebook
Pangeo Notebook in Galaxy - Introduction to Xarray
MANUAL
Anne Foilloux, and Jean Iaquinta. "Pangeo Notebook in Galaxy - Introduction to Xarray." ROHub. May 29 ,2022. https://w3id.org/ro-id/c3aa751b-c32d-48d2-b781-0ab44bedc252.
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This [tutorial](https://training.galaxyproject.org/training-material/topics/climate/tutorials/pangeo-notebook/tutorial.html) is from the Galaxy Training Network.
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annefou@geo.uio.no
Anne Fouilloux
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UiO
jean.iaquinta@geo.uio.no
Jean Iaquinta
admin NordicESMHub
service-account-enrichment
Applied sciences
10.13039/501100000781
European Commission
https://annefou.github.io/pangeo_CMIP6_masked_and_weighted_average/
2022-05-29 19:08:42.235502+00:00
2022-05-29 19:08:42.823791+00:00
This is the rendered Jupyter notebook
Website showing the rendered Jupyter notebook
2022-05-29 19:08:42.235502+00:00
https://raw.githubusercontent.com/annefou/pangeo_CMIP6_masked_and_weighted_average/main/masked_and_weighted_average.ipynb
2022-05-29 20:12:44.448950+00:00
2022-05-29 20:12:45.029001+00:00
upyter notebook demonstrating the usage of masks and computing weighted average with Pangeo CMIP6 data.
Using masks and computing weighted average with Pangeo CMIP6 data (Jupyter Notebook)
2022-05-29 20:12:44.448950+00:00
01xtthb56
University of Oslo
101017502
RELIANCE
Research Lifecycle Management for Earth Science Communities and Copernicus Users
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2022-05-29 18:09:01.424769+00:00
This jupyter notebook demonstrates the usage of masks and shows how to compute a weighted average with Pangeo CMIP6 data
application/ld+json
https://w3id.org/ro-id/03dc6999-4799-4739-b184-0a9d11c50aa4
climate
Jupyter Notebook
Using masks and computing weighted average with Pangeo CMIP6
MANUAL
Anne Foilloux, and admin NordicESMHub. "Using masks and computing weighted average with Pangeo CMIP6." ROHub. May 29 ,2022. https://w3id.org/ro-id/03dc6999-4799-4739-b184-0a9d11c50aa4.
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Plot of the global weighted average and unweighted average.
image/png
Comparison between weighted and unweighted global mean
2022-05-29 18:19:33.030598+00:00
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
Pangeo CMIP6 data
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Using masks and computing weighted average with Pangeo CMIP6.
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annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
nordicesmhub@gmail.com
admin NordicESMHub
service-account-enrichment
Applied sciences
Climatology
https://github.com/ESCOMP/CESM
2022-06-12 19:28:28.652973+00:00
2022-06-12 19:28:29.254776+00:00
This github repository contains all the versions of the Community Earth System Model (CESM).
Source code of CESM
2022-06-12 19:28:28.652973+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33a425bd13fde6e5a21/display?to_ext=data&hdca_id=8ca88ef64f587a1e&element_identifier=plot
2022-06-12 19:46:58.117971+00:00
2022-06-12 19:46:58.887727+00:00
Plot showing the reference height temperature (Kelvin) for 0001-02-01 00:00:00
Reference height temperature plot
2022-06-12 19:46:58.117971+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33a53dd3a49d7755c69/display?to_ext=data&hdca_id=bb750a5908336204&element_identifier=cesm_log.txt
2022-06-12 19:42:13.540759+00:00
2022-06-12 19:42:13.770339+00:00
cesm_log.txt
2022-06-12 19:42:13.540759+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33a631cc9273d4c9cff/display?to_ext=tar
2022-06-12 19:25:22.239580+00:00
2022-06-12 19:25:22.759304+00:00
Tar file containing all the input datasets for running the Community Earth System Modelling in fully coupled mode B1850 f17_g19.
inputdata_cesm_2.1.3_B1850_f19_g17.tar
2022-06-12 19:25:22.239580+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33a9f86d43452ea92d4/display?to_ext=data&hdca_id=bb750a5908336204&element_identifier=cpl_log.txt
2022-06-12 19:42:45.965215+00:00
2022-06-12 19:42:46.257522+00:00
cpl_log.txt
2022-06-12 19:42:45.965215+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33abe24099ece8ecf8b/display?to_ext=data&hdca_id=bb750a5908336204&element_identifier=atm_log.txt
2022-06-12 19:40:57.754810+00:00
2022-06-12 19:57:46.465986+00:00
Collection containing the logfile for the atmosphere compoment.
atm_log.txt
2022-06-12 19:40:57.754810+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33ac6a6f7ad39875add/display?to_ext=txt
2022-06-12 19:26:39.579207+00:00
2022-06-12 19:53:19.325645+00:00
Customized user namelist for CAM restart (atmosphere component) to create history files and restart files at the end of the run.
user_nl_cam_rs
2022-06-12 19:26:39.579207+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33ad451692baeeaddab/display?to_ext=netcdf
2022-06-12 19:45:23.938693+00:00
2022-06-12 19:45:24.454344+00:00
History file (1 month) for the atmosphere component (CAM).
b1850_f19_g17.cam.h0.0001-01.nc
2022-06-12 19:45:23.938693+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33adb3f747f35568f54/display?to_ext=data&hdca_id=bb750a5908336204&element_identifier=rof_log.txt
2022-06-12 19:43:37.120543+00:00
2022-06-12 19:43:37.816344+00:00
rof_log.txt
2022-06-12 19:43:37.120543+00:00
https://live.usegalaxy.eu/datasets/11ac94870d0bb33af3a72f3dab5a14f2/display?to_ext=data&hdca_id=bb750a5908336204&element_identifier=lnd_log.txt
2022-06-12 19:43:12.056705+00:00
2022-06-12 19:43:12.739217+00:00
lnd_log.txt
2022-06-12 19:43:12.056705+00:00
https://live.usegalaxy.eu/u/annefou/h/cesm-b1850-f19g17
2022-06-12 19:36:38.733653+00:00
2022-06-12 19:36:39.225827+00:00
This Galaxy history contains all the inputs and generated outputs for this CESM example. If you have an account on Galaxy Europe (if not you can open one), you can import this history and reuse it.
Galaxy history CESM B1850 f19_g17
2022-06-12 19:36:38.733653+00:00
01xtthb56
University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
https://toolshed.g2.bx.psu.edu/repository?repository_id=7aa3cab2c60dddc0&changeset_revision=7a7ba86e95a4
2022-06-12 19:32:03.784559+00:00
2022-06-12 19:56:01.321895+00:00
Link to the Galaxy Tool shed for CESM Galaxy Tool repository. This repository is useful whenever you want to install CESM Galaxy Tool in your own Galaxy instance. The version used in this example is revision: 7a7ba86e95a4
Galaxy Toolshed for CESM Galaxy Tool repository
2022-06-12 19:32:03.784559+00:00
NICEST-2 - the second phase of the Nordic Collaboration on e-Infrastructures for Earth System Modeling focuses on strengthening the Nordic position within climate modeling by leveraging, reinforcing and complementing ongoing initiatives.
Nordic Collaboration on e-Infrastructures for Earth System Modeling Tools
https://w3id.org/ro-id/ed4e6aa2-9db8-452d-9301-ba1606361034
CESM galaxy Tool.
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Galaxy CESM Tool Example.
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Einet Galaxy
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resource
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27937
https://api.rohub.org/api/ros/f99a5c78-6e3d-44a6-a283-3a61e46e249b/crate/download/
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2022-06-12 19:11:26.901247+00:00
This Research Object aggregates all the resources needed for running a fully coupled CESM B1850 f19_g17 on Galaxy using the CESM Galaxy Tool. i) Examples of input datasets needed for running CESM B1850 f17_g19 on Galaxy; ii) Galaxy Workflow (.ga) and corresponding CWL abstract and diagram; iii) Link to a published Galaxy history.
application/ld+json
https://w3id.org/ro-id/f99a5c78-6e3d-44a6-a283-3a61e46e249b
CESM
ESM
climate
climate-prediction
historical
Workflow
Galaxy CESM Tool Example
MANUAL
Anne Foilloux, and Jean Iaquinta. "Galaxy CESM Tool Example." ROHub. Jun 12 ,2022. https://w3id.org/ro-id/f99a5c78-6e3d-44a6-a283-3a61e46e249b.
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biblio
Folder containing all the logfiles.
logfiles
input
tool
output
https://workflowhub.eu/workflows/364
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2022-06-12 19:55:11.697497+00:00
This is a link to Workflow Research Object stored in workflowhub.eu. It contains a Galaxy workflow (.ga), abstract CWL (.cwl) and diagram (.png).
Galaxy Workflow for CESM Galaxy Tool
2022-06-12 19:33:26.020345+00:00
https://workflowhub.eu/workflows/364/diagram?version=1
2022-06-12 19:16:41.044493+00:00
2022-06-12 19:56:56.251936+00:00
Abstract CWL Automatically generated from the Galaxy workflow file: Workflow constructed from history CESM B1850 f19_g17
Abstract CWK figure for CESM Galaxy Tool
2022-06-12 19:16:41.044493+00:00
https://www.cesm.ucar.edu/
2022-06-12 19:21:08.294812+00:00
2022-06-12 19:21:08.846263+00:00
General webpage where the documentation for the Community Earth System Model is available.
CESM Documentation
2022-06-12 19:21:08.294812+00:00
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
UiO
jean.iaquinta@geo.uio.no
Jean Iaquinta
admin NordicESMHub
service-account-enrichment
Oceanography
Applied sciences
Climatology
https://raw.githubusercontent.com/Quickbeasts51429/IMD_ANALYSIS/main/IMD_temperature-rolling-mean.ipynb
2022-06-24 10:51:09.924094+00:00
2022-06-24 10:51:12.284464+00:00
This jupyter notebook uses a rolling mean to show the trend in maximum temperature timeseries from the India Meteorological Department.
Trend on IMD maximum temperature timeseries (Jupyter Notebook)
2022-06-24 10:51:09.924094+00:00
https://raw.githubusercontent.com/Quickbeasts51429/IMD_ANALYSIS/main/Rainfall.ipynb
2022-06-24 10:42:13.346314+00:00
2022-06-24 10:42:18.045826+00:00
This jupyter notebook shows how to read and analyze Rainfall timeseries from the India Meteorological Department.
Analysis of IMD Rainfall timeseries (Jupyter Notebook)
2022-06-24 10:42:13.346314+00:00
https://raw.githubusercontent.com/Quickbeasts51429/IMD_ANALYSIS/main/Tmax.ipynb
2022-06-24 10:45:11.840662+00:00
2022-06-24 10:45:14.198941+00:00
This jupyter notebook shows how to read and analyze maximum temperature timeseries from the India Meteorological Department.
Analysis of IMD maximum temperature timeseries (Jupyter Notebook)
2022-06-24 10:45:11.840662+00:00
https://raw.githubusercontent.com/Quickbeasts51429/IMD_ANALYSIS/main/Tmin.ipynb
2022-06-24 10:46:49.881365+00:00
2022-06-24 10:46:52.828886+00:00
This jupyter notebook shows how to read and analyze minimum timeseries from the India Meteorological Department.
Analysis of IMD minimum temperature timeseries (Jupyter Notebook)
2022-06-24 10:46:49.881365+00:00
https://raw.githubusercontent.com/annefou/NDVI_Mumbai/main/Copernicus-Land-analysis.ipynb
2022-07-22 14:53:14.343263+00:00
2022-07-22 14:53:17.468756+00:00
Demonstrate the usage of Copernicus Land NDVI product to assess the changes in the presence of live green vegetation over the region of Mumbai.
Methodology approach
- Use NDVI data from the Copernicus Global Land Service portal (https://land.copernicus.vgt.vito.be/PDF/portal/Application.html)
- Visualize NDVI monthly statistics (long term statistics between 1999 - 2019 and short term statistics 2015-2019
Select a single point and compare NDVI from 2021 with NDVI long term statistics
NDVI maps over the region of Mumbai (India) using Copernicus Land NDVI products (Jupyter Notebook)
2022-07-22 14:53:14.343263+00:00
14960
https://api.rohub.org/api/ros/6942229f-fba8-415d-a326-0ae5fd6360da/crate/download/
2022-06-16 14:08:36.887193+00:00
2025-10-18 11:32:24.647271+00:00
2022-06-16 14:08:36.887193+00:00
The project aims at establishing the trends of temperature , precipitation and air currents over the city of Mumbai. This will lead to establishment of concrete analysis of Climate Change on a 'local' basis and would help establish a suitable action plan.
application/ld+json
https://w3id.org/ro-id/6942229f-fba8-415d-a326-0ae5fd6360da
India
Mumbai
climate
rainfall
temperature
Mumbai : Analysis of evident effects of Climate Change
MANUAL
Jha, Soumya, and Anne Foilloux. "Mumbai : Analysis of evident effects of Climate Change." ROHub. Jun 16 ,2022. https://w3id.org/ro-id/6942229f-fba8-415d-a326-0ae5fd6360da.
biblio
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Webpage containing information about Temperature and Rainfall data from the India Meteorological Department:
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Monitoring Santorini volcano (Greece) breathing from space - by M. Foumelis, E. Trasatti, E. Papageorgiou, S. Stramondo, I. Parcharidis Geophys. J. Int., 2013. https://doi.org/10.1093/gji/ggs135
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GNSS data from 2011-2012 at Santorini (Greece)
GNSS data (obs_gps.txt)
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InSAR data (obs_sar.txt)
2022-07-07 10:47:20.893969+00:00
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https://www.frontiersin.org/articles/10.3389/feart.2022.917222/full
2022-07-07 10:44:11.061864+00:00
2022-07-07 10:44:12.643965+00:00
Volcanic and Seismic Source Modeling: An Open Tool for Geodetic Data Modeling - by E. Trasatti Frontiers in Earth Science, 2022. https://doi.org/10.3389/feart.2022.917222
Volcanic and Seismic Source Modeling: An Open Tool for Geodetic Data Modeling
2022-07-07 10:44:11.061864+00:00
service-account-enrichment
http://doi.org/10.1175/1520-0477(1996)077%3C0437:TNYRP%3E2.0.CO;2
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Related publication of the exploration presented in the Jupyter notebook
The NMC/NCAR 40-year reanalysis project
2022-07-24 18:44:23.809948+00:00
Environmental research
Climatology
https://doi.org/10.1175/BAMS-D-20-0117.1
2022-07-24 18:44:26.453549+00:00
2022-07-24 18:44:26.867060+00:00
Related publication of the exploration presented in the Jupyter notebook
Quantifying Causal Pathways of Teleconnections
2022-07-24 18:44:26.453549+00:00
https://doi.org/10.5281/zenodo.6824189
2022-07-24 18:44:21.623972+00:00
2022-07-24 18:44:22.048108+00:00
Contains outputs, (figures), generated in the Jupyter notebook of Concatenating a gridded rainfall reanalysis dataset into a time series
Outputs
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https://downloads.psl.noaa.gov/Datasets/ncep.reanalysis.derived/surface_gauss/prate.sfc.mon.mean.nc
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2022-07-24 18:44:18.402669+00:00
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Conda environment when user want to have the same libraries installed without concerns of package versions
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Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
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The research object refers to the Concatenating a gridded rainfall reanalysis dataset into a time series notebook published in the Environmental Data Science book.
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climate science
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Concatenating a gridded rainfall reanalysis dataset into a time series (Jupyter Notebook) published in the Environmental Data Science book
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Timothy Lam, Marlene Kretschmer, Samantha Adams, Rachel Prudden, Elena Saggioro, Nick Homer, and Alejandro Coca-Castro. "Concatenating a gridded rainfall reanalysis dataset into a time series (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Jul 24 ,2022. https://w3id.org/ro-id/ea34568e-d86e-4720-be2f-3f826f66a26c.
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University of Reading
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Elena Saggioro
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University of Reading
m.j.a.kretschmer@reading.ac.uk
Marlene Kretschmer
University of Edinburgh
nhomer@turing.ac.uk
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Met Office Informatics Lab
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Rachel Prudden
Met Office Informatics Lab
samantha.adams@metoffice.gov.uk
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https://discourse.pangeo.io/t/september-1-2022-handling-large-geo-data-with-julia/2656
2022-09-02 19:15:52.939627+00:00
2022-09-02 19:15:53.645033+00:00
You will find here all the information published to advertise the Pangeo Show & Tell Talk frm Felix Cremer on "Handling large geo data with Julia ".
Pangeo discourse post announcing 1st September Show & Tell by Felix Cremer.
2022-09-02 19:15:52.939627+00:00
https://github.com/JuliaDataCubes/ESDLTutorials
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2022-09-05 13:48:03.496113+00:00
This will become a selection of tutorials on the use of ESDL.jl and YAXArrays.jl julia packages for the handling of large scale out-of-core geospatial datasets.
github
ESDLtutorial Github repository.
2022-09-02 19:36:28.455672+00:00
https://github.com/JuliaDataCubes/ESDLTutorials/raw/main/data/ne_50m_admin_0_countries.dbf
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Part of ne_50m_admin_0_countries shapefile.
ne_50m_admin_0_countries.dbf
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https://github.com/JuliaDataCubes/ESDLTutorials/raw/main/data/ne_50m_admin_0_countries.shp
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2022-09-08 09:47:41.190627+00:00
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2022-09-08 09:47:51.906422+00:00
Part of ne_50m_admin_0_countries shapefile.
application/x-qgis
ne_50m_admin_0_countries.shx
2022-09-02 19:29:06.833916+00:00
https://hackmd.io/@pangeo/showandtell
2022-09-20 12:05:09.775445+00:00
2022-09-20 12:05:11.915234+00:00
This is the shared document we use for all the Pangeo Show and Tell. We collect information, Q&A and feedback.
Each Show and Tell has its own sub-section.
HackMD Pangeo Show and Tell
2022-09-20 12:05:09.775445+00:00
https://juliadatacubes.github.io/YAXArrays.jl/dev/
2022-09-02 19:18:10.607898+00:00
2022-09-02 19:18:11.226797+00:00
YAXArrays.jl is another xarray-like Julia package.
A package for operating on out-of-core labeled arrays, based on stores like NetCDF, Zarr or GDAL.
Package Features:
- open datasets from a variety of sources (NetCDF, Zarr, ArchGDAL)
- interoperability with other named axis packages through YAXArrayBase
- efficient mapslices(x) operations on huge multiple arrays, optimized for high-latency data access (object storage, compressed datasets)
YAXArrays.jl Documentation
2022-09-02 19:18:10.607898+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.README.html
2022-09-02 19:23:40.734491+00:00
2022-09-02 19:24:04.940893+00:00
Admin 0 & Countries | Natural Earth
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ne_50m_admin_0_countries.README.html
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2022-09-02 19:25:06.654522+00:00
Version
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2022-09-02 19:26:01.662704+00:00
cpg file from shapefile dataset.
ne_50m_admin_0_countries.cpg
2022-09-02 19:26:00.758390+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.prj
2022-09-02 19:27:59.472971+00:00
2022-09-08 09:48:47.785910+00:00
Part of ne_50m_admin_0_countries shapefile (projection information).
ne_50m_admin_0_countries.prj
2022-09-02 19:27:59.472971+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/overallintro.ipynb
2022-09-02 19:19:48.682613+00:00
2022-09-02 19:21:25.363815+00:00
Jupyter Notebook used by Felix during the Pangeo Show & Tell to demonstrate how to use EarthDataLab.jl to do large scale computations.
To execute this Jupyter Notebook, data contained in the "input folder" is needed (please create a folder called "data" in the folder where you have stored the notebook).
How to use EarthDataLab.jl to do large scale computations (Jupyter Notebook)
2022-09-02 19:19:48.682613+00:00
04jcwf484
Nordic e-Infrastructure Collaboration
2022-09-15 07:32:01.063467+00:00
False
2022-10-05 11:05:15.777066+00:00
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This talk is part of the Pangeo Show & Tell series and was given on September 1st 2022 by Felix Cremer.
Bio
Felix Cremer received his diploma in mathematics from the University of Leipzig in 2014. In 2016 he started his PhD study on time series analysis of hypertemporal Sentinel-1 radar data. He currently works at the Max-Planck-Institute for Biogeochemistry on the development of the JuliaDataCubes ecosystem in the scope of the NFDI4Earth 5 project.
Abstract
The Earth Data Lab (EDL) is a data cube framework in Julia for the efficient handling of raster data. It is based on the YAXArrays.jl package. YAXArrays.jl provides functionality to deal with labelled arrays, similar to the xarray python package and it also provides efficient and easy multithreading and distributed computation of user defined functions along arbitrary slices of the data.
EarthDataLab.jl uses DiskArrays.jl in the backend to deal with out of memory datasets. In this Show-and-Tell Felix is going to give a short introduction into the EarthDataLab.jl package for raster data handling in Julia.
application/ld+json
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geodata
julia
Video
Handling large geo data with Julia
MANUAL
Felix Cremer, and Pangeo Europe. "Handling large geo data with Julia." ROHub. Sep 02 ,2022. https://w3id.org/ro-id/a802f7dc-f3f4-4eac-b69f-748fb90958fb.
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input
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Plot from the Julia Jupyter notebook.
image/png
plot_italy_julia_pangeo_ST.png
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A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
on Sep-1-2022
handling
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5.7
geo data
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other earth sciences
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in 2014
The Earth Data Lab (EDL) is a data cube framework in Julia for the efficient handling of raster data.
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Felix Cremer
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In this Show-and-Tell Felix is going to give a short introduction into the EarthDataLab.jl package for raster data handling in Julia.
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EarthDataLab.jl
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Science and technology
parcel
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This talk is part of the Pangeo Show & Tell series and was given on September 1st 2022 by Felix Cremer.
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YAXArrays.jl package
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diploma
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computer science
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Library and museum
Arts, culture and entertainment/Culture/Library and museum
https://youtu.be/18_e8wmI9Os
2022-09-02 19:13:04.311770+00:00
2022-09-02 19:32:10.440106+00:00
This is the recorded talk from Felix Cremer during the Pangeo Show & Tell in September 1st, 2022. Felix is going through his Julia Notebook and explain us about handling large geo data with Julia.
Youtube video "Handling large geo data with julia by Felix Cremer."
2022-09-02 19:13:04.311770+00:00
Bohdan Bilun
Max-Planck-Institute (Germany)
fcremer@bgc-jena.mpg.de
Felix Cremer
pangeo.europe@gmail.com
Pangeo Europe
service-account-enrichment
http://doi.org/10.1109/IGARSS47720.2021.9553499
2022-09-21 22:55:46.631043+00:00
2022-09-21 22:55:50.115535+00:00
Related publication of the exploration presented in the Jupyter notebook
Global land use / land cover with Sentinel 2 and deep learning
2022-09-21 22:55:46.631043+00:00
Geography
Environmental research
https://doi.org/10.5281/zenodo.7101976
2022-09-21 22:55:41.737294+00:00
2022-09-21 22:55:43.928184+00:00
Contains outputs, (figures and tables), generated in the Jupyter notebook of Exploring Land Cover Data (Impact Observatory)
Outputs
2022-09-21 22:55:41.737294+00:00
https://edsbook.org/notebooks/gallery/b128b282-dee7-44a7-bc21-f1fd21452a83/notebook.html
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2023-03-20 18:50:35.195590+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
text/html
Online rendered version of the Jupyter notebook
2022-09-23 08:45:44.438607+00:00
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Lock conda file for linux-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for linux-64
2022-09-23 08:45:49.944297+00:00
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Lock conda file for osx-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for osx-64
2022-09-23 08:45:54.442299+00:00
https://github.com/eds-book-gallery/b128b282-dee7-44a7-bc21-f1fd21452a83/tree/master/.lock/conda-win-64.lock
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Lock conda file for win-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for win-64
2022-09-23 08:45:58.830681+00:00
https://planetarycomputer.microsoft.com/api/stac/v1/collections/io-lulc
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Contains input of the Jupyter Notebook - Exploring Land Cover Data (Impact Observatory) used in the Jupyter notebook of Exploring Land Cover Data (Impact Observatory)
Input of the Jupyter Notebook - Exploring Land Cover Data (Impact Observatory)
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Conda environment when user want to have the same libraries installed without concerns of package versions
Conda environment
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Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
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2022-09-21 22:54:53.791364+00:00
The research object refers to the Exploring Land Cover Data (Impact Observatory) notebook published in the Environmental Data Science book.
application/ld+json
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Environmental Science
Jupyter Notebook
Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
James Millington, Amandine Debus, and Anne Foilloux. "Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Sep 21 ,2022. https://w3id.org/ro-id/b128b282-dee7-44a7-bc21-f1fd21452a83.
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environmental.ds.book@gmail.com
Environmental Data Science Book Community
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aim
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Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book.
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https://www.impactobservatory.com/static/lulc_methodology_accuracy-ee742a0a389a85a0d4e7295941504ac2.pdf
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2022-09-21 22:55:56.645195+00:00
Related publication of the exploration presented in the Jupyter notebook
application/pdf
Impact Observatory - Methodology & Accuracy Summary
2022-09-21 22:55:53.343618+00:00
University of Cambridge
aed58@cam.ac.uk
Amandine Debus
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
environmental.ds.book@gmail.com
Environmental Data Science Book Community
The Environmental Data Science Community
King's College London
james.millington@kcl.ac.uk
James Millington
service-account-enrichment
Applied sciences
Earth sciences
Earth observation
https://discourse.pangeo.io/t/discrete-global-grid-systems-dggs-use-with-pangeo/2274
2022-10-07 12:57:56.628114+00:00
2022-10-07 12:57:57.384314+00:00
Discussion from Pangeo Discourse on DGGS use with Pangeo.
discussion
Pangeo discourse on "Discrete Global Grid Systems (DGGS) use with Pangeo"
2022-10-07 12:57:56.628114+00:00
https://discourse.pangeo.io/t/october-6-2022-dggs-and-their-potential-impact-in-geoscience-and-geospatial-communities/2759
2022-10-25 15:45:23.831383+00:00
2022-10-25 15:45:25.533053+00:00
Pangeo discourse announcement.
announcement
Pangeo discourse announcement Show & Tell on
"October 6, 2022: DGGS and their potential impact in Geoscience and Geospatial communities"
2022-10-25 15:45:23.831383+00:00
https://github.com/allixender/pangeo_dggs_2022
2022-10-07 12:51:00.692996+00:00
2022-10-07 12:51:01.877236+00:00
Github repository with examples used during the Pangeo Show and Tell - 06. Oct., 2022 on "DGGS and their potential impact in Geoscience and Geospatial" by Alexander Kmoch (Landscape Geoinformatics Lab, University of Tartu, Estonia).
Twitter:
@Lgeoinformatics │ @allixender
jupyter notebook
Pangeo Show and Tell : DGGS play ground
2022-10-07 12:51:00.692996+00:00
https://hackmd.io/@pangeo/showandtell
2022-10-25 07:27:19.067533+00:00
2022-10-25 07:27:21.668017+00:00
This is the shared document we use for all the Pangeo Show and Tell. We collect information, Q&A and feedback.
Each Show and Tell has its own sub-section.
Q&A
HackMD Pangeo Show and Tell
2022-10-25 07:27:19.067533+00:00
University of Tartu, Estonia
alexander.kmoch@ut.ee
Alexander Kmoch
0000-0003-4386-4450
https://raw.githubusercontent.com/allixender/pangeo_dggs_2022/main/environment.yml
2022-10-17 14:04:26.842481+00:00
2022-10-17 14:04:27.567607+00:00
Conda environment for running DGGS notebook examples.
conda
environment.yml
2022-10-17 14:04:26.842481+00:00
https://raw.githubusercontent.com/allixender/pangeo_dggs_2022/main/h3_intro.ipynb
2022-10-17 14:07:52.027331+00:00
2022-10-25 15:46:55.617638+00:00
Jupyter Notebook demonstrating how to perform Spatial Data Analysis with H3.
H3
h3_intro.ipynb
2022-10-17 14:07:52.027331+00:00
post@simula.no
00vn06n10
Simula Research Laboratory
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A Discrete Global Grid Systems (DGGS) is a unique type of spatial
reference system comprising of a hierarchy of uniquely identifiable
discrete grid cells that span the globe at multiple resolutions. A DGGS
can support efficient management, storage, integration, exploration,
mining, and visualisation of large geospatial datasets, and several
systems of tesselation and indexing schemes exist.
The main topic of this session is to introduce the audience to the
theoretical background of Discrete Global Grid Systems (DGGS), current
real-world implementations and exemplary use cases. This includes grid
generation, data indexing and sampling with DGGRID, and some spatial
analysis with with H3 and rHealPix.
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DGGS
OGC
grid
DGGS and their potential impact in Geoscience and Geospatial communities
MANUAL
http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
Kmoch, Alexander, and Pangeo Europe. "DGGS and their potential impact in Geoscience and Geospatial communities." ROHub. Oct 04 ,2022. https://w3id.org/ro-id/bd43e723-e961-4558-9b20-68ebd4b34a9b.
POLYGON ((-175.78125000000003 -80.21861403809504, -175.78125000000003 84.00379284323029, 191.25002145767215 84.00379284323029, 191.25002145767215 -80.21861403809504, -175.78125000000003 -80.21861403809504))
input
output
tool
biblio
9241429
https://api.rohub.org/api/resources/392f6daf-80e8-4691-a100-3a27db027fcc/download/
2022-10-07 12:55:23.133040+00:00
2022-10-07 12:55:28.147218+00:00
Slides for the presentation on DGGS given during Pangeo Show and Tell October 6, 2022 by Alex Kmoch.
application/pdf
DGGS
pdf
DGGS and their potential impact in Geoscience and Geospatial (pdf presentation)
2022-10-07 12:55:23.133040+00:00
1164046
https://api.rohub.org/api/resources/8a387283-0d83-4b6a-9fda-f6aec378d7b5/download/
2022-10-07 13:02:09.118273+00:00
2022-10-25 07:29:02.425425+00:00
A Discrete Global Grid System is a spatial reference system that uses a hierarchical tessellation of cells to partition and address the globe.
OGC Abstract Specification, 2017
image/png
Discrete Global Grid System (DGGS)
2022-10-07 13:02:09.118273+00:00
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
False
2022-10-25 15:48:48.641529+00:00
mining
8.550185873605948
6.9
issue
6.195786864931846
5.0
A Discrete Global Grid Systems (DGGS) is a unique type of spatial
reference system comprising of a hierarchy of uniquely identifiable
discrete grid cells that span the globe at multiple resolutions.
59.37873357228196
49.7
globe
4.4609665427509295
3.6
This includes grid
generation, data indexing and sampling with DGGRID, and some spatial
analysis with with H3 and rHealPix.
18.279569892473116
15.3
dataset
5.700123915737298
4.6
management
4.584882280049566
3.7
atmospheric sciences
100.0
0.913747251033783
generation
12.82051282051282
6.5
cell
11.834319526627219
6.0
The main topic of this session is to introduce the audience to the
theoretical background of Discrete Global Grid Systems (DGGS), current
real-world implementations and exemplary use cases.
22.34169653524492
18.7
computer operations and hardware
100.0
0.2547450661659241
Discrete Global Grid Systems
23.274161735700197
11.8
indexing
20.11834319526627
10.2
data
7.311028500619578
5.9
tesselation
6.07187112763321
4.9
earth sciences
100.0
0.913747251033783
indexing
15.489467162329616
12.5
comprising
9.664694280078896
4.9
Medical procedure-test
Health/Health treatment/Medical procedure-test
comprehension
7.311028500619578
5.9
cell
9.169764560099132
7.4
visualisation
8.674101610904584
7.0
cartography
62.5
1.5
grid cell
10.432190760059614
7.0
visualisation
11.242603550295858
5.7
system comprising
12.816691505216097
8.6
mining
11.045364891518737
5.6
mathematical and computer sciences
100.0
0.2547450661659241
data indexing
30.849478390462
20.7
indexing scheme
24.888226527570794
16.7
database
37.5
0.9
grid generation
21.013412816691506
14.1
generation
10.408921933085502
8.4
grid
6.07187112763321
4.9
https://youtu.be/kkLRtyZtxs0
2022-10-25 07:25:21.367265+00:00
2022-10-25 07:25:35.803708+00:00
This YouTube video is part of the Pangeo Show & Tell series and was given on October 6 2022 by Alexander Kmoch, Department of Geography of the University of Tartu, (Estonia).
show&tell
youtube
YouTube video "DGGS and their potential impact in Geoscience and Geospatial communities"
2022-10-25 07:25:21.367265+00:00
pangeo.europe@gmail.com
Pangeo Europe
service-account-enrichment
Applied sciences
Earth observation
https://api.vtexplorer.com/docs/response-ais.html
2022-12-08 11:55:50.363662+00:00
2022-12-19 17:59:56.908974+00:00
VTexplorer API (https://www.vtexplorer.com) documentation. This documentation can be useful to understand how AIS data can be processed.
text/html
API
VTexplorer API documentation.
2022-12-08 11:55:50.363662+00:00
https://celestrak.org/NORAD/documentation/tle-fmt.php
2022-12-24 09:43:33.106536+00:00
2022-12-24 09:43:33.827515+00:00
This document describes the NORA Two-Line Element Set Format (TLE) where data for each satellite consists of three lines with a fixed format (see document).
TLE
NORAD Two-Line Element Set Format
2022-12-24 09:43:33.106536+00:00
https://docs.google.com/document/d/19Qc0lhSPTjIbaZdruwgNjxIk-EW3C7HQ2BGX1iEKfRo/edit?usp=sharing
2022-12-03 12:22:11.080763+00:00
2022-12-03 12:22:11.948165+00:00
Main document (Google doc) provided when willing to start with TSAR Overview.
TSAR Overview
2022-12-03 12:22:11.080763+00:00
https://doi.org/10.3390/jmse10010112
2022-10-19 12:26:00.283770+00:00
2022-12-19 18:00:27.575120+00:00
The automatic identification system (AIS) was introduced in the maritime domain to increase the safety of sea traffic. AIS messages are transmitted as broadcasts to nearby ships and contain, among others, information about the identification, position, speed, and course of the sending vessels. AIS can thus serve as a tool to avoid collisions and increase onboard situational awareness. In recent years, AIS has been utilized in more and more applications since it enables worldwide surveillance of virtually any larger vessel and has the potential to greatly support vessel traffic services and collision risk assessment. Anomalies in AIS tracks can indicate events that are relevant in terms of safety and also security. With a plethora of accessible AIS data nowadays, there is a growing need for the automatic detection of anomalous AIS data. In this paper, we survey 44 research articles on anomaly detection of maritime AIS tracks. We identify the tackled AIS anomaly types, assess their potential use cases, and closely examine the landscape of recent AIS anomaly research as well as their limitations.
AIS
anomaly detection
automatic identification system
maritime safety
maritime security
Anomaly Detection in Maritime AIS Tracks: A Review of Recent Approaches
2022-10-19 12:26:00.283770+00:00
https://drive.google.com/drive/u/1/folders/0AI6umItIl7BxUk9PVA
2022-10-05 13:34:23.536054+00:00
2022-12-13 15:27:48.034278+00:00
Internally shared google drive with data and documents for T-SAR project
folder
TSAR google drive project area
2022-10-05 13:34:23.536054+00:00
https://drive.google.com/file/d/1VVlNufS9EkMcbOuhGD0uIWOEiMOj-hrW/view?usp=sharing
2022-12-19 17:55:01.781065+00:00
2022-12-19 18:00:49.447899+00:00
Slides (private) presenting the T-SAR project.
AIS
Vessel
TSAR project overview
2022-12-19 17:55:01.781065+00:00
https://drive.google.com/file/d/1t8pG1JOW7uj5gIbgmkXxILgzx1hO8FJk/view?usp=sharing
2022-12-19 19:08:04.054398+00:00
2022-12-19 19:08:05.371245+00:00
In maritime traffic surveillance, detecting illegal
activities, such as illegal fishing or transshipment of illicit
products is a crucial task of the coastal administration. In the open sea, one has to rely on Automatic Identification System (AIS) message transmitted by on-board transponders, which are captured by surveillance satellites. However, insincere vessels often intentionally shut down their AIS transponders to hide illegal activities. In the open sea, it is very challenging to differentiate intentional AIS shutdowns from missing reception
due to protocol limitations, bad weather conditions or restricting satellite positions. This paper presents a novel approach for the detection of abnormal AIS missing reception based on self-supervised deep learning techniques and transformer models.
Using historical data, the trained model predicts if a message should be received in the upcoming minute or not. Afterwards, the model reports on detected anomalies by comparing the prediction with what actually happens. Our method can process
AIS messages in real-time, in particular, more than 500 Millions AIS messages per month, corresponding to the trajectories of more than 60 000 ships. The method is evaluated on 1-year of real-world data coming from four Norwegian surveillance satellites. The results show that the method can detect confirmed real-world intentional AIS shutdown operations.
Detecting Intentional AIS Shutdown in Open Sea Maritime Surveillance Using Self-Supervised Deep Learning
2022-12-19 19:08:04.054398+00:00
https://en.wikipedia.org/wiki/Two-line_element_set
2022-12-26 10:22:06.052178+00:00
2022-12-26 10:22:07.502404+00:00
Description of Two-Line Element Set (TLE) from Wikipedia.
wikipedia
Two-Line Element Set (wikipedia)
2022-12-26 10:22:06.052178+00:00
https://gitlab.com/reproducibility-code/context-aware-autoencoders-for-anomaly-detection-in-maritime-surveillance/-/tree/master/
2023-01-05 14:54:54.005940+00:00
2023-01-05 14:54:57.935510+00:00
Gitlab repository set up for reproducibility purposes.
gitlab
repo set up for reproducibility purposes (private gitlab)
2023-01-05 14:54:54.005940+00:00
https://gitlab.com/simula_ais_message/marivisu-v2
2022-10-05 13:37:31.278559+00:00
2022-10-05 13:37:32.047690+00:00
Marivisu serves as a demonstrator of the machine learning model developed to detect anomalies in the vessel trajectory. This work was supported by the Norwegian Research Council (RCN) TSAR project under contract 287893. Satellite AIS data used for model development and testing has been made available courteously by its owner, the Norwegian Coastal Administration (Kystverket).
Marivisu v2
2022-10-05 13:37:31.278559+00:00
https://gitlab.com/simula_ais_message/pre-processing
2022-10-05 13:38:39.041164+00:00
2022-10-05 13:38:39.630828+00:00
n maritime traffic surveillance, detecting illegal activities, such as illegal fishing or transhipment of illicit products is a crucial task of the coastal administration. In the open sea, one has to rely on Automatic Identification System (AIS) messages transmitted by on-board transponders, which are captured by surveillance satellites. However, insincere vessels often intentionally shut down their AIS transponders to hide illegal activities. In the open sea, it is very challenging to differentiate intentional AIS shutdowns from missing reception due to protocol limitations, bad weather conditions or restricting satellite positions. This paper presents a novel approach for the detection of abnormal AIS missing reception based on self-supervised deep learning techniques and transformer models. Our method can process AIS messages in real-time, in particular, more than 500 Millions AIS messages per month, corresponding to the trajectories of more than 60 000 ships. The method is evaluated on 1-year of real-world data coming from four Norwegian surveillance satellites. The results show that the method can detect confirmed real-world intentional AIS shutdown operations.
Detecting Intentional AIS Shutdown in Open Sea Maritime Surveillance Using Self-Supervised Deep Learning
2022-10-05 13:38:39.041164+00:00
https://gitlab.com/simula_ais_message/vesseltype_identification_dae
2022-11-15 13:19:46.330017+00:00
2022-11-15 13:19:53.225356+00:00
Private repository containing Anomaly Detection in Vessels Trajectories using Context-Aware Autoencoders
vesseltype_identification_dae (gitlab private repo)
2022-11-15 13:19:46.330017+00:00
https://hackmd.io/@simula/tsar-project
2022-10-06 08:13:34.706608+00:00
2023-01-18 15:58:48.133720+00:00
Here we gather information about the project (notes taken during meetings, etc.). We use hackmd.io and text is written in markdown.
folder
TSAR meeting notes (hackmd)
2022-10-06 08:13:34.706608+00:00
Simula Research Laboratory
dokken@simula.no
Jørgen Schartum Dokken
0000-0001-6489-8858
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
Simula Research Laboratory
roehr@simula.no
Thomas Roehr
post@simula.no
00vn06n10
Simula Research Laboratory
2023-03-16 07:34:14.812840+00:00
6363978
https://api.rohub.org/api/ros/7998d851-41e8-4c51-aa06-deff6fd5f09a/crate/download/
2022-10-04 13:39:13.980365+00:00
2025-10-18 11:20:47.365546+00:00
2022-10-04 13:39:13.980365+00:00
In transport infrastructures, vessel traffic services, air traffic management, and connected cars all rely on unauthenticated and unencrypted messages transfer that renders these services vulnerable to cyberattacks. Typical attacks such as False Data Injection Attacks (FDIA) are challenging to detect as they alter the semantics of the data (e.g., by adding/removing/multiplying elements on real-time control equipment), while preserving the syntactical correctness of the messages. Identifying these attacks and classifying them as serious threats or unintentional false data has become a significant challenge of traffic monitoring authorities.
The TSAR project aims at demonstrating that recent advances in Artificial Intelligence (AI) can be leveraged in the automatic detection of FDIA in transport infrastructures. By combining realistic threat data generation based on constraint-based software testing techniques and automatic detection with deep reinforcement learning, TSAR will propose a new technology for automatic FDIA generation and detection. This technology will be empirically evaluated with end-users from the maritime domain and with open and accessible data in two other domains, namely air traffic control, and connected cars. By leveraging automatic detection of FDIA in traffic management systems, TSAR will also prepare the ground for the upcoming revolution in traffic management, which concerns, self-driving vessels, self-driving aircraft, and self-driving cars.
application/ld+json
https://w3id.org/ro-id/7998d851-41e8-4c51-aa06-deff6fd5f09a
AIS
Automatic Identification System
machine learning
maritime surveillance
self-supervised learning
T-SAR project
MANUAL
http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
Pierre Bernabé, Anne Fouilloux, Jørgen Schartum Dokken, Thomas Roehr, and Dusica Marijan. "T-SAR project." ROHub. Oct 04 ,2022. https://w3id.org/ro-id/7998d851-41e8-4c51-aa06-deff6fd5f09a.
output
biblio
papers, conference proceeding generated by the TSAR project.
TSAR_publications
Documentation and existing information about surveillance and detection of anomalies using Automatic Identification System data (ground and satellite).
documentation
tool
Bibliography collected on Automatic Identification System and detection of anomalies from AIS data (ground/satellite).
papers
input
1538071
https://api.rohub.org/api/resources/3e6f07ae-3da5-43ab-a7f9-4334ee01b8d2/download/
2022-10-06 08:54:49.163358+00:00
2022-10-06 08:57:06.885956+00:00
Distribution of samples on the surface of the globe.
image/png
labelled-messages.png
2022-10-06 08:54:49.163358+00:00
4435867
https://api.rohub.org/api/resources/c7d9b7cb-7192-471b-82f4-13fe89dc6906/download/
2022-10-17 19:53:16.725831+00:00
2022-10-17 19:53:19.988447+00:00
The NorSat-3 microsatellite will be launched into space during spring 2021 with a radar detector developed at the Norwegian Defence Research Establishment (FFI). It will provide improved surveillance capability of the shipping traffic in Norwegian national waters.
File downloaded from the Norwegian Defence Research Establishment (https://publications.ffi.no/nb/item/asset/dspace:7059/FFI-Facts_NorSat_Engelsk_web_v2.pdf).
application/pdf
NorSat-3: Ship Surveillance with a Navigation Radar Detector
2022-10-17 19:53:16.725831+00:00
392569
https://api.rohub.org/api/resources/ed59cb0a-e359-4f95-932d-88375b08daa7/download/
2022-12-07 07:59:22.749684+00:00
2022-12-07 08:00:09.185793+00:00
Major transportation surveillance protocols have not been specified with cyber securityin mind and therefore provide no encryption nor identification. These issues expose air and seatransport to false data injection attacks (FDIAs), in which an attacker modifies, blocks or emits fakesurveillance messages to dupe controllers and surveillance systems. There has been growing interestin conducting research on machine learning-based anomaly detection systems that address these newthreats. However, significant amounts of data are needed to achieve meaningful results with this typeof model. Raw, genuine data can be obtained from existing databases but need to be preprocessedbefore being fed to a model. Acquiring anomalous data is another challenge: such data is muchtoo scarce for both the Automatic Dependent Surveillance–Broadcast (ADS-B) and the AutomaticIdentification System (AIS). Crafting anomalous data by hand, which has been the sole methodapplied to date, is hardly suitable for broad detection model testing. This paper proposes an approachbuilt upon existing libraries and ideas that offers ML researchers the necessary tools to facilitatethe access and processing of genuine data as well as to automatically generate synthetic anomaloussurveillance data to constitute broad, elaborated test datasets. We demonstrate the usability of theapproach by discussing work in progress that includes the reproduction of related work, creation ofrelevant datasets and design of advanced anomaly
Improved Testing of AI-Based Anomaly DetectionSystems Using Synthetic Surveillance Data
2022-12-07 07:59:22.749684+00:00
https://w3id.org/ro-id/88fba8bd-f2f0-402e-8147-b73b71e8691a
2023-01-10 20:22:38.390514+00:00
2023-01-10 20:22:39.812665+00:00
Research Object with sample AIS data (in-situ)
Heterogeneous Integrated Dataset for Maritime Intelligence, Surveillance, and Reconnaissance
2023-01-10 20:22:38.390514+00:00
https://w3id.org/ro-id/d5d3a3ed-7bc1-40b9-b2cd-0496f599d0fe
2022-12-09 15:13:48.102607+00:00
2022-12-13 15:54:20.069866+00:00
This Research Object contains AIS data (raw and pre-processed by Statsat AS, Norway). It is not public and has been provided by Statsat AS (Norway).
If you are working at Simula, information on where to find pre-processed data on the EX3 is given in the Data RO (README.txt in the metadata folder).
This dataset has been used for developing new machine learning algorithms for detecting Intentional AIS Shutdown in Open Sea Maritime Surveillance in the framework of the T-SAR project (IKTPLUSS programme on reducing digital vulnerabilities, 10 MNOK from the Research Council of Norway, Norway) led by Simula Research Laboratory (Oslo, Norway).
AIS
AIS data prepared by Statsat AS for 2020
2022-12-09 15:13:48.102607+00:00
computer science
34.84162895927601
7.699999999999999
physics
9.049773755656108
2.0
air traffic
4.008152173913044
5.9
Political parties and movements
Politics/Political process/Political parties and movements
AIS observation
4.06015037593985
2.7
threat data generation
8.1203007518797
5.4
North Cape
AIS
9.079903147699758
7.5
transport
6.65859564164649
5.5
Navigation Radar Detector
6.537530266343826
5.4
transport infrastructure
12.330827067669171
8.2
technology
2.921195652173913
4.3
Greenland
artificial immune system
8.152173913043478
12.0
other earth sciences
54.45134430988258
0.9434656500816345
geosciences
51.00287938193204
0.6229659914970398
antenna
4.076086956521739
6.0
geophysics
51.00287938193204
0.6229659914970398
communications and radar
48.99712061806796
0.5984669923782349
AIS receiver
9.924812030075188
6.6
equipment
3.192934782608696
4.7
The TSAR project aims at demonstrating that recent advances in Artificial Intelligence (AI) can be leveraged in the automatic detection of FDIA in transport infrastructures.
23.821656050955415
18.7
vessel
4.823369565217392
7.1
self-driving car
9.62406015037594
6.4
satellite
6.929347826086956
10.2
crime
14.027149321266968
3.1
Waterway and maritime transport
Economy, business and finance/Economic sector/Transport/Waterway and maritime transport
Russia
earth sciences
54.45134430988258
0.9434656500816345
bolt head
4.755434782608696
7.0
Nrd payload
3.9097744360902253
2.6
artificial intelligence
5.842391304347826
8.6
car
6.779661016949153
5.6
Air and space accident and incident
Disaster, accident and emergency incident/Accident and emergency incident/Transport accident and incident/Air and space accident and incident
Education
Education
Linguistics
Science and technology/Social sciences/Linguistics
vessel
6.65859564164649
5.5
Svalbard
Juvenile delinquency
Society/Social problem/Juvenile delinquency
receiver
5.326876513317193
4.4
satellite
7.627118644067797
6.3
during the summer of
By combining realistic threat data generation based on constraint-based software testing techniques and automatic detection with deep reinforcement learning, TSAR will propose a new technology for automatic FDIA generation and detection.
16.178343949044585
12.7
detection
4.1440217391304355
6.1
In FFI proposed to deploy a microsatellite that could detect the navigational radar sig nals a Navigation Radar Detector (NRD). Now the Norwegian Space Centre has offered to include an experimental NRD on the NorSat microsatellite which is due for launch during spring .
6.114649681528663
4.8
Computer crime
Crime, law and justice/Crime/Computer crime
linguistics
24.43438914027149
5.4
tsar project
14.887218045112782
9.9
NorSat will be able to observe globally with both the AIS receiver and the radar detector, but the radar detector will mainly be used in the northern areas.
6.369426751592357
5.0
Nrd antenna
4.661654135338346
3.1
AIS message
4.511278195488722
3.0
The yellow and orange symbols are AIS observations from the satellite which came in addition to the existing AIS observations (green and blue) from the Coastal Administration ground based sensors.
4.45859872611465
3.5
In transport infrastructures, vessel traffic services, air traffic management, and connected cars all rely on unauthenticated and unencrypted messages transfer that renders these services vulnerable to cyberattacks.
43.05732484076432
33.8
Satellite technology
Economy, business and finance/Economic sector/Computing and information technology/Satellite technology
sensor
6.521739130434783
9.6
engineering
48.99712061806796
0.5984669923782349
India
AIS transmitter
3.458646616541353
2.3
NorSat
7.869249394673124
6.5
telecommunications
17.64705882352941
3.9
data
6.053268765133172
5.0
oceanography
45.54865569011742
0.789210855960846
data
4.347826086956522
6.4
French Guiana
attack
3.940217391304348
5.8
car
5.63858695652174
8.3
tsar
7.5407608695652195
11.100000000000001
background satellite
3.7593984962406015
2.5
Ministry of Defence
radar detector
9.473684210526315
6.3
False Data Injection Attack
11.138014527845035
9.2
during spring
cyberattack
2.921195652173913
4.3
tsar
6.416464891041163
5.3
Military equipment
Politics/Government/Defence/Military equipment
detector
7.263922518159807
6.0
generation
5.16304347826087
7.6
conveyance
4.959239130434783
7.3
radar
5.569007263922518
4.6
air traffic management
11.278195488721805
7.5
generation
7.02179176755448
5.8
earth sciences
45.54865569011742
0.789210855960846
radar
7.812500000000001
11.5
Transport
Economy, business and finance/Economic sector/Transport
https://www.simula.no/sites/default/files/publications/files/apprentissage_auto_supervise_pour_detecter_les_deconnections_ais_volontaires.pdf
2022-10-05 13:30:15.198183+00:00
2022-12-19 18:01:44.818563+00:00
The surveillance of maritime traffic is confronted with very important difficulties in detecting illegal activities at sea. In this article, we present the first results of a self-supervised learning method which aims to detect voluntary disconnec- tions of the identification’ system of vessels. By processing data from four Norwegian surveillance satellites, our lear- ning model aims to identify vessels suspected of illegal acti- vities such as fishing in protected areas or crossing econo- mic exclusion zones in real time. In this article, we present an approach based on self-supervised learning techniques, and experienced from real data.
application/pdf
AIS
Maritime Surveillance
machine learning
self-supervised
Self-supervised learning for the detection of illegal actions during maritime traffic monitoring
2022-10-05 13:30:15.198183+00:00
Anne Fouilloux
Simula Research Laboratory
dusica@simula.no
Dusica Marijan
Simula Research Laboratory
pierbernabe@simula.no
Pierre Bernabé
service-account-enrichment
Applied sciences
Earth sciences
https://discourse.pangeo.io/t/september-1-2022-handling-large-geo-data-with-julia/2656
2022-09-02 19:15:52.939627+00:00
2022-10-05 11:05:10.738946+00:00
You will find here all the information published to advertise the Pangeo Show & Tell Talk frm Felix Cremer on "Handling large geo data with Julia ".
Pangeo discourse post announcing 1st September Show & Tell by Felix Cremer.
2022-09-02 19:15:52.939627+00:00
https://github.com/JuliaDataCubes/ESDLTutorials
2022-09-02 19:36:28.455672+00:00
2022-10-05 11:05:08.571565+00:00
This will become a selection of tutorials on the use of ESDL.jl and YAXArrays.jl julia packages for the handling of large scale out-of-core geospatial datasets.
github
ESDLtutorial Github repository.
2022-09-02 19:36:28.455672+00:00
https://github.com/JuliaDataCubes/ESDLTutorials/raw/main/data/ne_50m_admin_0_countries.dbf
2022-09-02 19:27:25.914754+00:00
2022-10-05 11:04:59.380562+00:00
Part of ne_50m_admin_0_countries shapefile.
ne_50m_admin_0_countries.dbf
2022-09-02 19:27:25.914754+00:00
https://github.com/JuliaDataCubes/ESDLTutorials/raw/main/data/ne_50m_admin_0_countries.shp
2022-09-02 19:28:35.477795+00:00
2022-10-05 11:05:01.072396+00:00
Part of ne_50m_admin_0_countries shapefile.
application/x-qgis
ne_50m_admin_0_countries.shp
2022-09-02 19:28:35.477795+00:00
https://github.com/JuliaDataCubes/ESDLTutorials/raw/main/data/ne_50m_admin_0_countries.shx
2022-09-02 19:29:06.833916+00:00
2022-10-05 11:05:08.283815+00:00
Part of ne_50m_admin_0_countries shapefile.
application/x-qgis
ne_50m_admin_0_countries.shx
2022-09-02 19:29:06.833916+00:00
https://hackmd.io/@pangeo/showandtell
2022-09-20 12:05:09.775445+00:00
2022-10-05 11:05:12.569218+00:00
This is the shared document we use for all the Pangeo Show and Tell. We collect information, Q&A and feedback.
Each Show and Tell has its own sub-section.
HackMD Pangeo Show and Tell
2022-09-20 12:05:09.775445+00:00
https://juliadatacubes.github.io/YAXArrays.jl/dev/
2022-09-02 19:18:10.607898+00:00
2022-10-05 11:05:10.000002+00:00
YAXArrays.jl is another xarray-like Julia package.
A package for operating on out-of-core labeled arrays, based on stores like NetCDF, Zarr or GDAL.
Package Features:
- open datasets from a variety of sources (NetCDF, Zarr, ArchGDAL)
- interoperability with other named axis packages through YAXArrayBase
- efficient mapslices(x) operations on huge multiple arrays, optimized for high-latency data access (object storage, compressed datasets)
YAXArrays.jl Documentation
2022-09-02 19:18:10.607898+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.README.html
2022-09-02 19:23:40.734491+00:00
2022-10-05 11:05:10.091697+00:00
Admin 0 & Countries | Natural Earth
text/html
ne_50m_admin_0_countries.README.html
2022-09-02 19:23:40.734491+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.VERSION.txt
2022-09-02 19:24:56.813174+00:00
2022-10-05 11:05:08.830771+00:00
Version
text/plain
ne_50m_admin_0_countries.VERSION.txt
2022-09-02 19:24:56.813174+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.cpg
2022-09-02 19:26:00.758390+00:00
2022-10-05 11:05:10.411799+00:00
cpg file from shapefile dataset.
ne_50m_admin_0_countries.cpg
2022-09-02 19:26:00.758390+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/data/ne_50m_admin_0_countries.prj
2022-09-02 19:27:59.472971+00:00
2022-10-05 11:05:12.806251+00:00
Part of ne_50m_admin_0_countries shapefile (projection information).
ne_50m_admin_0_countries.prj
2022-09-02 19:27:59.472971+00:00
https://raw.githubusercontent.com/JuliaDataCubes/ESDLTutorials/main/overallintro.ipynb
2022-09-02 19:19:48.682613+00:00
2022-10-05 11:05:09.458760+00:00
Jupyter Notebook used by Felix during the Pangeo Show & Tell to demonstrate how to use EarthDataLab.jl to do large scale computations.
To execute this Jupyter Notebook, data contained in the "input folder" is needed (please create a folder called "data" in the folder where you have stored the notebook).
How to use EarthDataLab.jl to do large scale computations (Jupyter Notebook)
2022-09-02 19:19:48.682613+00:00
04jcwf484
Nordic e-Infrastructure Collaboration
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2022-10-05 11:05:15.777066+00:00
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https://api.rohub.org/api/ros/77a61d94-3318-4d33-a3c0-4730e7026fdb/crate/download/
2022-09-02 19:02:01.731061+00:00
2024-03-05 12:18:33.627372+00:00
2022-09-02 19:02:01.731061+00:00
This talk is part of the Pangeo Show & Tell series and was given on September 1st 2022 by Felix Cremer.
Bio
Felix Cremer received his diploma in mathematics from the University of Leipzig in 2014. In 2016 he started his PhD study on time series analysis of hypertemporal Sentinel-1 radar data. He currently works at the Max-Planck-Institute for Biogeochemistry on the development of the JuliaDataCubes ecosystem in the scope of the NFDI4Earth 5 project.
Abstract
The Earth Data Lab (EDL) is a data cube framework in Julia for the efficient handling of raster data. It is based on the YAXArrays.jl package. YAXArrays.jl provides functionality to deal with labelled arrays, similar to the xarray python package and it also provides efficient and easy multithreading and distributed computation of user defined functions along arbitrary slices of the data.
EarthDataLab.jl uses DiskArrays.jl in the backend to deal with out of memory datasets. In this Show-and-Tell Felix is going to give a short introduction into the EarthDataLab.jl package for raster data handling in Julia.
application/ld+json
https://w3id.org/ro-id/77a61d94-3318-4d33-a3c0-4730e7026fdb
geodata
julia
Video
Handling large geo data with Julia - snapshot
Handling large geo data with Julia
MANUAL
Felix Cremer, and Pangeo Europe. "Handling large geo data with Julia." ROHub. Sep 02 ,2022. https://doi.org/10.24424/2byf-7r07.
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output
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2022-09-02 19:30:37.195378+00:00
2022-10-05 11:05:15.216316+00:00
Plot from the Julia Jupyter notebook.
image/png
plot_italy_julia_pangeo_ST.png
2022-09-02 19:30:37.195378+00:00
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
raster data
13.14031180400891
5.9
memory dataset
14.823008849557521
6.7
computer operations and hardware
100.0
0.9168391823768616
on Sep-1-2022
diploma
7.854406130268199
4.1
In this Show-and-Tell Felix is going to give a short introduction into the EarthDataLab.jl package for raster data handling in Julia.
35.1981351981352
15.1
time series
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YAXArrays.jl package
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mathematical and computer sciences
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other earth sciences
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0.9773926138877869
The Earth Data Lab (EDL) is a data cube framework in Julia for the efficient handling of raster data.
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13.7
dataset
10.244988864142538
4.6
This talk is part of the Pangeo Show & Tell series and was given on September 1st 2022 by Felix Cremer.
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raster data handling
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multithreading
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geo data
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YAXArrays.jl
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In 2016
Felix Cremer
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6.5
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series analysis
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https://youtu.be/18_e8wmI9Os
2022-09-02 19:13:04.311770+00:00
2022-10-05 11:05:08.693363+00:00
This is the recorded talk from Felix Cremer during the Pangeo Show & Tell in September 1st, 2022. Felix is going through his Julia Notebook and explain us about handling large geo data with Julia.
Youtube video "Handling large geo data with julia by Felix Cremer."
2022-09-02 19:13:04.311770+00:00
Max-Planck-Institute (Germany)
fcremer@bgc-jena.mpg.de
Felix Cremer
pangeo.europe@gmail.com
Pangeo Europe
Applied sciences
10.13039/501100007601
Horizon 2020
10.13039/100010662
H2020 Excellent Science
https://besjournals-onlinelibrary-wiley-com.ezproxy.uio.no/doi/10.1111/j.1365-2745.2011.01859.x
2024-01-09 13:23:52.056842+00:00
2024-01-09 13:23:53.583909+00:00
Summary:
Climate change in northern high latitudes is predicted to be greater in winter rather than summer, yet little is known about the effects of winter climate change on northern ecosystems. Among the unknowns are the effects of an increasing frequency of acute, short-lasting winter warming events. Such events can damage higher plants exposed to warm, then returning cold, temperatures after snow melt, and it is not known how bryophytes and lichens, which are of considerable ecological importance in high-latitude ecosystems, are affected by such warming events. However, even physiological adaptations of these cryptogams to winter environments in general are poorly understood.
Here we describe findings from a novel field experiment that uses heating from infrared lamps and soil warming cables to simulate acute mid-winter warming events in a sub-Arctic heath. In particular, we report the growing season responses of the dominant lichen, Peltigera aphthosa, and bryophyte, Hylocomium splendens, to warming events in three consecutive winters.
While summertime photosynthetic performance of P. aphthosa was unaffected by the winter warming treatments, H. splendens showed significant reductions in net photosynthetic rates and growth rates (of up to 48% and 52%, respectively). Negative effects were evident already during the summer following the first winter warming event.
While the lichen develops without going through critical phenological stages during which vulnerable organs are produced, the moss has a seasonal rhythm, which includes initiation of growth of young, freeze-susceptible shoot apices in the early growing season; these might be damaged by breaking of dormancy during warm winter events.
Synthesis. Different sensitivities of the bryophyte and lichen species were unexpected, and illustrate that very little is known about the winter ecology of bryophytes and lichens from cold biomes in general. In sharp contrast to summer warming experiments that show increased vascular plant biomass and reduced lichen biomass, these results demonstrate that acute climate events in mid-winter may be readily tolerated by lichens, in contrast to previously observed sensitivity of co-occurring dwarf shrubs, suggesting winter climate change may compensate for (or even reverse) predicted lichen declines resulting from summer warming.
Winter warming
Contrasting sensitivity to extreme winter warming events of dominant sub‐Arctic heathland bryophyte and lichen species
2024-01-09 13:23:52.056842+00:00
https://doi.org/10.1016/j.jhydrol.2022.128593
2022-11-17 12:42:58.014321+00:00
2022-11-17 12:42:59.601045+00:00
Rain-on-snow (ROS) events can greatly affect the snow process and cause severe snowmelt-related hazards. It is important to monitor the spatiotemporal distribution of ROS events over the ungauged High Mountain Asia (HMA). This study investigated the spatiotemporal variability of ROS events over the HMA and its potential influencing factors from 1981 to 2020 based on stand-alone Noah-MP land surface model simulations forced by hourly HARv2 reanalysis dataset. The results demonstrated that ROS activity occurred more frequently in the higher-elevation (2500–4000 m and 5500–6000 m a.s.l) regions of the Tianshan Mountains, Pamir, eastern Hindu Kush, Himalayas, and the western Hengduan Shan, with an annual maximum ROS frequency exceeding 15 days and a maximum intensity reaching 40 mm concentrated in spring and summer. ROS frequency experienced a significant decrease in the high-elevation (3000–4500 m a.s.l) regions of the eastern Hindu Kush, West Himalaya, and western Hengduan Shan with a rate exceeding −1.5 days/decade. The decrease in ROS frequency could be explained by a shifting of precipitation type from snowfall to rain driven by dramatic warming and resulting in a decline in snowfall and shortened snow cover persistence, particularly in spring and summer. On the contrary, significantly increasing trend mainly prevailed in the high-elevation (5000–6000 m a.s.l) regions of Transhimalaya and East Himalaya, exceeding 0.9 days/decade.
Trends and spatial variations of rain-on-snow events over the high Mountain Asia
2022-11-17 12:42:58.014321+00:00
https://doi.org/10.2307/1550592
2023-04-05 15:02:43.479985+00:00
2023-04-05 15:02:46.070674+00:00
ABSTRACT
The origin of lichen-free areas in the High Arctic has been attributed to lichen-kill under permanent snowfields developed 300 yr ago during the Little Ice Age. There are inconsistencies in this hypothesis, particularly in regard to the manner of lichen-kill, the mechanism of dead lichen removal once the previously ice-covered ground is exposed again, the period when the lichen-kill occured, and the form of lichen trimlines. An alternative hypothesis is suggested whereby lichen-free areas occur where seasonal snowfields persist for a much greater part of the summer than elsewhere. As a result the lichen growth season there is very short.
lichen-kill
The Problem of Lichen-Free Zones in Arctic Canada
2023-04-05 15:02:43.479985+00:00
https://doi.org/10.5194/egusphere-egu23-2579
2023-05-06 08:25:46.657077+00:00
2023-05-06 08:25:47.523870+00:00
Summary submitted at EGU 2023.
Using FAIR and Open Science practices to better understand vegetation browning in Troms and Finnmark (Norway)
2023-05-06 08:25:46.657077+00:00
https://hess.copernicus.org/articles/23/2983/2019/hess-23-2983-2019.pdf
2023-04-05 12:52:29.688139+00:00
2023-04-05 12:52:36.003321+00:00
Abstract. Rain-on-snow (ROS) events in mountainous
catchments can cause enhanced snowmelt, leading to an increased risk of destructive winter floods. However, due to
differences in topography and forest cover, the generation of
snowpack outflow volumes and their contribution to streamflow are spatially and temporally variable during ROS events.
In order to adequately predict such flood events with hydrological models, an enhanced process understanding of the
contribution of rainwater and snowmelt to stream water is
needed.
application/pdf
rain-on-snow
Monitoring snowpack outflow volumes and their
isotopic composition to better understand streamflow
generation during rain-on-snow events
2023-04-05 12:52:29.688139+00:00
https://munin.uit.no/bitstream/handle/10037/28742/article.pdf?sequence=2
2023-04-05 15:35:11.553400+00:00
2023-04-05 15:36:09.779957+00:00
Abstract
Arctic ecosystems are increasingly exposed to extreme climatic events throughout the year, which can affect species performance. Cryptogams (bryophytes and lichens) provide important ecosystem services in polar ecosystems but may be physiologically affected or killed by extreme events. Through field and laboratory manipulations, we compared physiological responses of seven dominant sub-Arctic cryptogams (three bryophytes, four lichens) to single events and factorial combinations of mid-winter heatwave (6C for 7 days), re-freezing, snow removal and summer nitrogen addition. We aimed to identify which mosses and lichens are vulnerable to these abiotic extremes and if combinations would exacerbate physiological responses. Combinations of extremes resulted in stronger species responses but included idiosyncratic species-specific responses. Species that remained dormant during winter (March), irrespective of extremes, showed little physiological response during summer (August). However, winter physiological activity, and response to winter extremes, was not consistently associated with summer physiological impacts. Winter extremes affect cryptogam physiology, but summer responses appear mild, and lichens affect the photobiont more than the mycobiont. Accounting for Arctic cryptogam response
to multiple climatic extremes in ecosystem functioning and modelling will require a better understanding of their winter eco-physiology and repair capabilities.
application/pdf
winter heatwaves
Sub-arctic mosses and lichens show idiosyncratic responses to combinations of winter heatwaves, freezing and nitrogen deposition
2023-04-05 15:35:11.553400+00:00
https://onlinelibrary.wiley.com/doi/full/10.1111/gcb.14500
2023-05-12 06:52:53.437701+00:00
2023-05-12 06:52:57.978371+00:00
Abstract
Extreme climatic events are among the drivers of recent declines in plant biomass and productivity observed across Arctic ecosystems, known as “Arctic browning.” These events can cause landscape-scale vegetation damage and so are likely to have major impacts on ecosystem CO2 balance. However, there is little understanding of the impacts on CO2 fluxes, especially across the growing season. Furthermore, while widespread shoot mortality is commonly observed with browning events, recent observations show that shoot stress responses are also common, and manifest as high levels of persistent anthocyanin pigmentation. Whether or how this response impacts ecosystem CO2 fluxes is not known. To address these research needs, a growing season assessment of browning impacts following frost drought and extreme winter warming (both extreme climatic events) on the key ecosystem CO2 fluxes Net Ecosystem Exchange (NEE), Gross Primary Productivity (GPP), ecosystem respiration (Reco) and soil respiration (Rsoil) was carried out in widespread sub-Arctic dwarf shrub heathland, incorporating both mortality and stress responses. Browning (mortality and stress responses combined) caused considerable site-level reductions in GPP and NEE (of up to 44%), with greatest impacts occurring at early and late season. Furthermore, impacts on CO2 fluxes associated with stress often equalled or exceeded those resulting from vegetation mortality. This demonstrates that extreme events can have major impac
Arctic browning
CO2 fluxes
Arctic browning: Impacts of extreme climatic events on heathland ecosystem CO2 fluxes
2023-05-12 06:52:53.437701+00:00
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
https://raw.githubusercontent.com/j34ni/Vegetation_in_Troms_and_Finnmark/main/train_mooc_tp1n.ipynb
2023-03-26 12:00:45.352407+00:00
2023-04-12 19:21:53.527818+00:00
Jupyter Notebook for training, testing and validating machine learning method to forecast moss and lichen fractional cover mean. This Jupyter Notebook uses Python and Keras.
lichen
vegetation
Forecasting moss & lichen fractional cover mean with machine learning (Jupyter Notebook)
2023-03-26 12:00:45.352407+00:00
post@simula.no
00vn06n10
Simula Research Laboratory
01xtthb56
University of Oslo
10.13039/501100000780::101017501
REsearch LIfecycle mAnagemeNt for Earth Science Communities and CopErnicus users in EOSC
REsearch LIfecycle mAnagemeNt for Earth Science Communities and CopErnicus users in EOSC
10.13039/501100000780::101017529
Copernicus - eoSC AnaLytics Engine
Copernicus - eoSC AnaLytics Engine
0288fa88-80c3-42b1-b216-d2960bd74c21
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2022-10-12 06:10:37.319712+00:00
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2022-10-12 06:10:37.319712+00:00
In most places on the planet vegetation thrives, this is known as “greening Earth”. However in certain regions, especially in the Arctic, there are areas exhibiting a browning trend. Here we focus on the Troms and Finnmark counties in northern Norway to assess the extend of the phenomenon and any link with local environmental conditions.
application/ld+json
https://w3id.org/ro-id/3ed30e69-fb38-4045-bd34-2fa907d12353
climate change
vegetation
Jupyter Notebook
Vegetation browning in Troms and Finnmark (Norway)
MANUAL
http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
Iaquinta, Jean, and Anne Fouilloux. "Vegetation browning in Troms and Finnmark (Norway)." ROHub. Oct 12 ,2022. https://w3id.org/ro-id/3ed30e69-fb38-4045-bd34-2fa907d12353.
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output
input
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biblio
479567
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2022-10-12 06:26:48.984776+00:00
2022-10-12 06:31:25.352573+00:00
The State of the Arctic Terrestrial Biodiversity Report
(START) is a product of the Circumpolar Biodiversity
Monitoring Program (CBMP) Terrestrial Group of the
Arctic Council’s Conservation of Arctic Flora and Fauna
(CAFF) Working Group. The START assesses the status
and trends of terrestrial Focal Ecosystem Components
(FECs)—including vegetation, arthropods, birds, and
mammals—across the Arctic, identify gaps in monitoring
coverage towards implementation of the CBMP’s Arctic
Terrestrial Biodiversity Monitoring Plan; and provides
key findings and advice for monitoring. The START is
based upon primarily published data, from a special
issue of Ambio containing 13 articles by more than 180
scientists
application/pdf
biodiversity
vegetation
State of the Arctic terrestrial biodiversity report (2021) - Chapter 3.1 Vegetation
2022-10-12 06:26:48.984776+00:00
331751
https://api.rohub.org/api/resources/a2e38de7-7f8e-49b2-a6fd-3c1f27ef7eaa/download/
2022-10-19 11:13:39.470895+00:00
2022-10-19 11:13:41.588808+00:00
image/png
NDVI_Troms-Finnmark_2020-06-21.png
2022-10-19 11:13:39.470895+00:00
1596627
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2023-05-06 08:18:00.453706+00:00
2023-05-06 08:18:02.733117+00:00
Poster presented at EGU 2023 during the ESSI2.8
"HPC and cloud infrastructures in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO"
Convener: Vasileios Baousis | Co-conveners: Tina Odaka, Umberto Modigliani, Anne Fouilloux, Alejandro Coca-CastroECS
application/pdf
pdf
Poster (pdf) Using FAIR and Open Science practices to better understand vegetation browning in Troms and Finnmark (Norway)
2023-05-06 08:18:00.453706+00:00
9732705
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2023-05-06 08:22:45.806371+00:00
2023-09-26 08:23:49.594269+00:00
This poster shows the work done to estimate the loss in lichens & mosses in the arctic (arctic browning). ERA5 land data from ECMWF have been used to estimate the changes in vegetation. Poster in svg format that has been presented at EGU 2023 at session ESSI2.8 HPC and cloud infrastructures in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO
Convener: Vasileios Baousis | Co-conveners: Tina Odaka, Umberto Modigliani, Anne Fouilloux, Alejandro Coca-Castro
image/svg+xml
Poster (svg) Using FAIR and Open Science practices to better understand vegetation browning in Troms and Finnmark (Norway)
2023-05-06 08:22:45.806371+00:00
NICEST-2 - the second phase of the Nordic Collaboration on e-Infrastructures for Earth System Modeling focuses on strengthening the Nordic position within climate modeling by leveraging, reinforcing and complementing ongoing initiatives.
Nordic Collaboration on e-Infrastructures for Earth System Modeling Tools
https://w3id.org/ro-id/ed4e6aa2-9db8-452d-9301-ba1606361034
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
Finnmark Fylke
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earth
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county
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Vegetation browning in Troms and Finnmark (Norway). In most places on the planet vegetation thrives, this is known as “
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toasting
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geophysics
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brown in Troms
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greening Earth
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counties in northern Norway
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earth sciences
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https://www-nature-com.ezproxy.uio.no/articles/s43017-022-00298-5
2022-10-19 12:47:23.064683+00:00
2022-10-19 12:47:23.578988+00:00
Vegetation indices (VIs), which describe remotely sensed vegetation properties such as photosynthetic activity and canopy structure, are widely used to study vegetation dynamics across scales. However, VI-based results can vary between indices, sensors, quality control measures, compositing algorithms, and atmospheric and sun–target–sensor geometry corrections. These variations make it difficult to draw robust conclusions about ecosystem change and highlight the need for consistent VI application and verification. In this Technical Review, we summarize the history and ecological applications of VIs and the linkages and inconsistencies between them. VIs have been used since the early 1970s and have evolved rapidly with the emergence of new satellite sensors with more spectral channels, new scientific demands and advances in spectroscopy. When choosing VIs, the spectral sensitivity and features of VIs and their suitability for target application should be considered. During data analyses, steps must be taken to minimize the impact of artefacts, VI results should be verified with in situ data when possible and conclusions should be based on multiple sets of indicators. Next-generation VIs with higher signal-to-noise ratios and fewer artefacts will be possible with new satellite missions and integration with emerging vegetation metrics such as solar-induced chlorophyll fluorescence, providing opportunities for studying terrestrial ecosystems globally.
Vegetation indices
Optical vegetation indices for monitoring terrestrial ecosystems globally
2022-10-19 12:47:23.064683+00:00
https://www.sciencedirect.com/science/article/pii/S1873965213000455
2023-05-25 06:37:48.986995+00:00
2023-05-25 06:37:51.001310+00:00
Abstract
Droppings of Svalbard reindeer (Rangifer tarandus platyrhynchus) could affect the carbon and nitrogen cycles in tundra ecosystems. The aim of this study was to evaluate the potential of reindeer droppings originating from the winter diet for emission and/or absorption of methane (CH4) and nitrous oxide (N2O) in summer. An incubation experiment was conducted over 14 days using reindeer droppings and mineral subsoil collected from a mound near Ny-Ålesund, Svalbard, to determine the potential exchanges of CH4 and N2O for combinations of two factors, reindeer droppings (presence or absence) and soil moisture (dry, moderate, or wet). A line transect survey was conducted to determine the distribution density of winter droppings at the study site. The incubation experiment showed a weak absorption of CH4 and a weak emission of N2O. Reindeer droppings originating from the winter diet had a negligible effect on the exchange fluxes of both CH4 and N2O. Although the presence of droppings resulted in a short-lasting increase in N2O emissions on day 1 (24 h from the start) for moderate and wet conditions, the emission rates were still very small, up to 3 μg N2O m−2 h−1.
Reindeer
droppings
lichen
Potential of Svalbard reindeer winter droppings for emission/absorption of methane and nitrous oxide during summer
2023-05-25 06:37:48.986995+00:00
service-account-enrichment
http://doi.org/10.1109/IGARSS47720.2021.9553499
2022-09-21 22:55:46.631043+00:00
2022-10-24 19:29:19.972344+00:00
Related publication of the exploration presented in the Jupyter notebook
Global land use / land cover with Sentinel 2 and deep learning
2022-09-21 22:55:46.631043+00:00
Geography
Environmental research
https://doi.org/10.5281/zenodo.7101976
2022-09-21 22:55:41.737294+00:00
2022-10-24 19:29:21.719091+00:00
Contains outputs, (figures and tables), generated in the Jupyter notebook of Exploring Land Cover Data (Impact Observatory)
Outputs
2022-09-21 22:55:41.737294+00:00
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Lock conda file for linux-64
2022-09-23 08:45:49.944297+00:00
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2022-10-24 19:29:21.545610+00:00
Lock conda file for osx-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
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Lock conda file for win-64
2022-09-23 08:45:58.830681+00:00
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2022-09-21 22:55:36.625617+00:00
2022-10-24 19:29:18.858434+00:00
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Conda environment when user want to have the same libraries installed without concerns of package versions
Conda environment
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2023-05-16 18:17:59.954074+00:00
Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
2022-09-21 22:55:31.029870+00:00
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The research object refers to the Exploring Land Cover Data (Impact Observatory) notebook published in the Environmental Data Science book.
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Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book - fork
Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book
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http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
James Millington, Amandine Debus, and Anne Foilloux. "Exploring Land Cover Data (Impact Observatory) (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Sep 21 ,2022. https://w3id.org/ro-id/f5ad4964-2b27-40c4-9a99-ccf4170dcc76.
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image/png
Image showing interactive plot of global monthly precipitation mean computed from NCEP/NCAR reanalysis dataset
2022-09-21 22:55:23.004177+00:00
https://www.impactobservatory.com/static/lulc_methodology_accuracy-ee742a0a389a85a0d4e7295941504ac2.pdf
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Related publication of the exploration presented in the Jupyter notebook
application/pdf
Impact Observatory - Methodology & Accuracy Summary
2022-09-21 22:55:53.343618+00:00
University of Cambridge
aed58@cam.ac.uk
Amandine Debus
Nordic e-Infrastructure Collaboration (NeIC)
annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
King's College London
james.millington@kcl.ac.uk
James Millington
Raul Palma
service-account-enrichment
Applied sciences
Earth sciences
Earth observation
https://discourse.pangeo.io/t/discrete-global-grid-systems-dggs-use-with-pangeo/2274
2022-10-07 12:57:56.628114+00:00
2022-10-25 15:48:28.199436+00:00
Discussion from Pangeo Discourse on DGGS use with Pangeo.
discussion
Pangeo discourse on "Discrete Global Grid Systems (DGGS) use with Pangeo"
2022-10-07 12:57:56.628114+00:00
https://discourse.pangeo.io/t/october-6-2022-dggs-and-their-potential-impact-in-geoscience-and-geospatial-communities/2759
2022-10-25 15:45:23.831383+00:00
2022-10-25 15:48:40.680580+00:00
Pangeo discourse announcement.
discourse
Pangeo discourse announcement Show & Tell on
"October 6, 2022: DGGS and their potential impact in Geoscience and Geospatial communities"
2022-10-25 15:45:23.831383+00:00
https://github.com/allixender/pangeo_dggs_2022
2022-10-07 12:51:00.692996+00:00
2022-10-25 15:48:26.907094+00:00
Github repository with examples used during the Pangeo Show and Tell - 06. Oct., 2022 on "DGGS and their potential impact in Geoscience and Geospatial" by Alexander Kmoch (Landscape Geoinformatics Lab, University of Tartu, Estonia).
Twitter:
@Lgeoinformatics │ @allixender
jupyter notebook
Pangeo Show and Tell : DGGS play ground
2022-10-07 12:51:00.692996+00:00
https://hackmd.io/@pangeo/showandtell
2022-10-25 07:27:19.067533+00:00
2022-10-25 15:48:28.394740+00:00
This is the shared document we use for all the Pangeo Show and Tell. We collect information, Q&A and feedback.
Each Show and Tell has its own sub-section.
hackmd
HackMD Pangeo Show and Tell
2022-10-25 07:27:19.067533+00:00
University of Tartu, Estonia
alexander.kmoch@ut.ee
Alexander Kmoch
0000-0003-4386-4450
https://raw.githubusercontent.com/allixender/pangeo_dggs_2022/main/environment.yml
2022-10-17 14:04:26.842481+00:00
2022-10-25 15:48:24.056839+00:00
Conda environment for running DGGS notebook examples.
environment
environment.yml
2022-10-17 14:04:26.842481+00:00
https://raw.githubusercontent.com/allixender/pangeo_dggs_2022/main/h3_intro.ipynb
2022-10-17 14:07:52.027331+00:00
2022-10-25 15:48:40.921243+00:00
Jupyter Notebook demonstrating how to perform Spatial Data Analysis with H3.
H3
h3_intro.ipynb
2022-10-17 14:07:52.027331+00:00
post@simula.no
00vn06n10
Simula Research Laboratory
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
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2022-10-04 09:22:53.114240+00:00
A Discrete Global Grid Systems (DGGS) is a unique type of spatial
reference system comprising of a hierarchy of uniquely identifiable
discrete grid cells that span the globe at multiple resolutions. A DGGS
can support efficient management, storage, integration, exploration,
mining, and visualisation of large geospatial datasets, and several
systems of tesselation and indexing schemes exist.
The main topic of this session is to introduce the audience to the
theoretical background of Discrete Global Grid Systems (DGGS), current
real-world implementations and exemplary use cases. This includes grid
generation, data indexing and sampling with DGGRID, and some spatial
analysis with with H3 and rHealPix.
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DGGS
OGC
grid
DGGS and their potential impact in Geoscience and Geospatial communities - snapshot
DGGS and their potential impact in Geoscience and Geospatial communities
MANUAL
http://w3id.org/ro/earth-science#ExecutableResearchObjectTemplate
Kmoch, Alexander, and Pangeo Europe. "DGGS and their potential impact in Geoscience and Geospatial communities." ROHub. Oct 04 ,2022. https://doi.org/10.24424/tg01-kv33.
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Slides for the presentation on DGGS given during Pangeo Show and Tell October 6, 2022 by Alex Kmoch.
application/pdf
pdf
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DGGS and their potential impact in Geoscience and Geospatial (pdf presentation)
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A Discrete Global Grid System is a spatial reference system that uses a hierarchical tessellation of cells to partition and address the globe.
OGC Abstract Specification, 2017
image/png
Discrete Global Grid System (DGGS)
2022-10-07 13:02:09.118273+00:00
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A Discrete Global Grid Systems (DGGS) is a unique type of spatial
reference system comprising of a hierarchy of uniquely identifiable
discrete grid cells that span the globe at multiple resolutions.
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theoretical background of Discrete Global Grid Systems (DGGS), current
real-world implementations and exemplary use cases.
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https://youtu.be/kkLRtyZtxs0
2022-10-25 07:25:21.367265+00:00
2022-10-25 15:48:20.916495+00:00
This YouTube video is part of the Pangeo Show & Tell series and was given on October 6 2022 by Alexander Kmoch, Department of Geography of the University of Tartu, (Estonia).
show&tell
youtube
YouTube video "DGGS and their potential impact in Geoscience and Geospatial communities"
2022-10-25 07:25:21.367265+00:00
pangeo.europe@gmail.com
Pangeo Europe
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https://210507-004.oceansvirtual.com/view/content/skdwP611e3583eba2b/ecf65c2aaf278557ad05c213247d67a54196c9376a0aed8f1875681f182daeed
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Related publication of the modelling published in OCEANS 2021
Detecting macro floating objects on coastal water bodies using sentinel-2 data
2022-01-28 16:07:40.875698+00:00
https://doi.org/10.5194/isprs-annals-V-3-2021-285-2021
2022-01-28 16:07:43.339740+00:00
2022-10-27 21:00:10.761926+00:00
Publication with further details of the modelling published in ISPRS Annals of the Photogrammetry, Remote Sensing and Spatial Information Sciences
Towards detecting floating objects on a global scale with learned spatial features using sentinel 2
2022-01-28 16:07:43.339740+00:00
https://doi.org/10.5281/zenodo.5827376
2022-01-28 16:07:34.662177+00:00
2022-10-27 21:00:06.699231+00:00
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2022-01-28 16:07:34.662177+00:00
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2022-01-28 16:07:38.160206+00:00
2022-10-27 21:00:18.581833+00:00
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2022-01-28 16:07:38.160206+00:00
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Related publication of the exploration presented in the Jupyter notebook
Global land use / land cover with Sentinel 2 and deep learning
2022-09-21 22:55:46.631043+00:00
Geography
Environmental research
https://doi.org/10.5281/zenodo.7101976
2022-09-21 22:55:41.737294+00:00
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2023-09-26 15:18:12.263952+00:00
Area under mesophotic light conditions in the Mediterranean Sea
biodiversity
mesophotic zone
satellite data
seabottom
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2023-09-26 15:17:43.943668+00:00
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2023-06-08 11:21:31.354336+00:00
2023-09-26 15:23:27.247536+00:00
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2022-11-14 16:37:19.582440+00:00
2022-11-14 16:37:20.855758+00:00
Castellan, G., Angeletti, L., Montagna, P. et al. Drawing the borders of the mesophotic zone of the Mediterranean Sea using satellite data. Sci Rep 12, 5585 (2022).
Drawing the borders of the mesophotic zone of the Mediterranean Sea using satellite data
2022-11-14 16:37:19.582440+00:00
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Estimating the penetration of light along the water column from satellite data to map the photic zone in the Mediterranean Sea
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Amount of light reaching the seabed according to the model in Castellan et al. 2022
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Preview - Area under mesophotic light conditions in the Mediterranean Sea
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Working paper or preprint, September 2022.
Multi-compartmental model of glymphatic clearance of solutes in brain tissue.
2022-11-26 16:11:07.067393+00:00
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Jupyter Notebook showing the findings presented in the paper.
Multicompartment in the mouse brain (Jupyter Notebook)
2022-11-26 16:16:11.605317+00:00
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This Research Object contains links to the paper, source code, etc. for the simulations presented in the paper "Multi-compartmental model of glymphatic clearance of solutes in brain tissue" by Poulain, Riseth and Vinje. For now it contains only a minimal working example for running the simulations, but will be reorganized to be more accessible and more easily extended in the near future.
Summary of the paper: the Glymphatic system is the subject of numerous pieces of research in Biology. Mathematical modeling plays a considerable role in this field since it can indicate the possible physical effects in this system and validate the biologists' hypotheses. The available mathematical models that describe the system at the scale of the brain (i.e. the macroscopic scale) are often solely based on the diffusion equation and do not consider the fine structures formed by the perivascular spaces. We therefore propose a mathematical model representing the time and space evolution of a mixture flowing through multiple compartments of the brain. We adopt a macroscopic point of view in which the compartments are all present at any point in space. The equations system is composed of two coupled equations for each compartment: One equation for the pressure of a fluid and one for the mass concentration of a molecule. The fluid and solute can move from one compartment to another according to certain membrane conditions modeled by transfer functions. We propose to apply this new modeling framework to the clearance of 14 C-inulin from the rat brain.
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Dokken, Jørgen Schartum, Jørgen Riseth, Vegard Vinje, and Anne Foilloux. "MultiCompartment Solute Transport." ROHub. Nov 26 ,2022. https://w3id.org/ro-id/e7f90fc2-ddcb-4369-9f31-b81123b40533.
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Integration of data on Air and Water quality in the Venice Lagoon to assess the impact of the Covid-19 Lockdown
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-12-05 17:47:54.631415+00:00
https://doi.org/10.5281/zenodo.5516869
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2022-12-05 17:48:47.659880+00:00
https://doi.org/10.5281/zenodo.6410246
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Jupyter Notebook hosted by the Environmental Data Science Book and exemplifying the use of IceNet, a probabilistic deep learning algorithm to compute seasonal sea-ice forecasts over the Arctic.
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https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
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Nick Barlow
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service-account-enrichment
Environmental research
Climatology
https://doi.org/10.1038/s41467-021-25257-4
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
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Contains input Dataset for IceNet's demo notebook used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Dataset for IceNet's demo notebook
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https://doi.org/10.5281/zenodo.6410246
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Contains outputs, (table and figures), generated in the Jupyter notebook of Sea ice forecasting using IceNet
Outputs
2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
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The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book. Modelling approach IceNet is a probabilistic, deep learning sea ice forecasting system. The model, an ensemble of U-Net networks, learns how sea ice changes from climate simulations and observational data to forecast up to 6 months of monthly-averaged sea ice concentration maps at 25 km resolution. IceNet advances the range of accurate sea ice forecasts, outperforming a state-of-the-art dynamical model in seasonal forecasts of summer sea ice, particularly for extreme sea ice events. IceNet was implemented in Python 3.7 using TensorFlow v2.2.0. Further details can be found in the Nature Communications paper Seasonal Arctic sea ice forecasting with probabilistic deep learning.
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
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https://doi.org/10.5281/zenodo.6410246
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2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
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Input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning'
2022-04-03 22:38:14.669821+00:00
https://github.com/Environmental-DS-Book/polar-modelling-icenet/blob/main/.lock/conda-linux-64.lock
2022-04-03 22:38:32.938456+00:00
2022-12-07 14:10:25.591794+00:00
Lock conda file for linux-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for linux-64
2022-04-03 22:38:32.938456+00:00
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2022-04-03 22:38:34.714518+00:00
2022-12-07 14:10:31.124812+00:00
Lock conda file for osx-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
Lock conda file for osx-64
2022-04-03 22:38:34.714518+00:00
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
https://raw.githubusercontent.com/Environmental-DS-Book/polar-modelling-icenet/main/.binder/environment.yml
2022-04-03 22:38:36.253117+00:00
2022-12-07 14:10:27.178785+00:00
Conda environment when user want to have the same libraries installed without concerns of package versions
Conda environment
2022-04-03 22:38:36.253117+00:00
https://raw.githubusercontent.com/eds-book-gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/main/notebook.ipynb
2022-04-03 22:38:13.405158+00:00
2023-05-16 17:58:38.982476+00:00
Jupyter Notebook hosted by the Environmental Data Science Book
Jupyter notebook
2022-04-03 22:38:13.405158+00:00
post@simula.no
00vn06n10
Simula Research Laboratory
01xtthb56
University of Oslo
https://the-environmental-ds-book.netlify.app/gallery/modelling/polar-modelling-icenet/polar-modelling-icenet.html
2022-04-03 22:38:31.388108+00:00
2022-12-07 14:10:27.395338+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
text/html
Online rendered version of the Jupyter notebook
2022-04-03 22:38:31.388108+00:00
2022-12-07 14:10:33.478638+00:00
12846411
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2022-04-03 22:37:45.977506+00:00
2025-10-18 10:49:31.245781+00:00
2022-04-03 22:37:45.977506+00:00
The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book. Modelling approach IceNet is a probabilistic, deep learning sea ice forecasting system. The model, an ensemble of U-Net networks, learns how sea ice changes from climate simulations and observational data to forecast up to 6 months of monthly-averaged sea ice concentration maps at 25 km resolution. IceNet advances the range of accurate sea ice forecasts, outperforming a state-of-the-art dynamical model in seasonal forecasts of summer sea ice, particularly for extreme sea ice events. IceNet was implemented in Python 3.7 using TensorFlow v2.2.0. Further details can be found in the Nature Communications paper Seasonal Arctic sea ice forecasting with probabilistic deep learning.
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Environmental Science
Jupyter Notebook
Learn about IceNet, a probabilistic Deep learning for seasonal sea-ice forecasts
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book - fork
MANUAL
Alejandro Coca-Castro, Anne Foilloux, Tom Andersson, Nick Barlow, and Jean Iaquinta. "Learn about IceNet, a probabilistic Deep learning for seasonal sea-ice forecasts." ROHub. Apr 03 ,2022. https://w3id.org/ro-id/b0a8864e-415d-42e3-972f-bb66c6d6a4d9.
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2022-12-07 15:21:40.547786+00:00
2022-12-07 15:21:42.318330+00:00
Figure showing the 2 meter temperature from ECMWF ERA5 (monthly mean September to November 2019)
image/png
ERA5-T2M
2022-12-07 15:21:40.547786+00:00
344731
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2022-12-07 14:10:33.107828+00:00
image/png
Image showing interactive plot of IceNet seasonal forecasts of Artic sea ice according to four lead times and months in 2020
2022-04-03 22:38:08.092594+00:00
20240021
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2022-12-07 15:23:15.811856+00:00
2022-12-07 15:23:18.303106+00:00
Derivative work created from forked Research Object. The Jupyter Notebook has been updated
icenet derivative work
2022-12-07 15:23:15.811856+00:00
Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
Learn about IceNet, a probabilistic Deep learning for seasonal sea-ice forecasts.
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IceNet advances the range of accurate sea ice forecasts, outperforming a state-of-the-art dynamical model in seasonal forecasts of summer sea ice, particularly for extreme sea ice events.
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annefou@geo.uio.no
Anne Fouilloux
0000-0002-1784-2920
environmental.ds.book@gmail.com
Environmental Data Science Book Community
The Alan Turing Institute
Alejandro Coca-Castro
The Alan Turing Institute
Nick Barlow
he British Antarctic Survey
Tom Andersson
Raul Palma
service-account-enrichment
Environmental research
Applied sciences
Earth sciences
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2023-01-08 19:37:15.986538+00:00
2023-01-08 19:37:17.137555+00:00
Data at the Acqua Alta oceanographic tower is a collection of physical and biogeochemical observation in the northern Adriatic Sea https://www.comune.venezia.it/it/content/3-piattaforma-ismar-cnr http://www.ismar.cnr.it/infrastrutture/piattaforma-acqua-alta
PTF dataset(2009-2020) Piattaforma acqua allta
2023-01-08 19:37:15.986538+00:00
https://doi.org/10.1016%2Fj.marpolbul.2021.112124
2023-01-08 19:24:00.526730+00:00
2023-01-08 19:24:45.110405+00:00
Reduction in the impact of human-induced factors is capable of enhancing the environmental health. In view of COVID-19 pandemic, lockdowns were imposed in India. Travel, fishing, tourism and religious activities were halted, while domestic and industrial activities were restricted. Comparison of the pre- and post-lockdown data shows that water parameters such as turbidity, nutrient concentration and microbial levels have come down from pre- to post-lockdown period, and parameters such as dissolved oxygen levels, phytoplankton and fish densities have improved. The concentration of macroplastics has also dropped from the range of 138 ± 4.12 and 616 ± 12.48 items/100 m2 to 63 ± 3.92 and 347 ± 8.06 items/100 m2. Fish density in the reef areas has increased from 406 no. 250 m−2 to 510 no. 250 m−2. The study allows an insight into the benefits of effective enforcement of various eco-protection regulations and proper management of the marine ecosystems to revive their health for biodiversity conservation and sustainable utilization.
Reef fish
covid-19
lockdown
plastic pollution
COVID-19 lockdown improved the health of coastal environment and enhanced the population of reef-fish
2023-01-08 19:24:00.526730+00:00
https://earthobservatory.nasa.gov/images/83394/parting-the-sea-to-save-venice
2023-01-08 19:58:47.516622+00:00
2023-01-08 19:58:48.541547+00:00
The natural-color Landsat images above show some of the MOSE engineering efforts that are visible above the water line near the Lido Inlet. The top image was acquired on June 20, 2000, by the Enhanced Thematic Mapper+ on Landsat 7. The second image, from the Operational Land Imager on Landsat 8, was collected on September 4, 2013. Turn on the image comparison tool to make the changes easier to see. (Note that Landsat 8 has a greater dynamic range than Landsat 7, so the Landsat 8 image is crisper the Landsat 7 image.)
Parting the Sea to Save Venice
2023-01-08 19:58:47.516622+00:00
giorgio.castellan@bo.ismar.cnr.it
Giorgio Castellan
0000-0001-6084-1504
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
federica.foglini@ismar.cnr.it
Federica Foglini
0000-0002-2736-0052
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
CNR-ISMAR
malek.belgacem@ve.ismar.cnr.it
Malek Belgacem
0000-0003-0745-4155
https://reliance.adamplatform.eu/?dataset=69623:EU_CAMS_SURFACE_NO2_G
2023-01-08 19:40:14.176174+00:00
2023-01-08 19:40:15.144502+00:00
CAMS NITROGEN DIOXIDE
2022-12-27T23:00:00Z
NO2
CAMS European air quality forecasts: NO2
2023-01-08 19:40:14.176174+00:00
2018-07-12T00:00:00Z
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2023-01-08 19:41:17.789149+00:00
2023-01-08 19:41:19.230215+00:00
CAMS OZONE
2022-12-27T23:00:00Z
O3
CAMS European air quality forecasts: O3
2023-01-08 19:41:17.789149+00:00
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Float32
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2023-01-08 19:42:25.690080+00:00
2023-01-08 19:42:26.703885+00:00
CAMS SURFACE PARTICULATE METTER D<2.5
2022-12-27T23:00:00Z
PM2.5
CAMS European air quality forecasts: PM25
2023-01-08 19:42:25.690080+00:00
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post@simula.no
00vn06n10
Simula Research Laboratory
https://w3id.org/ro-id/0869e396-3733-4aff-8fb2-94c8937b28aa
2023-01-08 19:15:20.212877+00:00
2023-01-08 19:15:21.730870+00:00
This is a case study of snapshot project http://snapshot.cnr.it/ to investigate the lockdown impact on the water quality at a selected site in the northern Adriatic Sea, precisely in Northern Adriatic Sea, the case of the Gulf of Venice using Machine Learning model.
Snapshot 2021 study case: Lockdown impacts on the Northern Adriatic Sea at selected site: AcquaAlta Platform Water quality
2023-01-08 19:15:20.212877+00:00
https://w3id.org/ro-id/53aa90bf-c593-4e6d-923f-d4711ac4b0e1
2023-01-08 19:14:03.311972+00:00
2023-01-08 19:14:05.880278+00:00
The COVID-19 pandemic has led to significant reductions in economic activity, especially during lockdowns. Several studies has shown that the concentration of nitrogen dioxyde and particulate matter levels have reduced during lockdown events. Reductions in transportation sector emissions are most likely largely responsible for the NO2 anomalies. In this study, we analyze the impact of lockdown events on the air quality using data from Copernicus Atmosphere Monitoring Service over Europe and at selected locations.
Impact of the Covid-19 Lockdown on Air quality over Europe
2023-01-08 19:14:03.311972+00:00
https://w3id.org/ro-id/53aa90bf-c593-4e6d-923f-d4711ac4b0e1/resources/2a2b6f01-be2e-414e-af08-d882aa995a71
2023-01-08 19:21:48.221333+00:00
2023-01-08 19:21:49.326505+00:00
In order to fight against the spread of COVID-19, the most hard-hit countries in the spring of 2020 implemented different lockdown strategies. To assess the impact of the COVID-19 pandemic lockdown on air quality worldwide, Air Quality Index (AQI) data was used to estimate the change in air quality in 20 major cities on six continents. Our results show significant declines of AQI in NO2, SO2, CO, PM2.5 and PM10 in most cities, mainly due to the reduction of transportation, industry and commercial activities during lockdown. This work shows the reduction of primary pollutants, especially NO2, is mainly due to lockdown policies. However, preexisting local environmental policy regulations also contributed to declining NO2, SO2 and PM2.5 emissions, especially in Asian countries. In addition, higher rainfall during the lockdown period could cause decline of PM2.5, especially in Johannesburg. By contrast, the changes of AQI in ground-level O3 were not significant in most of cities, as meteorological variability and ratio of VOC/NOx are key factors in ground-level O3 formation.
Impact of the COVID-19 Pandemic Lockdown on Air Quality Pollution in 20 Major cities around the World
2023-01-08 19:21:48.221333+00:00
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2023-01-08 18:47:51.996769+00:00
In this study, we focusing on understanding changes in air and water quality during the Covid-19 lockdown in the Venice Lagoon. We are re-using existing Research Objects, and in particular Jupyter Notebooks that were created in previous studies.
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water
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Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne, Federica Foglini, Giorgio Castellan, Malek Belgacem, Jean Iaquinta, and Simone Mantovani. "Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon." ROHub. Jan 08 ,2023. https://w3id.org/ro-id/998dccd6-7192-4d88-af39-6018c71e6bdf.
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input
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2023-12-06 19:29:13.115843+00:00
## Description
Jupyter Notebook to analyse the changes in NO2 during the Covid-19 Lockdown in the Venice Lagoon. Datasets are from Copernicus Atmosphere Monitoring Forecasts and in-situ measurement for water quality.
Impact of the Covid-19 Lockdown on Air and Water quality in the Venice Lagoon.ipynb
2023-12-06 19:20:08.956858+00:00
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2023-12-06 19:46:51.083430+00:00
image/png
water-quality-Venice_lagoon_2010-2020.png
2023-12-06 19:46:49.229830+00:00
46709
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2023-01-08 19:35:05.569853+00:00
2023-01-08 19:35:10.195993+00:00
Dataset shows monthly values and error bars.
image/png
Water quality in the Venice Lagoon between 2010 and 2020.
2023-01-08 19:35:05.569853+00:00
162243
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2023-12-06 19:45:26.207657+00:00
2023-12-06 19:46:05.707407+00:00
Compare air quality and water quality in the Venice Lagoon for two different dates.
image/png
Air quality and Water quality in the Venice Lagoon between 2010 and 2020.png
2023-12-06 19:45:26.207657+00:00
63516
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2023-01-08 20:22:56.960407+00:00
2023-01-08 20:23:20.887428+00:00
Bar plot showing NO2 averaged between March and June for 2019 and 2020. The goal is to compare values before and during the covid-19 lockdown.
NO2
NO2 Copernicus Air Quality forecasts for March-June 2019-2020
2023-01-08 20:22:56.960407+00:00
39986
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2023-01-08 20:25:23.565475+00:00
2023-01-08 20:25:50.602797+00:00
The goal is to compare values of NO2 water quality before and during the covid-19 lockdown.
NO2
NO2 water quality in the Venice lagoon between March-June 2019 and 2020.
2023-01-08 20:25:23.565475+00:00
https://w3id.org/ro-id/c2c64bf9-7625-4442-9ca9-dcd978b1d38b
2023-01-08 19:19:35.675216+00:00
2023-01-08 19:19:37.507930+00:00
Integration of data on Air and Water quality in the Venice Lagoon to assess the impact of the Covid-19 Lockdown
Impact of the Covid-19 Lockdown on Air and Water quality in the Venice Lagoon
2023-01-08 19:19:35.675216+00:00
The main interest is upon marine litter pollution and in particular ranging from marco to mirco and nano size. In encompasses data from citizen science monitoring and sampling activities in cooperation with research-educational institute and centers.
segreteria@plasticfreevenice.org
Marine Litter and plastics pollution
NICEST-2 - the second phase of the Nordic Collaboration on e-Infrastructures for Earth System Modeling focuses on strengthening the Nordic position within climate modeling by leveraging, reinforcing and complementing ongoing initiatives.
Nordic Collaboration on e-Infrastructures for Earth System Modeling Tools
https://w3id.org/ro-id/ed4e6aa2-9db8-452d-9301-ba1606361034
False
2023-02-19 13:23:07.855375+00:00
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air pollution
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Australia
study
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London
world s major cities
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Keywords: COVID ; AQI; lockdown policy; major cities; NO ; PM . ; ozone
.
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Sydney
Venice Venice Lagoon
31.192052980132452
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Thus, in order to provide a more comprehensive analysis ofthe impact of lockdowns on all critical air pollutants during the entire lockdown period and to assessthe impact of different lockdown strategies on air pollution, AQI in major cities worldwide wasexamined.
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World Health Organization
Turkey
medicine
14.795918367346937
2.9
computer science
19.387755102040813
3.8
air quality index
3.8847664775207336
8.9
social and information sciences
68.58537549936264
0.658052384853363
Los Angeles
3.186381492797905
7.3
research
8.681245858184228
13.1
toan air quality index
1.9867549668874172
3.0
study
3.753819292885203
8.6
Seoul
World Meteorological Organization
earth sciences
54.63797800317049
0.9944986701011658
pollutant discharge
1.5894039735099337
2.4
Mar
5.301524188204109
8.0
ecology
42.3469387755102
8.3
Africa
Paris
big city
5.019642077695329
11.5
International Agency for Research on Cancer
Iran
Mexico City
Mexico City Mexico Mar
3.1788079470198674
4.8
research
5.063291139240507
11.6
pollutant
3.1146454605699136
4.7
Japan
Moscow
Venice
7.333042339589699
16.8
Lima
Germany
The World air quality project
2.384105960264901
3.6
Tehran
United Kingdom
South Korea
geophysics
31.414624500637366
0.3014121949672699
lockdown
2.6507620941020544
4.0
Madrid
air quality
5.019642077695329
11.5
Sao Paulo Brazil Mar
1.6556291390728477
2.5
February
2.3134002618943694
5.3
Johannesburg
Venice
India
covid
2.253147779986746
3.4
World s air pollution
2.119205298013245
3.2
research object
21.52317880794702
32.5
Wuhan
water quality
15.904572564612325
24.0
pollution
2.6625927542557837
6.1
We are re-using existing Research Objects, and in particular Jupyter Notebooks that were created in previous studies.
19.011725293132326
22.7
geology
45.36202199682951
0.8256614208221436
To assess the impact of the COVID pandemiclockdown on air quality worldwide, Air Quality Index (AQI) data was used to estimate the changein air quality in major cities on six continents.
8.793969849246231
10.5
Venice Lagoon
10.603048376408218
16.0
data
2.793539938891314
6.4
Air pollution
Environment/Environmental pollution/Air pollution
Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon.
21.1892797319933
25.3
aim
3.7101702313400264
8.5
Claremont
May
2.618943692710607
6.0
geosciences
31.414624500637366
0.3014121949672699
Environmental pollution
Environment/Environmental pollution
lockdown
7.289393278044522
16.7
air quality
3.7773359840954273
5.7
Asia
South America
Peru
Madrid Spain Mar May TotalOutdoorphysicalexercise
3.576158940397351
5.4
Jupyter Notebooks
6.096752816434724
9.2
Venice
7.090788601722995
10.7
Tehran Iran Mar Apr TotalShops
2.185430463576159
3.3
understanding
2.5316455696202533
5.8
AQI
3.7773359840954273
5.7
availablefor Los Angeles
3.443708609271523
5.2
New York
3.4482758620689657
7.9
In this study, we focusing on understanding changes in air and water quality during the Covid-19 lockdown in the Venice Lagoon.
43.46733668341708
51.9
water quality
9.602793539938892
22.0
France
lockdown data
1.5231788079470197
2.3
Delhi
Weather
Weather
Rome
changes in air and water quality
10.927152317880795
16.5
lockdown lockdown Policy
2.052980132450331
3.1
Los Angeles
2.8495692511597084
4.3
Berlin
object
6.428098078197481
9.7
Mexico
New York
earth sciences
45.36202199682951
0.8256614208221436
Los Angeles
lockdown strategy
1.390728476821192
2.1
New York
3.180914512922465
4.8
Environmental Protection Agency
Russia
Los Angeles U.S.A Mar
2.119205298013245
3.2
Istanbul
Mexico City
3.3173286774334354
7.6
Antarctica
Europe
China
Spain
data
2.1206096752816435
3.2
Mexico City
2.982107355864811
4.5
covid pandemic lockdown
1.8543046357615893
2.8
March
5.674378000872982
13.0
United States of America
air pollution
4.539502400698385
10.4
Brazil
South Africa
documentation and information science
68.58537549936264
0.658052384853363
https://zenodo.org/record/7513765/files/NO2_EUROPE_ADAMAPI2019-03-01_2021-06-30.nc
2023-01-08 19:38:36.937507+00:00
2023-01-08 19:38:38.878326+00:00
NO2 CAMS over Europe March-June 2019, 2020 and 2021 extracted from ADAM data cube.
application/x-netcdf
NO2
NO2 CAMS over Europe March-June 2019, 2020 and 2021
2023-01-08 19:38:36.937507+00:00
Anne Fouilloux
mantovani@meeo.it
Simone Mantovani
Raul Palma
service-account-enrichment
Applied sciences
https://github.com/aduvenhage/ais-decoder
2023-02-06 11:33:34.154427+00:00
2023-02-06 11:33:35.475411+00:00
Library used for decoding AIS messages.
ais
ais-decoder
2023-02-06 11:33:34.154427+00:00
https://github.com/annefou/nmea2hdf5.git
2023-02-08 11:04:52.383251+00:00
2023-02-08 11:07:36.079726+00:00
Source code for NMEA decoding and storing into HDF5.
AIS NMEA messages to HDF5 source code (Github)
2023-02-08 11:04:52.383251+00:00
Simula Research Laboratory
dokken@simula.no
Jørgen Schartum Dokken
0000-0001-6489-8858
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
Simula Research Laboratory
roehr@simula.no
Thomas Roehr
https://raw.githubusercontent.com/annefou/nmea2hdf5/main/ais_metadata.yaml
2023-02-08 10:58:44.521769+00:00
2023-02-08 10:58:46.208307+00:00
YAML file containing metadata information for converting this nmea input dataset into HDF5
yaml
ais_metadata.yaml
2023-02-08 10:58:44.521769+00:00
https://raw.githubusercontent.com/annefou/nmea2hdf5/main/binder/requirements.txt
2023-02-06 10:02:32.838210+00:00
2023-02-06 10:02:34.214056+00:00
requirements.txt files for Python dependencies.
text/plain
dependency
requirements.txt
2023-02-06 10:02:32.838210+00:00
https://raw.githubusercontent.com/annefou/nmea2hdf5/main/binder/runtime.txt
2023-02-08 11:00:16.238503+00:00
2023-02-08 11:01:18.954567+00:00
runtime info for binder
text/plain
runtime
runtime.txt
2023-02-08 11:00:16.238503+00:00
https://raw.githubusercontent.com/annefou/nmea2hdf5/main/convert_AIS_nmea_to_HDF5.ipynb
2023-02-06 10:00:14.715009+00:00
2023-02-06 10:00:16.467498+00:00
This Jupyter Notebook shows how to decode AIS name messages and create an HDF5 output for future processing.
AIS
jupyter
Jupyter Notebook for decoding AIS nmea messages
2023-02-06 10:00:14.715009+00:00
post@simula.no
00vn06n10
Simula Research Laboratory
29d5d3c2-f780-40e7-9a05-52bebde86287
POLYGON ((-166.17190361022952 -79.97679216797611, -166.17190361022952 84.90755977186335, 191.71872138977054 84.90755977186335, 191.71872138977054 -79.97679216797611, -166.17190361022952 -79.97679216797611))
POLYGON ((-166.17190361022952 -79.97679216797611, -166.17190361022952 84.90755977186335, 191.71872138977054 84.90755977186335, 191.71872138977054 -79.97679216797611, -166.17190361022952 -79.97679216797611))
-166.17190361022952 -79.97679216797611, -166.17190361022952 84.90755977186335, 191.71872138977054 84.90755977186335, 191.71872138977054 -79.97679216797611, -166.17190361022952 -79.97679216797611
2062762
https://api.rohub.org/api/ros/d69df778-182b-4a58-b948-9e22073a7671/crate/download/
2023-02-06 09:26:09.826137+00:00
2025-10-18 10:05:05.974134+00:00
2023-02-06 09:26:09.826137+00:00
Read name AIS messages, decode and store the results in an HDF5 file to improve interoperability.
application/ld+json
https://w3id.org/ro-id/d69df778-182b-4a58-b948-9e22073a7671
AIS
Automatic Identification System
nmea
Jupyter Notebook
Decode AIS nmea messages to HDF5
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne, Jørgen Schartum Dokken, and Thomas Roehr. "Decode AIS nmea messages to HDF5." ROHub. Feb 06 ,2023. https://w3id.org/ro-id/d69df778-182b-4a58-b948-9e22073a7671.
POLYGON ((-166.17190361022952 -79.97679216797611, -166.17190361022952 84.90755977186335, 191.71872138977054 84.90755977186335, 191.71872138977054 -79.97679216797611, -166.17190361022952 -79.97679216797611))
tool
biblio
output
input
2036935
https://api.rohub.org/api/resources/7d9ba129-a730-4f16-a46b-832c8dcbdb9a/download/
2023-02-06 09:57:33.839678+00:00
2023-02-06 11:31:34.389536+00:00
plot showing location of AIS messages from input dataset.
image/png
vais-nmea_example.png
2023-02-06 09:57:33.839678+00:00
name AIS message
80.55555555555556
78.3
AIS message
4.732510288065843
4.6
nmea message
2.3662551440329214
2.3
engineering
100.0
0.7212785482406616
interoperability
10.976837865055389
10.9
communications and radar
100.0
0.7212785482406616
AIS
32.98647242455775
31.7
Decode AIS nmea messages to HDF5.
35.73573573573574
35.7
file
15.400624349635796
14.8
Read name AIS messages, decode and store the results in an HDF5 file to improve interoperability.
64.26426426426426
64.2
outcome
3.4239677744209467
3.4
results in an HDF5 file
1.2345679012345678
1.2
name
8.66062437059416
8.6
artificial immune system
31.419939577039276
31.2
message
31.00936524453694
29.8
computer science
100.0
34.6
name
8.740894901144642
8.4
atmospheric sciences
100.0
0.920569658279419
interoperability
11.86264308012487
11.4
AIS nmea message
11.11111111111111
10.8
earth sciences
100.0
0.920569658279419
message
29.60725075528701
29.4
file
15.911379657603224
15.8
https://zenodo.org/record/7611498/files/nmea-sample.txt
2023-02-06 11:24:44.113594+00:00
2023-02-06 11:32:01.920077+00:00
AIS nmea messages used for testing purposes.
Examples:
```
!AIVDM,1,1,,A,13HOI:0P0000VOHLCnHQKwvL05Ip,0*23
!AIVDM,1,1,,A,133sVfPP00PD>hRMDH@jNOvN20S8,0*7F
!AIVDM,1,1,,B,100h00PP0@PHFV`Mg5gTH?vNPUIp,0*3B
!AIVDM,1,1,,B,13eaJF0P00Qd388Eew6aagvH85Ip,0*45
!AIVDM,1,1,,A,14eGrSPP00ncMJTO5C6aBwvP2D0?,0*7A
!AIVDM,1,1,,A,15MrVH0000KH<:V:NtBLoqFP2H9:,0*2F
```
text/plain
nmea
nmea-sample.txt
2023-02-06 11:24:44.113594+00:00
service-account-enrichment
Environmental research
Applied sciences
Earth sciences
https://datahub.egi.eu/api/v3/onezone/shares/data/00000000007E46B7736861726547756964236161643239616133666234633734356464393231356539663536613733616366636836643138233732356634616233366362323664306662666330633132346337373565666565636865653439236361386634383464346533366532646439643230336131383431616362656563636834393661/content
2023-01-08 19:37:15.986538+00:00
2023-02-19 13:22:45.129102+00:00
Data at the Acqua Alta oceanographic tower is a collection of physical and biogeochemical observation in the northern Adriatic Sea https://www.comune.venezia.it/it/content/3-piattaforma-ismar-cnr http://www.ismar.cnr.it/infrastrutture/piattaforma-acqua-alta
PTF dataset(2009-2020) Piattaforma acqua allta
2023-01-08 19:37:15.986538+00:00
https://doi.org/10.1016%2Fj.marpolbul.2021.112124
2023-01-08 19:24:00.526730+00:00
2023-02-19 13:22:53.090742+00:00
Reduction in the impact of human-induced factors is capable of enhancing the environmental health. In view of COVID-19 pandemic, lockdowns were imposed in India. Travel, fishing, tourism and religious activities were halted, while domestic and industrial activities were restricted. Comparison of the pre- and post-lockdown data shows that water parameters such as turbidity, nutrient concentration and microbial levels have come down from pre- to post-lockdown period, and parameters such as dissolved oxygen levels, phytoplankton and fish densities have improved. The concentration of macroplastics has also dropped from the range of 138 ± 4.12 and 616 ± 12.48 items/100 m2 to 63 ± 3.92 and 347 ± 8.06 items/100 m2. Fish density in the reef areas has increased from 406 no. 250 m−2 to 510 no. 250 m−2. The study allows an insight into the benefits of effective enforcement of various eco-protection regulations and proper management of the marine ecosystems to revive their health for biodiversity conservation and sustainable utilization.
Reef fish
covid-19
environmental health
plastic pollution
COVID-19 lockdown improved the health of coastal environment and enhanced the population of reef-fish
2023-01-08 19:24:00.526730+00:00
https://earthobservatory.nasa.gov/images/83394/parting-the-sea-to-save-venice
2023-01-08 19:58:47.516622+00:00
2023-02-19 13:22:55.402245+00:00
The natural-color Landsat images above show some of the MOSE engineering efforts that are visible above the water line near the Lido Inlet. The top image was acquired on June 20, 2000, by the Enhanced Thematic Mapper+ on Landsat 7. The second image, from the Operational Land Imager on Landsat 8, was collected on September 4, 2013. Turn on the image comparison tool to make the changes easier to see. (Note that Landsat 8 has a greater dynamic range than Landsat 7, so the Landsat 8 image is crisper the Landsat 7 image.)
Parting the Sea to Save Venice
2023-01-08 19:58:47.516622+00:00
giorgio.castellan@bo.ismar.cnr.it
Giorgio Castellan
0000-0001-6084-1504
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
federica.foglini@ismar.cnr.it
Federica Foglini
0000-0002-2736-0052
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
CNR-ISMAR
malek.belgacem@ve.ismar.cnr.it
Malek Belgacem
0000-0003-0745-4155
Małgorzata Wolniewicz
https://reliance.adamplatform.eu/?dataset=69623:EU_CAMS_SURFACE_NO2_G
2023-01-08 19:40:14.176174+00:00
2023-02-19 13:22:52.387115+00:00
CAMS NITROGEN DIOXIDE
2022-12-27T23:00:00Z
NO2
CAMS European air quality forecasts: NO2
2023-01-08 19:40:14.176174+00:00
2018-07-12T00:00:00Z
Float32
mailto:govoni@meeo.it
[1.354510459350422e-07]
[0.0]
https://reliance.adamplatform.eu/?dataset=69625:EU_CAMS_SURFACE_O3_G
2023-01-08 19:41:17.789149+00:00
2023-02-19 13:22:49.529744+00:00
CAMS OZONE
2022-12-27T23:00:00Z
O3
CAMS European air quality forecasts: O3
2023-01-08 19:41:17.789149+00:00
2018-07-12T00:00:00Z
Float32
mailto:govoni@meeo.it
[2.2007016298175586e-07]
[0.0]
https://reliance.adamplatform.eu/?dataset=69627:EU_CAMS_SURFACE_PM25_G
2023-01-08 19:42:25.690080+00:00
2023-02-19 13:22:51.053690+00:00
CAMS SURFACE PARTICULATE METTER D<2.5
2022-12-27T23:00:00Z
PM2.5
CAMS European air quality forecasts: PM25
2023-01-08 19:42:25.690080+00:00
2018-07-12T00:00:00Z
Float32
mailto:govoni@meeo.it
[709.8012084960938]
[0.0]
post@simula.no
00vn06n10
Simula Research Laboratory
https://w3id.org/ro-id/0869e396-3733-4aff-8fb2-94c8937b28aa
2023-01-08 19:15:20.212877+00:00
2023-02-19 13:22:55.556680+00:00
This is a case study of snapshot project http://snapshot.cnr.it/ to investigate the lockdown impact on the water quality at a selected site in the northern Adriatic Sea, precisely in Northern Adriatic Sea, the case of the Gulf of Venice using Machine Learning model.
Snapshot 2021 study case: Lockdown impacts on the Northern Adriatic Sea at selected site: AcquaAlta Platform Water quality
2023-01-08 19:15:20.212877+00:00
https://w3id.org/ro-id/53aa90bf-c593-4e6d-923f-d4711ac4b0e1
2023-01-08 19:14:03.311972+00:00
2023-02-19 13:22:50.947789+00:00
The COVID-19 pandemic has led to significant reductions in economic activity, especially during lockdowns. Several studies has shown that the concentration of nitrogen dioxyde and particulate matter levels have reduced during lockdown events. Reductions in transportation sector emissions are most likely largely responsible for the NO2 anomalies. In this study, we analyze the impact of lockdown events on the air quality using data from Copernicus Atmosphere Monitoring Service over Europe and at selected locations.
Impact of the Covid-19 Lockdown on Air quality over Europe
2023-01-08 19:14:03.311972+00:00
https://w3id.org/ro-id/53aa90bf-c593-4e6d-923f-d4711ac4b0e1/resources/2a2b6f01-be2e-414e-af08-d882aa995a71
2023-01-08 19:21:48.221333+00:00
2023-02-19 13:22:50.794426+00:00
In order to fight against the spread of COVID-19, the most hard-hit countries in the spring of 2020 implemented different lockdown strategies. To assess the impact of the COVID-19 pandemic lockdown on air quality worldwide, Air Quality Index (AQI) data was used to estimate the change in air quality in 20 major cities on six continents. Our results show significant declines of AQI in NO2, SO2, CO, PM2.5 and PM10 in most cities, mainly due to the reduction of transportation, industry and commercial activities during lockdown. This work shows the reduction of primary pollutants, especially NO2, is mainly due to lockdown policies. However, preexisting local environmental policy regulations also contributed to declining NO2, SO2 and PM2.5 emissions, especially in Asian countries. In addition, higher rainfall during the lockdown period could cause decline of PM2.5, especially in Johannesburg. By contrast, the changes of AQI in ground-level O3 were not significant in most of cities, as meteorological variability and ratio of VOC/NOx are key factors in ground-level O3 formation.
Impact of the COVID-19 Pandemic Lockdown on Air Quality Pollution in 20 Major cities around the World
2023-01-08 19:21:48.221333+00:00
https://w3id.org/ro-id/c2c64bf9-7625-4442-9ca9-dcd978b1d38b
2023-01-08 19:19:35.675216+00:00
2023-02-19 13:22:48.215320+00:00
Integration of data on Air and Water quality in the Venice Lagoon to assess the impact of the Covid-19 Lockdown
Impact of the Covid-19 Lockdown on Air and Water quality in the Venice Lagoon
2023-01-08 19:19:35.675216+00:00
The main interest is upon marine litter pollution and in particular ranging from marco to mirco and nano size. In encompasses data from citizen science monitoring and sampling activities in cooperation with research-educational institute and centers.
segreteria@plasticfreevenice.org
Marine Litter and plastics pollution
NICEST-2 - the second phase of the Nordic Collaboration on e-Infrastructures for Earth System Modeling focuses on strengthening the Nordic position within climate modeling by leveraging, reinforcing and complementing ongoing initiatives.
Nordic Collaboration on e-Infrastructures for Earth System Modeling Tools
https://w3id.org/ro-id/ed4e6aa2-9db8-452d-9301-ba1606361034
POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
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0d3b6136-ceba-417f-b1be-1629993a9831
POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
2c143630-6f7d-4317-af35-8977b7f3b8d5
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POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
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POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
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8113b8f8-412d-4b99-b7c0-113e1bebe467
POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
POLYGON ((12.094116155058147 45.146856282945706, 12.094116155058147 45.62908481204897, 12.816467229276897 45.62908481204897, 12.816467229276897 45.146856282945706, 12.094116155058147 45.146856282945706))
12.094116155058147 45.146856282945706, 12.094116155058147 45.62908481204897, 12.816467229276897 45.62908481204897, 12.816467229276897 45.146856282945706, 12.094116155058147 45.146856282945706
fb3a0ff7-80dd-466f-b2c5-4a4bcfee1770
POLYGON ((-25.000012 29.999997, 44.999988 29.999997, 44.999988 71.999997, -25.000012 71.999997, -25.000012 29.999997))
https://doi.org/10.24424/656f-rf51
False
2023-02-19 13:23:07.855375+00:00
293999
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In this study, we focusing on understanding changes in air and water quality during the Covid-19 lockdown in the Venice Lagoon. We are re-using existing Research Objects, and in particular Jupyter Notebooks that were created in previous studies.
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Jupyter Notebook
Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon - snapshot
Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne, Federica Foglini, Giorgio Castellan, Malek Belgacem, Jean Iaquinta, and Simone Mantovani. "Changes in air and water quality during the Covid-19 Lockdown in the Venice Lagoon." ROHub. Jan 08 ,2023. https://doi.org/10.24424/656f-rf51.
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The goal is to compare values of NO2 water quality before and during the covid-19 lockdown.
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NO2 water quality in the Venice lagoon between March-June 2019 and 2020.
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Bar plot showing NO2 averaged between March and June for 2019 and 2020. The goal is to compare values before and during the covid-19 lockdown.
NO2
NO2 Copernicus Air Quality forecasts for March-June 2019-2020
2023-01-08 20:22:56.960407+00:00
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2023-02-19 13:23:04.921504+00:00
Dataset shows monthly values and error bars.
image/png
Water quality in the Venice Lagoon between 2010 and 2020.
2023-01-08 19:35:05.569853+00:00
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Keywords: COVID ; AQI; lockdown policy; major cities; NO ; PM . ; ozone
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NO2 CAMS over Europe March-June 2019, 2020 and 2021
2023-01-08 19:38:36.937507+00:00
mantovani@meeo.it
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Raul Palma
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University of Freiburg, Freiburg (Germany)
bjoern.gruening@gmail.com
Björn Grüning
0000-0002-3079-6586
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University of Oslo
04jcwf484
Nordic e-Infrastructure Collaboration
Docker for Galaxy Pangeo notebook from official Pangeo image.
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This Jupyter Docker container is used by the Galaxy Project. It is based on Pangeo notebook docker image (https://github.com/pangeo-data/pangeo-docker-images) and contained a few additional packages required for Galaxy (to exchange data, etc.).
application/ld+json
https://w3id.org/ro-id/aae72e1c-6d73-4c25-a565-f855cfb434b6
climate
docker
jupyterlab
pangeo
Docker for Galaxy Pangeo notebook from official Pangeo image - snapshot
Docker for Galaxy Pangeo notebook from official Pangeo image
MANUAL
https://w3id.org/ro-id/aae72e1c-6d73-4c25-a565-f855cfb434b6/86cab475-53ae-4125-83e1-9dd3a547930b
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https://w3id.org/ro-id/7433fb0b-eb3f-4076-81f3-b0a44708a4ac
https://w3id.org/ro-id/7c1460a9-da75-4d3f-a839-63a560aaad51
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Anne Foilloux, and Björn Grüning. "Docker for Galaxy Pangeo notebook from official Pangeo image." ROHub. Mar 26 ,2022. https://doi.org/10.24424/f0q9-8e35.
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output
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biblio
tool
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2022-03-30 16:49:24.424570+00:00
2023-02-19 13:50:03.407487+00:00
Copernicus Atmosphere Monitoring Service PM2.5, 2 day forecasts, 24th December 2021 at 12:00 UTC
image/png
CAMS PM2.5, 2 day forecasts, 24th December 2021 at 12:00 UTC
2022-03-30 16:49:24.424570+00:00
https://training.galaxyproject.org/training-material/topics/climate/tutorials/pangeo-notebook/tutorial.html
2022-03-30 15:59:56.246391+00:00
2023-02-19 13:49:56.427998+00:00
Training material (hands-on) where Pangeo Notebook is used to learn Xarray. This training is part of the Galaxy Training Network (GTN).
In this tutorial, we will learn about Xarray, one of the most used Python library from the Pangeo ecosystem.
We will be using data from Copernicus Atmosphere Monitoring Service and more precisely PM2.5 (Particle Matter < 2.5 μm) 4 days forecast from December, 22 2021. Parallel data analysis with Pangeo is not covered in this tutorial.
text/html
Pangeo Notebook in Galaxy - Introduction to Xarray (GTN)
2022-03-30 15:59:56.246391+00:00
https://quay.io/repository/nordicesmhub/docker-pangeo-notebook
2022-03-29 11:58:28.213223+00:00
2023-02-19 13:49:55.588074+00:00
These docker images (different tags) correspond to the docker images built for Galaxy Pangeo JupyterLab.
The docker images can be used within Galaxy and as standalone docker images.
You can use the same images we use in Galaxy on your local computer or any other platform:
1. Pull an existing image locally
docker pull quay.io/nordicesmhub/docker-pangeo-notebook
2. Run a pre-build image from docker registry
3. To start your JupyterLab:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook
and you will top open a new terminal and start your favorite web browser.
your running Jupyter Notebook instance on http://localhost:7777/ipython/.
Remark: for reproducibility purpose, we suggest you use a specific tag e.g.
docker pull quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
Then use the same tag when starting your JupyterLab application:
docker run -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
Docker images for Galaxy Pangeo JupyterLab (Quay Container Registry)
2022-03-29 11:58:28.213223+00:00
https://doi.org/10.5281/zenodo.5805953
2022-03-30 16:52:19.796786+00:00
2023-02-19 13:49:55.345103+00:00
Dataset used in the Galaxy Pangeo tutorials on Xarray.
Data is in netCDF format and is from Copernicus Air Monitoring Service and more precisely PM2.5 (Particle Matter < 2.5 μm) 4 days forecast from December, 22 2021. This dataset is very small and there is no need to parallelize our data analysis. Parallel data analysis with Pangeo is not covered in this tutorial and will make use of another dataset.
netCDF input file PM2.5 4 days forecast from December, 22 2020
2022-03-30 16:52:19.796786+00:00
10.5281/zenodo.6394185
https://doi.org/10.5281/zenodo.6399102
2022-03-29 17:55:05.034625+00:00
2023-02-19 13:49:56.124648+00:00
This is a tarball for the Docker Galaxy pangeo-JupyterLab image - Version 1c0f66b.
To use it:
download the image file docker-pangeo-notebook-1c0f66b.tar
load it with docker with the command: docker load --input docker-pangeo-notebook-1c0f66b.tar
launch the Docker container binding of your data folder (on the local machine) with the /import folder i(inside the container) with the command: docker run -v my_data_folder:/import -p 7777:8888 quay.io/nordicesmhub/docker-pangeo-notebook:1c0f66b
start your favorite web browser and go to: http://localhost:7777/ipython/
See https://github.com/NordicESMhub/docker-pangeo-notebook for more details
Docker Galaxy pangeo-JupyterLab image Version 1c0f66b
2022-03-29 17:55:05.034625+00:00
1729
https://api.rohub.org/api/resources/56c7c29c-badc-45ad-bb41-75ba492064e2/download/
2022-03-29 12:08:38.781608+00:00
2023-02-19 13:49:59.656812+00:00
Default Jupyter Notebook used when starting Galaxy Climate JupyterLab if no other Jupyter Notebook is passed by the user.
Default Jupyter Notebook for Galaxy Climate JupyterLab
2022-03-29 12:08:38.781608+00:00
29899819
https://api.rohub.org/api/resources/9663df26-3adb-40ed-b68e-391c2023ec0b/download/
2022-03-30 16:44:58.679622+00:00
2023-02-19 13:50:02.589260+00:00
This is a gif animated image showing how to start the Galaxy Pangeo JupyterLab in Galaxy Europe. In this video, we pass an input file (this file will be imported in the Jupyter Notebook /import folder).
image/gif
How to start Galaxy Pangeo JupyterLab (gif animated)
2022-03-30 16:44:58.679622+00:00
5306
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2022-03-30 16:14:11.257847+00:00
2023-02-19 13:49:59.932314+00:00
This is the Galaxy Pangeo JupyterLab tool wrapper used by Galaxy to start the Galaxy Pangeo JupyterLab on a Galaxy instance.
application/xml
Galaxy Pangeo JupyterLab Tool wrapper (xml)
2022-03-30 16:14:11.257847+00:00
https://github.com/NordicESMhub/docker-pangeo-notebook
2022-03-29 12:01:31.834492+00:00
2023-02-19 13:49:54.422945+00:00
This github repository contains all the sources required for building the docker containers that are made available in Quay Container Registry.
Source code for building the docker container (github repository)
2022-03-29 12:01:31.834492+00:00
https://jupyterlab.readthedocs.io/en/stable/
2022-03-28 14:14:45.648769+00:00
2023-02-19 13:49:56.297137+00:00
Link to the online JupyterLab documentation.
JupyterLab Documentation
2022-03-28 14:14:45.648769+00:00
notebook from official Pangeo image
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Detecting macro floating objects on coastal water bodies using sentinel-2 data
2022-01-28 16:07:40.875698+00:00
https://doi.org/10.5194/isprs-annals-V-3-2021-285-2021
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2022-01-28 16:07:43.339740+00:00
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2022-01-28 16:07:34.662177+00:00
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Detecting macro floating objects on coastal water bodies using sentinel-2 data
2022-01-28 16:07:40.875698+00:00
https://doi.org/10.5194/isprs-annals-V-3-2021-285-2021
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Towards detecting floating objects on a global scale with learned spatial features using sentinel 2
2022-01-28 16:07:43.339740+00:00
https://doi.org/10.5281/zenodo.5827376
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Related publication(s) of the modelling presented in the Jupyter notebook
Cross-site learning in deep learning rgb tree crown detection
2022-02-20 20:24:10.407957+00:00
https://doi.org/10.1111/2041-210X.13472
2022-02-20 20:24:04.687051+00:00
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Related publication(s) of the modelling presented in the Jupyter notebook
Deepforest: a python package for rgb deep learning tree crown delineation
2022-02-20 20:24:04.687051+00:00
https://doi.org/10.3390/rs11111309
2022-02-20 20:24:06.974255+00:00
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Individual tree-crown detection in rgb imagery using semi-supervised deep learning neural networks
2022-02-20 20:24:06.974255+00:00
https://doi.org/10.5281/zenodo.3459802
2022-02-20 20:23:52.295018+00:00
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
2023-03-20 18:04:53.431880+00:00
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2022-04-03 22:38:17.386248+00:00
2023-03-20 18:04:55.846637+00:00
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Related publication of the exploration presented in the Jupyter notebook
The NMC/NCAR 40-year reanalysis project
2022-07-24 18:44:23.809948+00:00
Environmental research
Climatology
https://doi.org/10.1175/BAMS-D-20-0117.1
2022-07-24 18:44:26.453549+00:00
2023-03-20 18:21:11.415216+00:00
Related publication of the exploration presented in the Jupyter notebook
Quantifying Causal Pathways of Teleconnections
2022-07-24 18:44:26.453549+00:00
https://doi.org/10.5281/zenodo.6824189
2022-07-24 18:44:21.623972+00:00
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2022-05-20 22:39:28.244049+00:00
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Related publication of the exploration presented in the Jupyter notebook
Soil water content in southern england derived from a cosmic-ray soil moisture observing system – cosmos-uk
2022-05-20 22:39:28.244049+00:00
https://doi.org/10.5194/hess-16-4079-2012
2022-05-20 22:39:29.949068+00:00
2023-03-20 18:24:10.768453+00:00
Related publication of the exploration presented in the Jupyter notebook
Cosmos: the cosmic-ray soil moisture observing system
2022-05-20 22:39:29.949068+00:00
https://doi.org/10.5281/zenodo.6566942
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2023-03-20 18:24:10.094217+00:00
Related publication of the exploration presented in the Jupyter notebook
Daily and sub-daily hydrometeorological and soil data (2013-2019) [cosmos-uk]
2022-05-20 22:39:26.375450+00:00
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
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https://doi.org/10.5281/zenodo.6410246
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Contains outputs, (table and figures), generated in the Jupyter notebook of Sea ice forecasting using IceNet
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The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book.
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Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
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Computational notebooks community focused on Environmental Data Science
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Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
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2022-04-03 22:38:18.897063+00:00
2023-05-03 14:27:02.088725+00:00
Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
2023-05-03 14:27:02.312221+00:00
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2022-04-03 22:38:16.031702+00:00
https://doi.org/10.5281/zenodo.6410246
2022-04-03 22:38:17.386248+00:00
2023-05-03 14:27:03.464603+00:00
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2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
2022-04-03 22:38:14.669821+00:00
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2022-03-27 19:36:02.837817+00:00
https://doi.org/10.5281/zenodo.6387953
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2023-05-03 14:48:33.280061+00:00
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https://github.com/shmh40/detectreeRGB
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Related publication of the modelling presented in the Jupyter notebook
detectreeRGB source code
2022-03-27 19:36:09.352889+00:00
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Alejandro Coca-Castro
University of Cambridge
Sebastian H. M. Hickman
service-account-enrichment
Applied sciences
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
service-account-enrichment
7048
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This RO is created as part of the mini workshop on RoHub during CW23.
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The Alan Turing Institute
acoca@turing.ac.uk
Alejandro Coca-Castro
admin NordicESMHub
Environmental research
service-account-enrichment
6542
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Demo app for state tagging approach for QA/QC of environmental data
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State tagging demo application
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https://doi.org/10.5285/1de712d3-081e-4b44-b880-b6a1ebf9fcd8
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Tso, Michael. "State tagging demo application." ROHub. May 03 ,2023. https://w3id.org/ro-id/ab3f22c0-7006-4f8b-9a0c-f604654241d8.
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2023-05-12 12:59:40.255351+00:00
2023-05-12 12:59:41.215885+00:00
This R application is an implementation of state tagging approach for improved quality assurance of environmental data. The application returns state-dependent prediction intervals on input data. The states are determined based on clustering of auxiliary inputs (such as meteorological data) made on the same day. The method provides contextual information to assess the quality of observational data and is applicable to any point-based, daily time series observational data.
To use this application, the user will need to input two separate csv files: one for state variables and the other for observations.
This work was supported by the Natural Environment Research Council award number NE/R016429/1 as part of the UK-SCAPE programme delivering National Capability.
State tagging application for environmental data quality assurance
2023-05-12 12:59:40.255351+00:00
Michael Tso
Environmental research
Climatology
https://doi.org/10.1038/s41467-021-25257-4
2022-04-03 22:38:18.897063+00:00
2023-05-10 19:04:41.720962+00:00
Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
2023-05-10 19:04:41.853190+00:00
Contains input Dataset for IceNet's demo notebook used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Dataset for IceNet's demo notebook
2022-04-03 22:38:16.031702+00:00
https://doi.org/10.5281/zenodo.6410246
2022-04-03 22:38:17.386248+00:00
2023-05-10 19:04:43.558817+00:00
Contains outputs, (table and figures), generated in the Jupyter notebook of Sea ice forecasting using IceNet
Outputs
2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
2022-04-03 22:38:14.669821+00:00
2023-05-10 19:04:40.296258+00:00
Contains input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning' used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning'
2022-04-03 22:38:14.669821+00:00
https://edsbook.org/notebooks/gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/notebook.html
2022-04-03 22:38:31.388108+00:00
2023-05-10 19:04:43.816448+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
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2022-04-03 22:38:31.388108+00:00
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Jupyter Notebook hosted by the Environmental Data Science Book
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The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book.
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Environmental Science
Jupyter Notebook
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book - fork
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book forked JupyterCon 2023
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Alejandro Coca-Castro, Tom Andersson, and Nick Barlow. "Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book forked JupyterCon 2023." ROHub. Apr 03 ,2022. https://w3id.org/ro-id/2b9f4a1a-d72d-4e02-bd58-8ee96e7a224d.
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2023-05-10 19:04:43.452534+00:00
image/png
Image showing interactive plot of IceNet seasonal forecasts of Artic sea ice according to four lead times and months in 2020
2022-04-03 22:38:08.092594+00:00
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environmental.ds.book@gmail.com
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Environmental Data Science Book Community
The Alan Turing Institute
Alejandro Coca-Castro
The Alan Turing Institute
Nick Barlow
he British Antarctic Survey
Tom Andersson
service-account-enrichment
Environmental research
Climatology
https://doi.org/10.1038/s41467-021-25257-4
2022-04-03 22:38:18.897063+00:00
2023-05-12 13:23:13.755021+00:00
Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2022-04-03 22:38:18.897063+00:00
https://doi.org/10.5281/zenodo.5516869
2022-04-03 22:38:16.031702+00:00
2023-05-12 13:23:14.459856+00:00
Contains input Dataset for IceNet's demo notebook used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Dataset for IceNet's demo notebook
2022-04-03 22:38:16.031702+00:00
https://doi.org/10.5281/zenodo.6410246
2022-04-03 22:38:17.386248+00:00
2023-05-12 13:23:18.568513+00:00
Contains outputs, (table and figures), generated in the Jupyter notebook of Sea ice forecasting using IceNet
Outputs
2022-04-03 22:38:17.386248+00:00
https://doi.org/10.5285/71820e7d-c628-4e32-969f-464b7efb187c
2022-04-03 22:38:14.669821+00:00
2023-05-12 13:23:09.571914+00:00
Contains input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning' used in the Jupyter notebook of Sea ice forecasting using IceNet
Input Forecasts, neural networks, and results from the paper: 'Seasonal Arctic sea ice forecasting with probabilistic deep learning'
2022-04-03 22:38:14.669821+00:00
https://edsbook.org/notebooks/gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/notebook.html
2022-04-03 22:38:31.388108+00:00
2023-05-12 13:23:19.653895+00:00
Rendered version of the Jupyter Notebook hosted by the Environmental Data Science Book
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Online rendered version of the Jupyter notebook
2022-04-03 22:38:31.388108+00:00
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Lock conda file for linux-64 OS of the Jupyter notebook hosted by the Environmental Data Science Book
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Jupyter Notebook hosted by the Environmental Data Science Book
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The research object refers to the Sea ice forecasting using IceNet notebook published in the Environmental Data Science book.
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Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book - fork
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book JupyterCon2023
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Image showing interactive plot of IceNet seasonal forecasts of Artic sea ice according to four lead times and months in 2020
2022-04-03 22:38:08.092594+00:00
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book JupyterCon2023.
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2023-06-06 10:11:53.841611+00:00
This case study targets the Mediterranean cold water coral (CWC) habitats that develop under thermal conditions very close to 14°C. Maps of the current cold water coral distribution in the Mediterranean Sea will be correlated to physical parameters (i.e. Temperature) from field data and regional model Med-CORDEX.
Considering that intermediate and deep water in the Mediterranean sea temperature is around 14°C, this suggests that most of the cold water coral species in the region thrive very close to their physiological threshold.
Future scenarios are provided based on regional models (e.g. Med-CORDEX). the objective is to investigate future scenarios and predictions in case of a an increased of temperature and its consequents on CWC habitat loss.
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corals habitat
mediterranean sea
warming climate
Research Object
Spatial distribution of Cold Water Corals (CWC) in the Mediterranean Sea - Workflow
MANUAL
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Belgacem, Malek, Jacopo Chiggiato, Paolo Montagna, Giorgio Castellan, and Valentina Grande. "Spatial distribution of Cold Water Corals (CWC) in the Mediterranean Sea - Workflow." ROHub. Jun 06 ,2023. https://w3id.org/ro-id/cf84e531-56d3-43ee-8362-c340d0addf30.
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biblio
tool
output
input
https://datahub.egi.eu/share/09efeb1ed6cd59927b7b88547b147688chdc0f
2023-06-22 09:21:53.906738+00:00
2023-06-22 09:31:46.807501+00:00
Seawater temperature from MEDCORDEX output model: CNRM-CM5, variable: monthly seawater temperature (thetao) from (1995-2005)
Historical data (1995-2005)
2023-06-22 09:21:53.906738+00:00
57
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environment
environment
2023-06-26 15:50:43.131066+00:00
https://datahub.egi.eu/share/2c81816c45557e239b9b23236d77f79cch8af6
2023-06-22 09:47:57.798427+00:00
2023-06-26 13:25:52.467050+00:00
map of Cold water corals spatial distribution with 14°C isotherm depth predictions from RCP 8.5 (2070-2100) scenarios
map of Cold water corals spatial distribution with 14°C isotherm depth
2023-06-22 09:47:57.798427+00:00
https://datahub.egi.eu/share/5f290ab67abd56a90aa4eddf77797418ch1b5b
2023-06-22 09:25:44.415826+00:00
2023-06-22 09:25:45.653688+00:00
Seawater temperature from MEDCORDEX output model: CNRM-CM5, variable: monthly seawater temperature (thetao)
RCP 8.5 (2070-2100)scenarios
RCP85 data (2070-2100) scenarios
2023-06-22 09:25:44.415826+00:00
https://datahub.egi.eu/share/85339a654ee3057f9eb3ec2582bd353fchfb1b
2023-06-22 09:36:22.534101+00:00
2023-06-22 09:36:23.803138+00:00
the coastline of the Mediterranean sea
med_coastline
2023-06-22 09:36:22.534101+00:00
https://datahub.egi.eu/share/2dfa3987f9acf28b04b0891077a138fechd216
2023-06-22 14:15:01.298922+00:00
2023-06-22 14:15:02.686446+00:00
CWC spatial distribution color-coded with depth against the varibility of the Isotherm 14°C depth
upper panel: historical data (1995-2005) and lower panel: RCP 8.5 scenario (2070-2100)
CWC spatial distribution and 14°C isotherm depth
2023-06-22 14:15:01.298922+00:00
4331673
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video/mp4
cwc_matlab_notebook.mp4
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https://www.medcordex.eu/
2023-06-08 10:53:23.406797+00:00
2023-06-08 10:53:24.242172+00:00
Med-CORDEX initiative has been proposed by the Mediterranean climate research community as a follow-up of previous and existing initiatives. Med-CORDEX takes advantage of new very high-resolution Regional Climate Models (RCM, up to 10 km) and of new fully coupled Regional Climate System Models (RCSMs), coupling the various components of the regional climate
Med-CORDEX
2023-06-08 10:53:23.406797+00:00
1275252
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2023-06-22 13:58:56.292595+00:00
image/png
out_cwc.png
2023-06-22 13:58:55.593503+00:00
66860
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Jupyter notebook to plot Cold Water Corals and 14°C isotherm depth scenarios
Plot Cold Water Corals and 14°C isotherm depth scenarios
2023-06-26 15:49:08.939934+00:00
https://w3id.org/ro-id/cf84e531-56d3-43ee-8362-c340d0addf30/resources/137b72a2-daac-4f87-8df9-df6204ff1ec4
https://datahub.egi.eu/share/52fd6ffa2fa3450e75344c8bd0a499c9ch3590
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2023-06-22 09:41:28.443739+00:00
Cold water coral location: longitude, latitude and depths
cwc_location: Cold water coral locations
2023-06-22 09:39:47.879411+00:00
https://datahub.egi.eu/share/5dde7440a52105c483b60a833f2a5d47ch8814
2023-06-22 09:12:52.392599+00:00
2023-06-22 09:12:53.645175+00:00
This python notebook will download automatically the files you need from the model https://www.medcordex.eu/ and create directories to save them.
load Netcdf files from Medcordex
2023-06-22 09:12:52.392599+00:00
https://w3id.org/ro-id/dd87ac68-c7b8-4641-a610-5587978d6ff5
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Bibliography
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1140472
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image/png
Cold Water Corals spatial distribution
2023-06-11 12:50:25.202932+00:00
https://datahub.egi.eu/share/d1bc921874d3126cb00ab64621618072ched2a
2023-06-22 09:19:58.012252+00:00
2023-06-22 09:19:59.456564+00:00
code#1: reads netcdf data of seawater temperature from MEDCORDEX output model: CNRM-CM5 variable: monthly seawater temperature (thetao)
code#2: This script reads netcdf data of seawater temperature from MEDCORDEX output model: CNRM-CM5 variable: monthly seawater temperature (thetao)
code#3: This script reads in 14°C isotherm depth from historical (1995-2005) and RCP 8.5 (2070-2100)scenarios and plot data
matlab
Matlab code to read and plot
2023-06-22 09:19:58.012252+00:00
temperature
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Med-CORDEX
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Mediterranean Sea
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distribution of Cold Water Corals
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This case study targets the Mediterranean cold water coral (CWC) habitats that develop under thermal conditions very close to 14°C.
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direttore@ismar.cnr.it
CNR-ISMAR
CNR-ISMAR
jacopo.chiggiato@ismar.cnr.it
Jacopo Chiggiato
paolo.montagna@cnr.it
Paolo Montagna
http://doi.org/10.1017/eds.2022.10
2023-08-29 10:59:46.964607+00:00
2023-08-29 10:59:47.790718+00:00
Related publication of the modelling presented in the Jupyter notebook
A sensitivity analysis of a regression model of ocean temperature
2023-08-29 10:59:46.964607+00:00
Environmental research
https://doi.org/10.5281/zenodo.7919172
2023-08-29 10:59:38.640927+00:00
2023-08-29 10:59:39.749245+00:00
Contains input MITgcm Dataset for paper: Sensitivity analysis of a data-driven model of ocean temperature (v1.1) used in the Jupyter notebook of Learning the Underlying Physics of a Simulation Model of the Ocean's Temperature (CIRC23)
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2023-08-29 10:59:38.640927+00:00
https://doi.org/10.5281/zenodo.7954232
2023-08-29 10:59:41.574300+00:00
2023-08-29 10:59:42.414185+00:00
Contains input Reproducible Challenge - Team 3 - Sensitivity analysis- Models used in the Jupyter notebook of Learning the Underlying Physics of a Simulation Model of the Ocean's Temperature (CIRC23)
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2023-08-29 10:59:41.574300+00:00
https://doi.org/10.5281/zenodo.8271978
2023-08-29 10:59:44.271823+00:00
2023-08-29 10:59:45.150207+00:00
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2023-08-29 10:59:44.271823+00:00
https://edsbook.org/notebooks/gallery/3286b92f-4fae-4cc6-a29e-e408bc844542/notebook.html
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2023-08-30 13:22:30.233890+00:00
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Related publication of the modelling presented in the Jupyter notebook
Detection and attribution of climate change: A deep learning and variational approach
2023-08-30 13:22:30.233890+00:00
Environmental research
https://doi.org/10.5281/zenodo.8279574
2023-08-30 13:22:27.672644+00:00
2023-08-30 13:22:28.460841+00:00
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2023-08-30 13:22:25.897047+00:00
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Related publication of the exploration presented in the Jupyter notebook
The NMC/NCAR 40-year reanalysis project
2022-07-24 18:44:23.809948+00:00
Environmental research
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2022-07-24 18:44:26.453549+00:00
2023-09-11 14:17:08.272611+00:00
Related publication of the exploration presented in the Jupyter notebook
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2022-07-24 18:44:26.453549+00:00
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2022-07-24 18:44:21.623972+00:00
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Contains outputs, (figures), generated in the Jupyter notebook of Concatenating a gridded rainfall reanalysis dataset into a time series
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2022-07-24 18:44:21.623972+00:00
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Related publication of the modelling presented in the Jupyter notebook
Deep prior in variational assimilation to estimate an ocean circulation without explicit regularization
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https://doi.org/10.5281/zenodo.8338556
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Contains outputs, (figures, models and results), generated in the Jupyter notebook of Variational data assimilation with deep prior (CIRC23)
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Link to the official GFTS DESP use case.
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Harnessing the Pangeo ecosystem for delivering the cloud-based Global Fish Tracking System
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https://doi.org/10.5194/egusphere-egu24-15500
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Presentation given at EGU 2024.
Advancing Marine Ecosystem Conservation with the Global Fish Tracking System on the Destination Earth Service Platform
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https://doi.org/10.5281/zenodo.10213946
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Presentation given at the kick-off meting of the GFTS project.
Global Fish Tracking System Kickoff
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https://doi.org/10.5281/zenodo.10372387
2023-12-13 20:50:53.907411+00:00
2023-12-13 20:51:41.151934+00:00
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Global Fish Tracking System - DESP Use Case
2023-12-13 20:50:53.907411+00:00
https://doi.org/10.5281/zenodo.10809819
2024-03-12 15:34:59.645366+00:00
2024-03-12 15:36:06.334092+00:00
Poster presented at the 8th InternationalBio-logging Science Symposium by Tina Odaka, March 2024.
BSL8
Leveraging Pangeo to Geolocate Fish Using Biologging Data: The Pangeo-Fish Initiative
2024-03-12 15:34:59.645366+00:00
https://doi.org/10.5281/zenodo.11185948
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Project Management Plan for the Global fish Tracking System Use Case on the DestinE Platform.
Deliverable 5.1 - Project Management Plan for GFTS Use Case Application
2024-05-13 14:46:37.545543+00:00
https://doi.org/10.5281/zenodo.11186084
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Deliverable 5.2 - Use Case Descriptor for the Global fish Tracking System Use Case on the DestinE Platform.
Deliverable 5.2 - Use Case Descriptor for GFTS Use Case Application
2024-05-13 14:52:05.526290+00:00
https://doi.org/10.5281/zenodo.11186123
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The Gobal Fish track system Use case Application on the DestinE Platform
Deliverable 5.3 - GFTS Use case Application
2024-05-13 14:53:36.574750+00:00
https://doi.org/10.5281/zenodo.11186179
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Deliverable 5.5 corresponding to the Global Fish tracking System Use Case Promotion Package
Deliverable 5.5 - GFTS Use Case Promotion Package
2024-05-13 14:54:51.494324+00:00
https://doi.org/10.5281/zenodo.11186191
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This report corresponds to the Software Reuse File for the GFTS DestinE Platform Use Case. New version will be uploaded regularly.
Software Reuse File for the GFTS DestinE Platform Use Case
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https://doi.org/10.5281/zenodo.11186227
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The Software Release Plan for the Global Fish Tracking System DestinE Use Case.
GFTS Software Release Plan
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https://doi.org/10.5281/zenodo.11186257
2024-05-13 14:58:42.259068+00:00
2024-05-13 15:00:17.188379+00:00
The Software Requirement Specifications for the Global fish Tracking System DestinE Use Case.
GFTS Software Requirement Specifications
2024-05-13 14:58:42.259068+00:00
https://doi.org/10.5281/zenodo.11186288
2024-05-13 15:02:41.488702+00:00
2024-05-13 15:03:41.717937+00:00
The Software Verification and Validation Plan for the Global fish Tracking System DestinE Use Case.
GFTS Software Verification and Validation Plan
2024-05-13 15:02:41.488702+00:00
https://doi.org/10.5281/zenodo.11186318
2024-05-13 15:04:39.257557+00:00
2024-05-13 15:05:10.112227+00:00
The Software Verification and Validation Report from the Global Fish Tracking System DestinE Use Case.
GFTS Software Verification and Validation Report
2024-05-13 15:04:39.257557+00:00
https://doi.org/10.5281/zenodo.13908850
2024-10-12 12:50:43.880902+00:00
2024-10-12 12:51:07.419248+00:00
Poster presented at the 2nd DestinE User eXchange Conference.
Global Fish Tracking Service (GFTS) 2nd DestinE User eXchange Conference Poster
2024-10-12 12:50:43.880902+00:00
https://gfts.minrk.net/
2024-04-03 08:56:53.930425+00:00
2024-04-03 08:56:55.776408+00:00
Link to the Pangeo JupyterHub we are using for developing Pangeo Fish. Only users from GFTS can register and authenticate to this JupyterHub
jupyterhub
Pangeo JupyterHub (OVH)
2024-04-03 08:56:53.930425+00:00
https://jupyter.central.data.destination-earth.eu/
2024-04-03 08:59:43.770409+00:00
2024-04-03 08:59:45.582481+00:00
JupyterHub on Destination Earth Data Lake
jupyterhub
JupyterHub on Destination Earth Data Lake
2024-04-03 08:59:43.770409+00:00
IFREMER
Emmanuelle Autret
0000-0002-0979-9192
IFREMER
Mathieu Woillez
0000-0002-1032-2105
Ifremer
tina.odaka@ifremer.fr
Tina Odaka
0000-0002-1500-0156
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
Development Seed
danielwiesmann@developmentseed.org
Daniel Wiesmann
0000-0002-3190-4278
Development Seed
olaf@developmentseed.org
Olaf Veerman
0000-0002-5408-9923
Development Seed
Daniel da Silva
0009-0002-4476-7927
Development Seed
Ricardo Mestre
0009-0008-7946-8568
post@simula.no
00vn06n10
Simula Research Laboratory
dpo@ifremer.fr
044jxhp58
IFREMER
https://w3id.org/np/RAsFv4Wt5R_8zdUBoBBHAfqyDYNbfnrMEoJ4t6iDfBUUY
2024-03-13 08:29:17.573606+00:00
2024-03-13 08:39:10.170376+00:00
FAIR Implementation Profile (FIP) for the GFTS project.
FIP
FIP for GFTS project
2024-03-13 08:29:17.573606+00:00
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2023-11-28 14:53:38.668993+00:00
2025-10-16 13:11:59.036263+00:00
2023-11-28 14:53:38.668993+00:00
**Use Case topic**: The goal of this use case is the development and implementation of the Global Fish Tracking System (GFTS) to enhance understanding and management of wild fish stocks
**Scale of the Use Case (Global/Regional/National)**: Local to Global (various locations worldwide)
**Policy addressed**: Fisheries Management Policy
**Data Sources used**: Climate Change Adaptation (Climate DT: Routine and On-Demand for some higher resolution tracking), Sea Temperature observation (Satelite, in-situ) Copernicus Marine services (Sea temperature and associated value), Bathymetry (Gebco), biologging fish data
**Github Repository**: [https://github.com/destination-earth/DestinE_ESA_GFTS.git](https://github.com/destination-earth/DestinE_ESA_GFTS.git)
application/ld+json
https://w3id.org/ro-id/2edcfa66-0f59-42f4-aa29-1c5681466424
fish
fish-tracking
Global Fish Tracking System (GFTS): a Destination Earth Service Platform Use Case
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Fouilloux, Anne, Benjamin Ragan-Kelley, Mathieu Woillez, Tina Odaka, Daniel Wiesmann, Emmanuelle Autret, Olaf Veerman, Daniel da Silva, and Ricardo Mestre. "Global Fish Tracking System (GFTS): a Destination Earth Service Platform Use Case." ROHub. Nov 28 ,2023. https://w3id.org/ro-id/2edcfa66-0f59-42f4-aa29-1c5681466424.
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input
output
reports_and_deliverables
tool
This folder contains presentations or other kind of materials (such as training material) developed and presented during events.
events
This folder contains project documents such as DMP, link to website and github repository, etc.
documents
2081827
https://api.rohub.org/api/resources/9b1c9bc2-f28a-449d-be32-0b36fe29ab1c/download/
2024-03-13 07:40:26.715784+00:00
2024-03-13 07:40:30.176654+00:00
This pitcure shows Tina Odaka presenting the Global Fish Tracking System (GFTS) DestinE DESP Use Case at the 8th International Bio-logging Science Symposium, Tokyo, Japan (4-8 March 2024).
image/png
Photo of Tina Odaka at BSL8
2024-03-13 07:40:26.715784+00:00
313600
https://api.rohub.org/api/resources/a09a17f7-75cb-4d19-8166-aea9308ce506/download/
2024-10-12 12:57:01.255550+00:00
2024-10-12 12:57:26.416948+00:00
Slide extracted from the presentation to the 3rd Destination Earth User eXchange (2024).
image/png
Overview of the GFTS
2024-10-12 12:57:01.255550+00:00
258569
https://api.rohub.org/api/resources/b247b4e5-f208-407e-a15b-d9a4a09a90d5/download/
2023-11-28 14:55:18.760223+00:00
2024-10-12 12:57:59.259707+00:00
image/png
GFTS.png
2023-11-28 14:55:18.760223+00:00
False
2024-08-12 19:50:28.397218+00:00
A community platform for Big Data geoscience
pangeo-europe@gmail.com
Pangeo
https://pangeo.io/
oceanography
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logging
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sea temperature observation
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use case topic
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geosciences
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Global Fish Tracking System (GFTS): a Destination Earth Service Platform Use Case.
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temperature
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fish
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sea
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implementation of the Global Fish Tracking System
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earth sciences
100.0
0.8193894028663635
value
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Hardware
Economy, business and finance/Economic sector/Computing and information technology/Hardware
http
11.1531190926276
5.9
fish data
18.75
11.1
earth resources and remote sensing
100.0
0.43638113141059875
Weather
Weather
tracking
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meteorology
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destination Earth service platform use case
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sea
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temperature
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use case
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Climate change
Environment/Climate change
Global Fish Tracking System
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**Use Case topic**: The goal of this use case is the development and implementation of the Global Fish Tracking System (GFTS) to enhance understanding and management of wild fish stocks
**Scale of the Use Case (Global/Regional/National)**: Local to Global (various locations worldwide)
**Policy addressed**: Fisheries Management Policy
**Data Sources used**: Climate Change Adaptation (Climate DT: Routine and On-Demand for some higher resolution tracking), Sea Temperature observation (Satelite, in-situ) Copernicus Marine services (Sea temperature and associated value), Bathymetry (Gebco), biologging fish data
**Github Repository**: [https://github.com/destination-earth/DestinE_ESA_GFTS.git](https://github.com/destination-earth/DestinE_ESA_GFTS.git)
66.36636636636636
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data source
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data
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http
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fish
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value
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information technology
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Simula, Department of Numerical Analysis and Scientific Computing (Norway)
benjaminrk@simula.no
Benjamin Ragan-Kelley
info@developmentseed.org
Development Seed
Applied sciences
https://doi.org/10.1093/nar/gkac247
2024-04-09 18:59:25.010332+00:00
2024-04-09 19:00:06.101129+00:00
Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute to the project, with support from multiple national infrastructure providers that enable freely accessible analysis and training services. The Galaxy Training Network supports free, self-directed, virtual training with >230 integrated tutorials. Project engagement metrics have continued to grow over the last 2 years, including source code contributions, publications, software packages wrapped as tools, registered users and their daily analysis jobs, and new independent specialized servers. Key Galaxy technical developments include an improved user interface for launching large-scale analyses with many files, interactive tools for exploratory data analysis, and a complete suite of machine learning tools. Important scientific developments enabled by Galaxy include Vertebrate Genome Project (VGP) assembly workflows and global SARS-CoV-2 collaborations.
galaxy-platform
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
2024-04-09 18:59:25.010332+00:00
https://doi.org/10.5194/egusphere-egu24-8343
2024-04-09 18:57:09.049029+00:00
2024-04-09 18:57:10.780238+00:00
EGU abstract submitted.
Abstract EGU24-8343 (poster)
2024-04-09 18:57:09.049029+00:00
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
https://usegalaxy.eu/u/vstoeckl/w/icenet
2024-04-09 18:52:16.320626+00:00
2024-04-09 18:52:18.165150+00:00
Galaxy workflow on the Galaxy Europe instance. To execute it, you would need first to get an account on Galaxy Europe (free of charge) and prepare the input dataset.
galaxy
Galaxy Workflow IceNet sea-ice forecasting
2024-04-09 18:52:16.320626+00:00
False
2024-04-19 13:34:23.698072+00:00
71504310
https://api.rohub.org/api/ros/aab53e25-a351-46b0-bcfe-a0e0bf02f881/crate/download/
2024-04-09 18:50:15.660054+00:00
2025-10-16 12:30:50.220761+00:00
2024-04-09 18:50:15.660054+00:00
This Research Object corresponds to the work done by Vanessa Stoeckl, and presented as a poster at EGU 2024, ESSI 2.9 "Seamless transitioning between HPC and cloud in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO".
- Abstract submitted and accepted at EGU: [https://doi.org/10.5194/egusphere-egu24-8343](https://doi.org/10.5194/egusphere-egu24-8343)
- [Rendered Jupyter notebook](https://edsbook.org/notebooks/gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/notebook)
- [Galaxy workflow showcasing the pipeline for forecasting sea ice](https://usegalaxy.eu/u/vstoeckl/w/icenet)
application/ld+json
https://w3id.org/ro-id/aab53e25-a351-46b0-bcfe-a0e0bf02f881
Implementation of a reproducible pipeline for forecasting sea ice
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Stoeckl, Vanessa, Alejandro Coca-Castro, Anne Fouilloux, Björn Grüning, and Jean Iaquinta. "Implementation of a reproducible pipeline for forecasting sea ice." ROHub. Apr 09 ,2024. https://w3id.org/ro-id/aab53e25-a351-46b0-bcfe-a0e0bf02f881.
output
input
biblio
tool
10.24424/tckn-et23
323417298
https://api.rohub.org/api/resources/008ec622-14d5-4327-889a-8dbb4d936fcd/download/
2024-04-12 19:22:32.134693+00:00
2024-04-12 20:21:48.156415+00:00
video/mp4
Presentation
2024-04-12 19:22:32.134693+00:00
1473306
https://api.rohub.org/api/resources/4deba7c2-7a08-43b3-9c3f-94a564134152/download/
2024-04-12 19:24:37.138056+00:00
2024-04-12 19:24:38.736332+00:00
application/pdf
Presentation slides
2024-04-12 19:24:37.138056+00:00
772547
https://api.rohub.org/api/resources/7e5193b9-8057-4afc-8dab-cfc472a3c4da/download/
2024-04-09 19:02:15.319953+00:00
2024-04-09 19:02:18.044784+00:00
Poster EGU 2024 (pdf) Implementation of a reproducible pipeline for producing seasonal Arctic sea ice forecasts
application/pdf
Poster
Poster EGU 2024 (pdf)
2024-04-09 19:02:15.319953+00:00
1260982
https://api.rohub.org/api/resources/dd867f4d-c2e3-43a2-9e3c-5ba3d5148423/download/
2024-04-11 11:31:09.064376+00:00
2024-04-11 11:31:12.220619+00:00
Sketch used in RoHub to illustrate the Research Object created for the poster at EGU 2024.
image/png
sketch (based on the poster)
2024-04-11 11:31:09.064376+00:00
https://w3id.org/ro-id/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef
2024-04-09 18:54:45.057065+00:00
2024-04-09 18:57:28.968816+00:00
Research Object with the Jupyter Notebook showcasing Sea ice forecasting in the Environmental Data Science book [https://edsbook.org/welcome.html](https://edsbook.org/welcome.html)
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book
2024-04-09 18:54:45.057065+00:00
poster
2.1474588403722263
3.0
Implementation of a reproducible pipeline for forecasting sea ice
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Science and technology
workflow
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Einet Galaxy
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6.3
geosciences
36.61731769463545
0.4983392357826233
work
5.368647100930566
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Hardware
Economy, business and finance/Economic sector/Computing and information technology/Hardware
implementation
5.082319255547603
7.1
Internet
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impact
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sea ice forecasting
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11.9
motivation impact
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National Oceanic and Atmospheric Administration
Research Object
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environment
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Wireless technology
Economy, business and finance/Economic sector/Computing and information technology/Wireless technology
Weather
Weather
sociology
15.053763440860214
1.4
Oil and gas - upstream activities
Economy, business and finance/Economic sector/Energy and resource/Oil and gas - upstream activities
physical geography and environmental geoscience
100.0
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job market
15.053763440860214
1.4
Climate change
Environment/Climate change
Einet Galaxy
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photo
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motivation involvement
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motivation
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6.0
deep learning
probabilistic sea ice forecasting
outperforms dynamical models
7.884097035040431
11.7
forecasting sea ice
25.628140703517587
35.7
geosciences
63.38268230536455
0.8625994324684143
Implementation of a reproducible pipeline for forecasting sea ice.
19.20485175202156
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Arctic Zone
Galaxy http
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oceanography
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Motivation impacts exceed local environments, populations and economies
need for climate change
research
accurate seasonal Arctic
sea ice forecasts with IceNet:
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26.8
abstraction
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5.5
software
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earth sciences
100.0
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Earth Modeling
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geophysics
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0.8625994324684143
pipeline
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sea ice
18.396564065855404
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implementation
6.1922365988909425
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approach PANGEO
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19.7
reproducible pipeline
10.050251256281406
14.0
This Research Object corresponds to the work done by Vanessa Stoeckl, and presented as a poster at EGU 2024, ESSI 2.9 "Seamless transitioning between HPC and cloud in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO".
- Abstract submitted and accepted at EGU: [https://doi.org/10.5194/egusphere-egu24-8343](https://doi.org/10.5194/egusphere-egu24-8343)
- [Rendered Jupyter notebook](https://edsbook.org/notebooks/gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/notebook)
- [Galaxy workflow showcasing the pipeline for forecasting sea ice](https://usegalaxy.eu/u/vstoeckl/w/icenet)
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Unsplash
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research
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forecast
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19.5
Galaxy workflow
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http
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environment
5.6377079482439925
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work
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computer science
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EGU
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sea ice
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pipeline
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The Alan Turing Institute
acoca@turing.ac.uk
Alejandro Coca-Castro
bjoern.gruening@gmail.com
Björn Grüning
vanessa-tamara@web.de
Vanessa Stoeckl
Meteorology
Applied sciences
Climatology
https://j34ni.github.io/UHI-Stream/UHI-create-movie.html
2024-09-12 12:09:44.304182+00:00
2024-09-12 12:09:46.125931+00:00
This HTML page shows the HTML webpage of the rendered Jupyter notebook.
text/html
Urban Heat Island Effect Changes (rendered HTML notebook)
2024-09-12 12:09:44.304182+00:00
Simula Research Laboratory
annef@simula.no
Anne Fouilloux
0000-0002-1784-2920
jeani@uio.no
Jean Iaquinta
0000-0002-8763-1643
https://raw.githubusercontent.com/j34ni/UHI-Stream/main/notebook/UHI-create-movie.ipynb
2024-09-12 12:07:29.065021+00:00
2024-09-12 12:07:30.283486+00:00
Jupyter notebook to create a movie highlight the Urban heat island effect over a defined period of time.
Urban Heat Island Effect Changes (Jupyter Notebook)
2024-09-12 12:07:29.065021+00:00
NICEST-2 - the second phase of the Nordic Collaboration on e-Infrastructures for Earth System Modeling focuses on strengthening the Nordic position within climate modeling by leveraging, reinforcing and complementing ongoing initiatives.
Nordic Collaboration on e-Infrastructures for Earth System Modeling Tools
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2024-04-18 15:03:25.200841+00:00
The term "Urban Heat Island" (UHI) effect describes the phenomenon where urban environments exhibit higher air temperatures than their rural counterparts, a difference that is especially pronounced at night. This effect arises from the greater capacity of urban materials and man-made structures, such as buildings and pavements, to absorb, store, and then re-radiate heat compared to natural landscapes.
First identified over two centuries ago, the UHI effect is subject of research to understand, measure, and mitigate its impacts on society, economic activities, and public health. Although traditionally the prerogative of specialists, the UHI is also attracting increasing interest among citizens. However, not all have the necessary technical expertise or infrastructure access to source relevant data (from in-situ measurements, satellite remote sensing, or numerical models), process it efficiently, synthesize it and interpret the changes over time or between different locations.
The UHI-Stream tool was specifically developed to bridge this gap and quickly analyze temperature differences between two points anywhere on Earth's by leveraging EGI compute and storage resources (owned by CESNET) and ERA5-Land reanalysis data (available from 1950, as part of the Copernicus Climate Change Service). The corresponding hourly 2m air temperatures are streamed from S3 buckets, processed on-the-fly and visualized as annual heat-maps or animations spanning user-defined time-frames.
Conveniently hosted on [RoHub][1] as a FAIR (Findable, Accessible, Interoperable, and Reusable) Executable Research Object, UHI-Stream is expected to be further converted into a Galaxy tool with a Graphical User Interface as part of the [EuroScienceGateway][2] project, potentially incorporating additional features to help users pinpoint representative urban and adjacent rural areas, or account for more grid cells.
In summary, UHI-Stream is poised to become a valuable asset in urban climatology studies, enabling easier identification of UHI patterns and estimating climate impacts on a regional scale. The tool’s versatility in analyzing any two geographic points enhances its usefulness beyond the mere urban-rural context, allowing for comparative analyses of temperature changes across diverse locales, regardless of their relationship.
[1]: http://www.rohub.org
[2]: http://www.eurosciencegateway.eu
application/ld+json
https://w3id.org/ro-id/d640e4aa-63bf-4aac-b579-eef79f1da470
ERA5-land
Urban Heat Island
heat-map
temperatures
UHI-Stream: A User-Friendly, Cloud-Based Tool for Rapid Analysis of Urban Heat Island Effect Changes Anywhere On Earth
MANUAL
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Fouilloux, Anne, and Jean Iaquinta. "UHI-Stream: A User-Friendly, Cloud-Based Tool for Rapid Analysis of Urban Heat Island Effect Changes Anywhere On Earth." ROHub. Apr 18 ,2024. https://w3id.org/ro-id/d640e4aa-63bf-4aac-b579-eef79f1da470.
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This Research Object corresponds to the work done by Vanessa Stoeckl, and presented as a poster at EGU 2024, ESSI 2.9 "Seamless transitioning between HPC and cloud in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO".
- Abstract submitted and accepted at EGU: [https://doi.org/10.5194/egusphere-egu24-8343](https://doi.org/10.5194/egusphere-egu24-8343)
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Stoeckl, Vanessa, Alejandro Coca-Castro, Anne Fouilloux, Björn Grüning, and Jean Iaquinta. "Implementation of a reproducible pipeline for forecasting sea ice." ROHub. Apr 09 ,2024. https://doi.org/10.24424/vpkn-k902.
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Galaxy workflow on the Galaxy Europe instance. To execute it, you would need first to get an account on Galaxy Europe (free of charge) and prepare the input dataset.
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https://doi.org/10.1093/nar/gkac247
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Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute to the project, with support from multiple national infrastructure providers that enable freely accessible analysis and training services. The Galaxy Training Network supports free, self-directed, virtual training with >230 integrated tutorials. Project engagement metrics have continued to grow over the last 2 years, including source code contributions, publications, software packages wrapped as tools, registered users and their daily analysis jobs, and new independent specialized servers. Key Galaxy technical developments include an improved user interface for launching large-scale analyses with many files, interactive tools for exploratory data analysis, and a complete suite of machine learning tools. Important scientific developments enabled by Galaxy include Vertebrate Genome Project (VGP) assembly workflows and global SARS-CoV-2 collaborations.
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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
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https://doi.org/10.5194/egusphere-egu24-8343
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EGU abstract submitted.
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Research Object with the Jupyter Notebook showcasing Sea ice forecasting in the Environmental Data Science book [https://edsbook.org/welcome.html](https://edsbook.org/welcome.html)
Sea ice forecasting using IceNet (Jupyter Notebook) published in the Environmental Data Science book
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This Research Object corresponds to the work done by Vanessa Stoeckl, and presented as a poster at EGU 2024, ESSI 2.9 "Seamless transitioning between HPC and cloud in support of Earth Observation, Earth Modeling and community-driven Geoscience approach PANGEO".
- Abstract submitted and accepted at EGU: [https://doi.org/10.5194/egusphere-egu24-8343](https://doi.org/10.5194/egusphere-egu24-8343)
- [Rendered Jupyter notebook](https://edsbook.org/notebooks/gallery/ac327c3a-5264-40a2-8c6e-1e8d7c4b37ef/notebook)
- [Galaxy workflow showcasing the pipeline for forecasting sea ice](https://usegalaxy.eu/u/vstoeckl/w/icenet)
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Related publication of the modelling presented in the Jupyter notebook
Seasonal Arctic sea ice forecasting with probabilistic deep learning
2024-07-01 20:52:15.912724+00:00
https://doi.org/10.5281/zenodo.12612126
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2024-07-01 20:52:14.667227+00:00
Contains outputs, (results), generated in the Jupyter notebook of Sea ice forecasting using the IceNet library
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Contains input Codebase of the IceNet library used in the Jupyter notebook of Sea ice forecasting using the IceNet library
Input Codebase of the IceNet library
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Princeton University
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2024-07-01 20:51:10.634302+00:00
2025-10-16 12:30:04.835020+00:00
2024-07-01 20:51:10.634302+00:00
The research object refers to the Sea ice forecasting using the IceNet library notebook published in the Environmental Data Science book.
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https://w3id.org/ro-id/c9df67a3-0d77-4029-8556-e62fcc95a35b
Sea ice forecasting using the IceNet library (Jupyter Notebook) published in the Environmental Data Science book
MANUAL
https://w3id.org/ro/terms/earth-science#ExecutableResearchObjectTemplate
Bryn Noel Ubald, James Byrne, William Gregory, and Wei Ji. "Sea ice forecasting using the IceNet library (Jupyter Notebook) published in the Environmental Data Science book." ROHub. Jul 01 ,2024. https://w3id.org/ro-id/c9df67a3-0d77-4029-8556-e62fcc95a35b.
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https://api.rohub.org/api/resources/2e7fe50f-857f-4ef8-9bc3-eca023827378/download/
2024-07-01 20:52:05.318259+00:00
2024-07-01 20:52:06.922426+00:00
image/png
Image showing an example of the forecasted sea ice
2024-07-01 20:52:05.318259+00:00
Computational notebooks community focused on Environmental Data Science
environmental.ds.book@gmail.com
Environmental Data Science Book Community
https://github.com/alan-turing-institute/environmental-ds-book/issues/new/choose
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Economy, business and finance/Economic sector/Media/Book industry
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sea ice forecasting
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The research object refers to the Sea ice forecasting using the IceNet library notebook published in the Environmental Data Science book.
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